PMID-sentid Pub_year Sent_text comp_official_name comp_offsetprotein_name organism prot_offset 30431391-1 2019 According to the X-ray crystal structures of CYP17A1 (including its complexes with inhibitors), it is shown that a hydrogen bond exists between CYP17A1 and its inhibitors (such as abiraterone and TOK-001). abiraterone 180-191 cytochrome P450 family 17 subfamily A member 1 Homo sapiens 45-52 30431391-1 2019 According to the X-ray crystal structures of CYP17A1 (including its complexes with inhibitors), it is shown that a hydrogen bond exists between CYP17A1 and its inhibitors (such as abiraterone and TOK-001). abiraterone 180-191 cytochrome P450 family 17 subfamily A member 1 Homo sapiens 144-151 30431391-2 2019 Previous short MD simulations (50 ns) suggested that the binding of abiraterone to CYP17A1 is stronger than that of TOK-001. abiraterone 68-79 cytochrome P450 family 17 subfamily A member 1 Homo sapiens 83-90 30431391-3 2019 In this work, by carrying out long atomistic MD simulations (200 ns) of CYP17A1 and its complexes with abiraterone and TOK-001, we observed a binding mode between CYP17A1 and abiraterone, which is different from the binding mode between CYP17A1 and TOK-001. abiraterone 103-114 cytochrome P450 family 17 subfamily A member 1 Homo sapiens 72-79 30431391-3 2019 In this work, by carrying out long atomistic MD simulations (200 ns) of CYP17A1 and its complexes with abiraterone and TOK-001, we observed a binding mode between CYP17A1 and abiraterone, which is different from the binding mode between CYP17A1 and TOK-001. abiraterone 103-114 cytochrome P450 family 17 subfamily A member 1 Homo sapiens 163-170 30431391-3 2019 In this work, by carrying out long atomistic MD simulations (200 ns) of CYP17A1 and its complexes with abiraterone and TOK-001, we observed a binding mode between CYP17A1 and abiraterone, which is different from the binding mode between CYP17A1 and TOK-001. abiraterone 103-114 cytochrome P450 family 17 subfamily A member 1 Homo sapiens 163-170 30431391-3 2019 In this work, by carrying out long atomistic MD simulations (200 ns) of CYP17A1 and its complexes with abiraterone and TOK-001, we observed a binding mode between CYP17A1 and abiraterone, which is different from the binding mode between CYP17A1 and TOK-001. abiraterone 175-186 cytochrome P450 family 17 subfamily A member 1 Homo sapiens 72-79 30431391-3 2019 In this work, by carrying out long atomistic MD simulations (200 ns) of CYP17A1 and its complexes with abiraterone and TOK-001, we observed a binding mode between CYP17A1 and abiraterone, which is different from the binding mode between CYP17A1 and TOK-001. abiraterone 175-186 cytochrome P450 family 17 subfamily A member 1 Homo sapiens 163-170 30431391-3 2019 In this work, by carrying out long atomistic MD simulations (200 ns) of CYP17A1 and its complexes with abiraterone and TOK-001, we observed a binding mode between CYP17A1 and abiraterone, which is different from the binding mode between CYP17A1 and TOK-001. abiraterone 175-186 cytochrome P450 family 17 subfamily A member 1 Homo sapiens 163-170 30431391-4 2019 In the case of abiraterone binding, the unfilled volume in the active site cavity increases the freedom of movement of abiraterone within CYP17A1, leading to the collective motions of the helices G and B" as well as the breaking of hydrogen bond existing between the 3beta-OH group of abiraterone and N202 of CYP17A1. abiraterone 15-26 cytochrome P450 family 17 subfamily A member 1 Homo sapiens 138-145 30431391-4 2019 In the case of abiraterone binding, the unfilled volume in the active site cavity increases the freedom of movement of abiraterone within CYP17A1, leading to the collective motions of the helices G and B" as well as the breaking of hydrogen bond existing between the 3beta-OH group of abiraterone and N202 of CYP17A1. abiraterone 15-26 cytochrome P450 family 17 subfamily A member 1 Homo sapiens 309-316 30431391-4 2019 In the case of abiraterone binding, the unfilled volume in the active site cavity increases the freedom of movement of abiraterone within CYP17A1, leading to the collective motions of the helices G and B" as well as the breaking of hydrogen bond existing between the 3beta-OH group of abiraterone and N202 of CYP17A1. abiraterone 119-130 cytochrome P450 family 17 subfamily A member 1 Homo sapiens 138-145 30431391-4 2019 In the case of abiraterone binding, the unfilled volume in the active site cavity increases the freedom of movement of abiraterone within CYP17A1, leading to the collective motions of the helices G and B" as well as the breaking of hydrogen bond existing between the 3beta-OH group of abiraterone and N202 of CYP17A1. abiraterone 119-130 cytochrome P450 family 17 subfamily A member 1 Homo sapiens 309-316 30431391-4 2019 In the case of abiraterone binding, the unfilled volume in the active site cavity increases the freedom of movement of abiraterone within CYP17A1, leading to the collective motions of the helices G and B" as well as the breaking of hydrogen bond existing between the 3beta-OH group of abiraterone and N202 of CYP17A1. abiraterone 119-130 cytochrome P450 family 17 subfamily A member 1 Homo sapiens 138-145 30431391-4 2019 In the case of abiraterone binding, the unfilled volume in the active site cavity increases the freedom of movement of abiraterone within CYP17A1, leading to the collective motions of the helices G and B" as well as the breaking of hydrogen bond existing between the 3beta-OH group of abiraterone and N202 of CYP17A1. abiraterone 119-130 cytochrome P450 family 17 subfamily A member 1 Homo sapiens 309-316 30431391-6 2019 By pulling the two inhibitors (abiraterone and TOK-001) out of the binding pocket in CYP17A1, we discovered that abiraterone and TOK-001 were moved from their binding sites to the surface of protein similarly through the channels formed by the helices G and B". abiraterone 31-42 cytochrome P450 family 17 subfamily A member 1 Homo sapiens 85-92 30431391-6 2019 By pulling the two inhibitors (abiraterone and TOK-001) out of the binding pocket in CYP17A1, we discovered that abiraterone and TOK-001 were moved from their binding sites to the surface of protein similarly through the channels formed by the helices G and B". abiraterone 113-124 cytochrome P450 family 17 subfamily A member 1 Homo sapiens 85-92 30431391-7 2019 In addition, based on the free energy calculations, one can see that it is energetically favorable for the two inhibitors (abiraterone and TOK-001) to enter into the binding pocket in CYP17A1. abiraterone 123-134 cytochrome P450 family 17 subfamily A member 1 Homo sapiens 184-191