PMID-sentid	Pub_year	Sent_text	compound_name	comp_offset	prot_official_name	organism	prot_offset
7971966-2	1994	Rat UR/human retinoid X receptor alpha (hRXR alpha) heterodimers bound preferentially to double-stranded oligonucleotide direct repeats having the consensus half-site sequence AGGTCA and 4-nt spacing (DR-4).	double-stranded oligonucleotide	89-120	retinoid X receptor alpha	Homo sapiens	40-50
15319300-5	2004	When the excision repair activity towards double-stranded oligonucleotide containing a Tg:A base pair was compared among six types of recombinant NEIL1 proteins, p.Glu28del-type NEIL1, found in a primary case, was found to exhibit an extremely low activity level.	double-stranded oligonucleotide	42-73	nei like DNA glycosylase 1	Homo sapiens	178-183
15240803-6	2004	Double-stranded oligonucleotide decoys selectively alter levels of endogenous GABA(B)R1a and GABA(B)R1b in primary hippocampal neurons, and CREB knock-out mice show changes in levels of GABA(B)R1a and GABA(B)R1b transcripts, consistent with decoy competition experiments.	double-stranded oligonucleotide	0-31	gamma-aminobutyric acid (GABA) B receptor, 1	Mus musculus	78-87
9105670-5	1997	Antibodies against COUP-TF beta/ARP-1 and RXR transcription factors altered the pattern seen on electrophoretic mobility shift assays using double-stranded oligonucleotide containing the exon 1 protein binding site.	double-stranded oligonucleotide	140-171	nuclear receptor subfamily 2 group F member 2	Homo sapiens	19-31
9105670-5	1997	Antibodies against COUP-TF beta/ARP-1 and RXR transcription factors altered the pattern seen on electrophoretic mobility shift assays using double-stranded oligonucleotide containing the exon 1 protein binding site.	double-stranded oligonucleotide	140-171	nuclear receptor subfamily 2 group F member 2	Homo sapiens	32-37
9105670-5	1997	Antibodies against COUP-TF beta/ARP-1 and RXR transcription factors altered the pattern seen on electrophoretic mobility shift assays using double-stranded oligonucleotide containing the exon 1 protein binding site.	double-stranded oligonucleotide	140-171	retinoid X receptor alpha	Homo sapiens	42-45
9077477-7	1997	Two nuclear retinoid receptors that were expressed in bacteria, retinoic acid receptor-gamma and retinoid X receptor-alpha, were found to bind specifically to a double-stranded oligonucleotide containing the RARE in gel mobility shift assays.	double-stranded oligonucleotide	161-192	retinoic acid receptor, gamma	Rattus norvegicus	64-122
15268801-3	2004	Assessment of NF-kappaB DNA binding activity was performed by electrophoretic mobility shift assay (EMSA) using digoxin labeled double-stranded oligonucleotide containing kappa B consensus sequence.	double-stranded oligonucleotide	128-159	nuclear factor kappa B subunit 1	Homo sapiens	14-23
11788788-8	2001	Using gel-shift assays and double-stranded oligonucleotide consensus sequences of the known transcription factor binding sites of the ICAM-1 promoter, Sp1 and AP-1 were identified as transcriptional activators of IL-1beta-driven ICAM-1 expression.	double-stranded oligonucleotide	27-58	intercellular adhesion molecule 1	Homo sapiens	134-140
11788788-8	2001	Using gel-shift assays and double-stranded oligonucleotide consensus sequences of the known transcription factor binding sites of the ICAM-1 promoter, Sp1 and AP-1 were identified as transcriptional activators of IL-1beta-driven ICAM-1 expression.	double-stranded oligonucleotide	27-58	interleukin 1 beta	Homo sapiens	213-221
11788788-8	2001	Using gel-shift assays and double-stranded oligonucleotide consensus sequences of the known transcription factor binding sites of the ICAM-1 promoter, Sp1 and AP-1 were identified as transcriptional activators of IL-1beta-driven ICAM-1 expression.	double-stranded oligonucleotide	27-58	intercellular adhesion molecule 1	Homo sapiens	229-235
11461961-4	2001	NMDA receptor-mediated neuroprotection was blocked when cerebellar neurons were transfected with a double-stranded oligonucleotide containing the BDNF gene NF-kappaB sequence.	double-stranded oligonucleotide	99-130	brain-derived neurotrophic factor	Rattus norvegicus	146-150
1864363-5	1991	Addition of excess beta element (double-stranded oligonucleotide) to a cell-free transcription system reduces transcription of the ribosomal protein L32 gene.	double-stranded oligonucleotide	33-64	ribosomal protein L32	Mus musculus	131-152