PMID-sentid	Pub_year	Sent_text	compound_name	comp_offset	prot_official_name	organism	prot_offset
18638318-0	2008	Bicoid occurrence and Bicoid-dependent hunchback regulation in lower cyclorrhaphan flies.	cyclorrhaphan	69-82	hunchback	Drosophila melanogaster	39-48
25757102-10	2015	The absence of this activatory role provides a precise genetic explanation for the loss of polarity upon bcd knock-down in M. abdita, and suggests a general scenario in which the posterior maternal system is increasingly replaced by the anterior one during the evolution of the cyclorrhaphan dipteran lineage.	cyclorrhaphan	278-291	bicoid	Drosophila melanogaster	105-108
23595982-7	2013	We identified the BMP subclass members dpp and gbb from an early embryonic transcriptome and show that their expression patterns in the blastoderm differ considerably from those seen in cyclorrhaphan flies.	cyclorrhaphan	186-199	glass bottom boat	Drosophila melanogaster	18-21
23595982-9	2013	Our phylogenetic analysis shows these to be clear orthologues of dpp and gbb from other non-cyclorrhaphan insects, with C. albipunctata gbb branching ancestrally to the cyclorrhaphan gbb/scw split.	cyclorrhaphan	92-105	glass bottom boat	Drosophila melanogaster	73-76
23595982-11	2013	We conclude that the gbb/scw duplication occurred between the separation of the lineage leading to Brachycera and the origin of cyclorrhaphan flies 200-150 Ma ago.	cyclorrhaphan	128-141	glass bottom boat	Drosophila melanogaster	21-24
24321690-7	2014	These results suggest that Dtg was recruited as a new component of the network that controls dorsal ectoderm patterning in the lineage leading to higher Cyclorrhaphan flies, such as D. melanogaster and M. domestica.	cyclorrhaphan	153-166	Dpp target gene	Drosophila melanogaster	27-30
22874914-11	2012	We propose that changes in the BMP activity profile at the beginning of gastrulation might have contributed to the reduction of extra-embryonic tissue types during the radiation of cyclorrhaphan flies.	cyclorrhaphan	181-194	glass bottom boat	Drosophila melanogaster	31-34
18638318-9	2008	Furthermore, we report the expression of lacZ reporter constructs under the control of hunchback regulatory sequences from a range of lower cyclorrhaphan and non-cyclorrhaphan flies in transgenic Drosophila embryos.	cyclorrhaphan	140-153	hunchback	Drosophila melanogaster	87-96
18638318-9	2008	Furthermore, we report the expression of lacZ reporter constructs under the control of hunchback regulatory sequences from a range of lower cyclorrhaphan and non-cyclorrhaphan flies in transgenic Drosophila embryos.	cyclorrhaphan	162-175	hunchback	Drosophila melanogaster	87-96
18172205-0	2008	Evolutionary origin of the amnioserosa in cyclorrhaphan flies correlates with spatial and temporal expression changes of zen.	cyclorrhaphan	42-55	zerknullt	Drosophila melanogaster	121-124
18214532-6	2008	For another lower cyclorrhaphan fly (Lonchoptera) and two related outgroup taxa of Cyclorrhapha (Empis, Haematopota), we report maternal cad expression in ovarian follicles.	cyclorrhaphan	18-31	caudal	Drosophila melanogaster	137-140
12355266-2	2002	However, in the higher Diptera (cyclorrhaphan flies), a class of proteins homologous to lipoprotein lipases called yolk polypeptides (YP) are accumulated by oocytes instead of Vg, which is not produced at all.	cyclorrhaphan	32-45	putative uncharacterized protein LOC400499	Homo sapiens	176-178