Title : Reducing Artifactual EGFR T790M Mutations in DNA from Formalin-Fixed Paraffin-Embedded Tissue by Use of Thymine-DNA Glycosylase.

Pub. Date : 2017 Sep

PMID : 28720682






5 Functional Relationships(s)
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1 Reducing Artifactual EGFR T790M Mutations in DNA from Formalin-Fixed Paraffin-Embedded Tissue by Use of Thymine-DNA Glycosylase. Formaldehyde epidermal growth factor receptor Homo sapiens
2 BACKGROUND: False-positive EGFR T790M mutations have been reported in formalin-fixed lung tumors, but the cause of the false positives has not been identified. Formaldehyde epidermal growth factor receptor Homo sapiens
3 RESULTS: Artifactual EGFR T790M mutations were detected in all of the archival formalin-fixed normal lung and lung squamous cell carcinomas at mutant allele frequencies of 1% or lower. Formaldehyde epidermal growth factor receptor Homo sapiens
4 Pretreatment of the formalin-fixed DNA with either UDG or TDG reduced the false EGFR T790M mutations, but a greater reduction was seen with the TDG treatment. Formaldehyde epidermal growth factor receptor Homo sapiens
5 CONCLUSIONS: Both U:G and T:G lesions in formalin-fixed tissue are sources of false-positive EGFR T790M mutations. Formaldehyde epidermal growth factor receptor Homo sapiens