PMID-sentid Pub_year Sent_text compound_name comp_offset prot_official_name organism prot_offset 6160581-7 1980 In all of these systems, dNMP incorporation catalyzed by DNA polymerase beta was sensitive to N-ethylmaleimide; however, this polymerase activity was resistant to N-ethylmaleimide with poly(rA) x (dT) as the primer template. dnmp 25-29 DNA polymerase beta Homo sapiens 57-76 35259189-3 2022 Then a residue in the central epsilon bulge directs the covalent linkage of a complementary dNMP to a Tyr sidechain in P protein s Terminal Protein (TP) domain. dnmp 92-96 OCA2 melanosomal transmembrane protein Homo sapiens 119-128 3657780-1 1987 The modification of the human placenta DNA polymerase alpha by the imidazolides of dNMP was investigated. dnmp 83-87 DNA polymerase alpha 1, catalytic subunit Homo sapiens 39-59 775445-1 1976 Terminal deoxynucleotidyl transferase, which requires a single-stranded DNA primer under the usual assay conditions, can be made to accept double-stranded DNA as primer for the addition of either rNMP or dNMP, if Mg+2 ion is replaced by Co+2 ion. dnmp 204-208 DNA nucleotidylexotransferase Homo sapiens 0-37 765970-1 1976 Terminal deoxynucleotidyl transferase, which requires a single-stranded DNA primer under the usual assay conditions, can be made to accept double-stranded DNA as primer for the addition of either rNMP or dNMP, if Mg+2 ion is replaced by Co+2 ion. dnmp 204-208 DNA nucleotidylexotransferase Homo sapiens 0-37 30633249-0 2018 [Excision of Carbohydrate-Modified dNMP Analogues from DNA 3" end by Human Apurinic/Apyrimidinic Endonuclease 1 (APE1) and Tyrosyl-DNA Phosphodiesterase 1 (TDP1)]. dnmp 35-39 apurinic/apyrimidinic endodeoxyribonuclease 1 Homo sapiens 75-111 30633249-0 2018 [Excision of Carbohydrate-Modified dNMP Analogues from DNA 3" end by Human Apurinic/Apyrimidinic Endonuclease 1 (APE1) and Tyrosyl-DNA Phosphodiesterase 1 (TDP1)]. dnmp 35-39 apurinic/apyrimidinic endodeoxyribonuclease 1 Homo sapiens 113-117 30633249-0 2018 [Excision of Carbohydrate-Modified dNMP Analogues from DNA 3" end by Human Apurinic/Apyrimidinic Endonuclease 1 (APE1) and Tyrosyl-DNA Phosphodiesterase 1 (TDP1)]. dnmp 35-39 tyrosyl-DNA phosphodiesterase 1 Homo sapiens 123-154 30633249-0 2018 [Excision of Carbohydrate-Modified dNMP Analogues from DNA 3" end by Human Apurinic/Apyrimidinic Endonuclease 1 (APE1) and Tyrosyl-DNA Phosphodiesterase 1 (TDP1)]. dnmp 35-39 tyrosyl-DNA phosphodiesterase 1 Homo sapiens 156-160 30633249-3 2018 Both APE1 and TDP1 are more efficient in removing ribose-modified dNMP residues from mismatched pairs rather than canonical pairs. dnmp 66-70 apurinic/apyrimidinic endodeoxyribonuclease 1 Homo sapiens 5-9 30633249-3 2018 Both APE1 and TDP1 are more efficient in removing ribose-modified dNMP residues from mismatched pairs rather than canonical pairs. dnmp 66-70 tyrosyl-DNA phosphodiesterase 1 Homo sapiens 14-18 24260472-1 2013 The gene dnph1 (or rcl) encodes a hydrolase that cleaves the 2"-deoxyribonucleoside 5"-monophosphate (dNMP) N-glycosidic bond to yield a free nucleobase and 2-deoxyribose 5-phosphate. dnmp 102-106 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 Homo sapiens 9-14 27129632-11 2016 The AP site in DDE-DNA can be repaired in an apurinic/apyrimidinic endonuclease-independent manner via the successive action of Ku (cleavage of the AP site), tyrosyl-DNA phosphodiesterase 1 (removal of the 3"-deoxyribose residue), polynucleotide kinase 3"-phosphatase (removal of the 3"-phosphate), DNA polymerase beta (incorporation of dNMP), and DNA ligase (sealing the nick). dnmp 337-341 tyrosyl-DNA phosphodiesterase 1 Homo sapiens 158-189 27129632-11 2016 The AP site in DDE-DNA can be repaired in an apurinic/apyrimidinic endonuclease-independent manner via the successive action of Ku (cleavage of the AP site), tyrosyl-DNA phosphodiesterase 1 (removal of the 3"-deoxyribose residue), polynucleotide kinase 3"-phosphatase (removal of the 3"-phosphate), DNA polymerase beta (incorporation of dNMP), and DNA ligase (sealing the nick). dnmp 337-341 polynucleotide kinase 3'-phosphatase Homo sapiens 231-267 27129632-11 2016 The AP site in DDE-DNA can be repaired in an apurinic/apyrimidinic endonuclease-independent manner via the successive action of Ku (cleavage of the AP site), tyrosyl-DNA phosphodiesterase 1 (removal of the 3"-deoxyribose residue), polynucleotide kinase 3"-phosphatase (removal of the 3"-phosphate), DNA polymerase beta (incorporation of dNMP), and DNA ligase (sealing the nick). dnmp 337-341 DNA polymerase beta Homo sapiens 299-318 18616294-11 2008 To determine if human polymerase eta (hpol eta) might be involved in the mutagenic bypass, an in vitro bypass study of G[8,5-Me]T in the same sequence was carried out, which showed that hpol eta can bypass the cross-link incorporating the correct dNMP opposite each cross-linked base. dnmp 247-251 endothelin receptor type A Homo sapiens 33-36 22024240-5 2011 Results with this assay suggest that dCMP is the most frequent dNMP inserted opposite uracil-derived AP sites and demonstrate that dCMP insertion absolutely requires the catalytic activity of Rev1. dnmp 63-67 deoxycytidyl transferase Saccharomyces cerevisiae S288C 192-196 21076466-3 2011 We developed a doxycycline (dox)-inducible mouse model, termed DNMP, to inhibit NF-kappaB activity specifically within the mammary epithelium during tumor development in the polyoma middle T oncogene (PyVT) mouse mammary tumor model. dnmp 63-67 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 Mus musculus 80-89 18616294-11 2008 To determine if human polymerase eta (hpol eta) might be involved in the mutagenic bypass, an in vitro bypass study of G[8,5-Me]T in the same sequence was carried out, which showed that hpol eta can bypass the cross-link incorporating the correct dNMP opposite each cross-linked base. dnmp 247-251 endothelin receptor type A Homo sapiens 43-46 18616294-11 2008 To determine if human polymerase eta (hpol eta) might be involved in the mutagenic bypass, an in vitro bypass study of G[8,5-Me]T in the same sequence was carried out, which showed that hpol eta can bypass the cross-link incorporating the correct dNMP opposite each cross-linked base. dnmp 247-251 endothelin receptor type A Homo sapiens 43-46 16489926-9 2006 These reaction conditions are suitable for using photoreactive nicked DNAs bearing 3 -photoreactive dNMP residues for photoaffinity labeling of proteins in cellular/nuclear extracts and model APE1-containing systems. dnmp 100-104 apurinic/apyrimidinic endodeoxyribonuclease 1 Homo sapiens 192-196 16489926-0 2006 3"-5" exonuclease activity of human apurinic/apyrimidinic endonuclease 1 towards DNAs containing dNMP and their modified analogs at the 3 end of single strand DNA break. dnmp 97-101 apurinic/apyrimidinic endodeoxyribonuclease 1 Homo sapiens 36-72 16481227-0 2006 Efficiency of exonucleolytic action of apurinic/apyrimidinic endonuclease 1 towards matched and mismatched dNMP at the 3" terminus of different oligomeric DNA structures correlates with thermal stability of DNA duplexes. dnmp 107-111 apurinic/apyrimidinic endodeoxyribonuclease 1 Homo sapiens 39-75 16489926-6 2006 Photoreactive dNMP residues were incorporated at the 3 end of the lesion using DNA polymerase beta and photoreactive dNTPs. dnmp 14-18 DNA polymerase beta Homo sapiens 79-98 9079789-7 1997 These findings demonstrate a dissociation between the effects of stimulation of pre- and post-synaptic 5-HT1A receptors on performance of a DNMP task although the changes in performance cannot be accounted for by changes in mnemonic function. dnmp 140-144 5-hydroxytryptamine receptor 1A Rattus norvegicus 103-109