PMID-sentid Pub_year Sent_text comp_official_name comp_offsetprotein_name organism prot_offset 3203685-3 1988 Besides this Cys72, proteinase K has two disulfide bonds, Cys34--Cys123 and Cys178--Cys249, which contribute to the stability of the tertiary structure consisting of an extended central parallel beta-sheet decorated by six alpha-helices, three short antiparallel beta-sheets, 18 beta-turns and involving several internal, structurally important water molecules. Water 345-350 endogenous retrovirus group K member 7 Homo sapiens 20-30 3203685-10 1988 Based on these experiments, a reaction mechanism is proposed where the peptide substrate forms a three-stranded antiparallel pleated sheet with the recognition site of proteinase K consisting of Ser132--Leu133--Gly134 on one side and Gly100--Ser101 on the other, followed by expulsion of the oxyanion hole water W335 and hydrolytic cleavage by the Asp39--His69--Serr224 triad. Water 306-311 endogenous retrovirus group K member 7 Homo sapiens 168-178