PMID-sentid	Pub_year	Sent_text	comp_official_name	comp_offset	protein_name	organism	prot_offset
12536147-5	2003	In the mutant of the Reb1p-binding site, induction by galactose/Gal4p restores a nucleosome-free state to an extent resembling the GCY1 wild-type promoter, showing that, in principle, activated Gal4p can exclude nucleosomes on its own.	Galactose	54-63	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	21-26
17942904-11	2007	However, REB1 and RAP1 transcriptional regulators were common to only arsenate- and arsenite-sensitive genes, respectively.	arsenic acid	70-78	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	9-13
17942904-11	2007	However, REB1 and RAP1 transcriptional regulators were common to only arsenate- and arsenite-sensitive genes, respectively.	arsenite	84-92	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	9-13
9613577-0	1998	Datin, a yeast poly(dA:dT)-binding protein, behaves as an activator of the wild-type ILV1 promoter and interacts synergistically with Reb1p.	Datin	0-5	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	134-139
11706001-3	2002	The existence of a second A*T-rich element (25 As out of 33 nucleotides) present six base pairs upstream of the Reb1p-binding site, suggested that nucleosome exclusion from the hypersensitive site in the ILV1 promoter region might be dictated by synergistic action of the two poly(dA*dT) elements.	Poly dA-dT	276-287	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	112-117
9747705-3	1998	DNase I analysis of the GAL1 upstream activating sequence (UAS(GAL1/10)) showed expected Gal4 activator protein binding during growth in galactose, and also revealed binding of the Reb1 protein (Reb1p) during growth in glucose.	Glucose	219-226	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	195-200
9613577-6	1998	We demonstrate that (i) datin (Dat1p), the only known poly (dA:dT)-binding protein in yeast, specifically binds to the ILV1 poly(dA:dT) element in vitro; (ii) Dat1p functions as a trans-activating factor in the ILV1 context; and (iii) the synergistic activation observed in vivo between the Reb1p site and the poly(dA:dT) element depends on the presence of the structural gene for Dat1p, DAT1.	poly	54-58	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	291-296
9613577-0	1998	Datin, a yeast poly(dA:dT)-binding protein, behaves as an activator of the wild-type ILV1 promoter and interacts synergistically with Reb1p.	poly	15-19	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	134-139
9613577-6	1998	We demonstrate that (i) datin (Dat1p), the only known poly (dA:dT)-binding protein in yeast, specifically binds to the ILV1 poly(dA:dT) element in vitro; (ii) Dat1p functions as a trans-activating factor in the ILV1 context; and (iii) the synergistic activation observed in vivo between the Reb1p site and the poly(dA:dT) element depends on the presence of the structural gene for Dat1p, DAT1.	amsonic acid	129-131	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	291-296
9613577-0	1998	Datin, a yeast poly(dA:dT)-binding protein, behaves as an activator of the wild-type ILV1 promoter and interacts synergistically with Reb1p.	Thymidine	23-25	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	134-139
9613577-6	1998	We demonstrate that (i) datin (Dat1p), the only known poly (dA:dT)-binding protein in yeast, specifically binds to the ILV1 poly(dA:dT) element in vitro; (ii) Dat1p functions as a trans-activating factor in the ILV1 context; and (iii) the synergistic activation observed in vivo between the Reb1p site and the poly(dA:dT) element depends on the presence of the structural gene for Dat1p, DAT1.	Thymidine	132-134	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	291-296
9613577-6	1998	We demonstrate that (i) datin (Dat1p), the only known poly (dA:dT)-binding protein in yeast, specifically binds to the ILV1 poly(dA:dT) element in vitro; (ii) Dat1p functions as a trans-activating factor in the ILV1 context; and (iii) the synergistic activation observed in vivo between the Reb1p site and the poly(dA:dT) element depends on the presence of the structural gene for Dat1p, DAT1.	amsonic acid	60-62	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	291-296
9613577-6	1998	We demonstrate that (i) datin (Dat1p), the only known poly (dA:dT)-binding protein in yeast, specifically binds to the ILV1 poly(dA:dT) element in vitro; (ii) Dat1p functions as a trans-activating factor in the ILV1 context; and (iii) the synergistic activation observed in vivo between the Reb1p site and the poly(dA:dT) element depends on the presence of the structural gene for Dat1p, DAT1.	Thymidine	63-65	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	291-296
9613577-6	1998	We demonstrate that (i) datin (Dat1p), the only known poly (dA:dT)-binding protein in yeast, specifically binds to the ILV1 poly(dA:dT) element in vitro; (ii) Dat1p functions as a trans-activating factor in the ILV1 context; and (iii) the synergistic activation observed in vivo between the Reb1p site and the poly(dA:dT) element depends on the presence of the structural gene for Dat1p, DAT1.	amsonic acid	129-131	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	291-296
9613577-6	1998	We demonstrate that (i) datin (Dat1p), the only known poly (dA:dT)-binding protein in yeast, specifically binds to the ILV1 poly(dA:dT) element in vitro; (ii) Dat1p functions as a trans-activating factor in the ILV1 context; and (iii) the synergistic activation observed in vivo between the Reb1p site and the poly(dA:dT) element depends on the presence of the structural gene for Dat1p, DAT1.	Thymidine	132-134	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	291-296
7975895-0	1994	Defining the sequence specificity of the Saccharomyces cerevisiae DNA binding protein REB1p by selecting binding sites from random-sequence oligonucleotides.	Oligonucleotides	140-156	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	86-91
9016645-6	1997	A recombinant histidine-tagged Reb1 protein bearing the rDNA binding domain has two homologous, sequence-specific binding sites in the S. pomber DNA intergenic spacer, located between 289 and 480 nt downstream of the end of the approximately 25S rRNA coding sequences.	Histidine	14-23	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	31-35
9016611-2	1997	Previous work has shown that the DNA sequence recognized by Reb1p contains an adenosine residue that is unusually reactive toward chemical modification by dimethylsulfate and that methylation of this nucleoside increases the binding affinity of the Reb1p protein for its target.	Adenosine	78-87	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	249-254
9016611-2	1997	Previous work has shown that the DNA sequence recognized by Reb1p contains an adenosine residue that is unusually reactive toward chemical modification by dimethylsulfate and that methylation of this nucleoside increases the binding affinity of the Reb1p protein for its target.	dimethyl sulfate	155-170	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	60-65
9016611-2	1997	Previous work has shown that the DNA sequence recognized by Reb1p contains an adenosine residue that is unusually reactive toward chemical modification by dimethylsulfate and that methylation of this nucleoside increases the binding affinity of the Reb1p protein for its target.	dimethyl sulfate	155-170	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	249-254
9016611-2	1997	Previous work has shown that the DNA sequence recognized by Reb1p contains an adenosine residue that is unusually reactive toward chemical modification by dimethylsulfate and that methylation of this nucleoside increases the binding affinity of the Reb1p protein for its target.	Nucleosides	200-210	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	60-65
9016611-2	1997	Previous work has shown that the DNA sequence recognized by Reb1p contains an adenosine residue that is unusually reactive toward chemical modification by dimethylsulfate and that methylation of this nucleoside increases the binding affinity of the Reb1p protein for its target.	Nucleosides	200-210	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	249-254
8943356-7	1996	The GRF2-binding factor appears to facilitate the binding of proteins to both HSE1 and TATA, as these sequences, while still occupied, are less protected from in vivo dimethyl sulfate methylation in a deltaGRF2 strain.	dimethyl sulfate	167-183	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	4-8
8817483-1	1995	The upstream activation sequence (UAS) in the Saccharomyces cerevisiae actin gene promoter contains three different motifs, specifically two AT-rich tracts, two binding sites for the yeast protein REB1, and an Mlul site.	Phenindione	34-37	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	197-201
8817483-3	1995	The REB1 binding sites were found to be essential for, and sufficient to restore partial, UAS activity.	Phenindione	90-93	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	4-8
8817483-5	1995	Multimerization of a REB1 binding site created a UAS that in galactose is more active, but in glucose less active, than a UAS having a single REB1 site with one AT-rich tract.	Phenindione	49-52	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	21-25
8817483-5	1995	Multimerization of a REB1 binding site created a UAS that in galactose is more active, but in glucose less active, than a UAS having a single REB1 site with one AT-rich tract.	Galactose	61-70	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	21-25
8817483-5	1995	Multimerization of a REB1 binding site created a UAS that in galactose is more active, but in glucose less active, than a UAS having a single REB1 site with one AT-rich tract.	Glucose	94-101	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	21-25
8817483-5	1995	Multimerization of a REB1 binding site created a UAS that in galactose is more active, but in glucose less active, than a UAS having a single REB1 site with one AT-rich tract.	Phenindione	122-125	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	21-25
8817483-5	1995	Multimerization of a REB1 binding site created a UAS that in galactose is more active, but in glucose less active, than a UAS having a single REB1 site with one AT-rich tract.	Phenindione	122-125	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	142-146
9016611-2	1997	Previous work has shown that the DNA sequence recognized by Reb1p contains an adenosine residue that is unusually reactive toward chemical modification by dimethylsulfate and that methylation of this nucleoside increases the binding affinity of the Reb1p protein for its target.	Adenosine	78-87	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	60-65
8144571-4	1994	A binding site for the yeast REB1 protein was identified near the 5" terminus of the ENO1 URS element.	Peptichemio	90-93	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	29-33
8144571-5	1994	Base substitution mutations that disrupted REB1 binding in vitro caused a 30% loss of URS activity in vivo.	Peptichemio	86-89	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	43-47
2204808-2	1990	We report here the cloning of the gene for REB1 by screening a yeast genomic lambda gt11 library with specific oligonucleotides containing the REB1 binding site consensus sequence.	Oligonucleotides	111-127	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	43-47
2204808-2	1990	We report here the cloning of the gene for REB1 by screening a yeast genomic lambda gt11 library with specific oligonucleotides containing the REB1 binding site consensus sequence.	Oligonucleotides	111-127	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	143-147
2181283-5	1990	When oligonucleotides containing a REB1-binding site are placed between the CYC1 upstream activating sequence and TATA box, transcription by RNA polymerase II in vivo is substantially reduced, suggesting that REB1 acts as a repressor of RNA polymerase II transcription.	Oligonucleotides	5-21	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	35-39
2181283-5	1990	When oligonucleotides containing a REB1-binding site are placed between the CYC1 upstream activating sequence and TATA box, transcription by RNA polymerase II in vivo is substantially reduced, suggesting that REB1 acts as a repressor of RNA polymerase II transcription.	Oligonucleotides	5-21	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	209-213
2181283-7	1990	A greater reduction in REB1 activity is observed if the sin3 mutant strain is grown in media containing galactose as a carbon source.	Galactose	104-113	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	23-27
23970552-7	2013	In the presence of cerulenin, an inhibitor of de novo fatty acid synthesis, the dgk1Delta mutant expressing DGK1(reb1) exhibited a significant defect in growth as well as in the synthesis of phospholipids from triacylglycerol mobilization.	Cerulenin	19-28	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	113-117
2181283-7	1990	A greater reduction in REB1 activity is observed if the sin3 mutant strain is grown in media containing galactose as a carbon source.	Carbon	119-125	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	23-27
23970552-7	2013	In the presence of cerulenin, an inhibitor of de novo fatty acid synthesis, the dgk1Delta mutant expressing DGK1(reb1) exhibited a significant defect in growth as well as in the synthesis of phospholipids from triacylglycerol mobilization.	Fatty Acids	54-64	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	113-117
23970552-7	2013	In the presence of cerulenin, an inhibitor of de novo fatty acid synthesis, the dgk1Delta mutant expressing DGK1(reb1) exhibited a significant defect in growth as well as in the synthesis of phospholipids from triacylglycerol mobilization.	Phospholipids	191-204	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	113-117
23970552-7	2013	In the presence of cerulenin, an inhibitor of de novo fatty acid synthesis, the dgk1Delta mutant expressing DGK1(reb1) exhibited a significant defect in growth as well as in the synthesis of phospholipids from triacylglycerol mobilization.	Triglycerides	210-225	DNA-binding protein REB1	Saccharomyces cerevisiae S288C	113-117