PMID-sentid	Pub_year	Sent_text	compound_name	comp_offset	prot_official_name	organism	prot_offset
28868064-2	2017	In this report, similar to the inducing effects of exogenously applied hydrogen peroxide (H2O2), we discovered that beta-CDH elicited RBOH1 transcript upregulation, endogenous H2O2 accumulation, and thereafter tomato LR development.	beta-cdh	116-124	NADPH oxidase	Solanum lycopersicum	134-139
27543888-7	2016	Upon beta-CDH treatment, the changes of endogenous GSH content determined by spectrophotography and fluorescent analysis were consistent with the transcripts of two GSH synthetic genes, GSH1 and GSH2 encoding gamma-glutamyl cysteine synthetase and glutathione synthetase, respectively.	beta-cdh	5-13	glutamate--cysteine ligase, chloroplastic	Solanum lycopersicum	186-190
27543888-7	2016	Upon beta-CDH treatment, the changes of endogenous GSH content determined by spectrophotography and fluorescent analysis were consistent with the transcripts of two GSH synthetic genes, GSH1 and GSH2 encoding gamma-glutamyl cysteine synthetase and glutathione synthetase, respectively.	beta-cdh	5-13	glutathione synthetase, chloroplastic	Solanum lycopersicum	195-199
27543888-7	2016	Upon beta-CDH treatment, the changes of endogenous GSH content determined by spectrophotography and fluorescent analysis were consistent with the transcripts of two GSH synthetic genes, GSH1 and GSH2 encoding gamma-glutamyl cysteine synthetase and glutathione synthetase, respectively.	beta-cdh	5-13	glutamate--cysteine ligase, chloroplastic	Solanum lycopersicum	209-243
27543888-7	2016	Upon beta-CDH treatment, the changes of endogenous GSH content determined by spectrophotography and fluorescent analysis were consistent with the transcripts of two GSH synthetic genes, GSH1 and GSH2 encoding gamma-glutamyl cysteine synthetase and glutathione synthetase, respectively.	beta-cdh	5-13	glutathione synthetase, chloroplastic	Solanum lycopersicum	248-270
27543888-9	2016	Further molecular evidence revealed that both beta-CDH and GSH modulated gene expression of cell cycle regulatory genes (CYCA2;1, CYCA3;1, CYCD3;1, and CDKA1) and auxin signaling genes (ARF7 and RSI-1), six marker genes responsible for LR formation.	beta-cdh	46-54	cyclin A3	Solanum lycopersicum	130-135
27543888-9	2016	Further molecular evidence revealed that both beta-CDH and GSH modulated gene expression of cell cycle regulatory genes (CYCA2;1, CYCA3;1, CYCD3;1, and CDKA1) and auxin signaling genes (ARF7 and RSI-1), six marker genes responsible for LR formation.	beta-cdh	46-54	cyclin D3.1	Solanum lycopersicum	139-144
25433859-2	2015	beta-Cyclodextrin-hemin complex (beta-CDH), a complex by combining beta-cyclodextrin (beta-CD) with hemin, a heme oxygenase 1 (HO1) inducer, was a trigger of cucumber adventitious root formation by enhancing HO1 gene expression.	beta-cdh	33-41	heme oxygenase 1	Solanum lycopersicum	109-125
25433859-2	2015	beta-Cyclodextrin-hemin complex (beta-CDH), a complex by combining beta-cyclodextrin (beta-CD) with hemin, a heme oxygenase 1 (HO1) inducer, was a trigger of cucumber adventitious root formation by enhancing HO1 gene expression.	beta-cdh	33-41	heme oxygenase 1	Solanum lycopersicum	127-130
25433859-2	2015	beta-Cyclodextrin-hemin complex (beta-CDH), a complex by combining beta-cyclodextrin (beta-CD) with hemin, a heme oxygenase 1 (HO1) inducer, was a trigger of cucumber adventitious root formation by enhancing HO1 gene expression.	beta-cdh	33-41	heme oxygenase 1, chloroplastic	Cucumis sativus	208-211
25433859-6	2015	Our analysis suggested that beta-CDH induced an increase in endogenous NO production, followed by up-regulation of tomato HO1 gene and LR formation, all of which were mimicked by hemin and two NO-releasing compounds (SNP and GSNO).	beta-cdh	28-36	heme oxygenase 1	Solanum lycopersicum	122-125
25433859-7	2015	The induction of HO1 gene expression and LR formation triggered by beta-CDH or hemin were significantly blocked by an inhibitor of HO1.	beta-cdh	67-75	heme oxygenase 1	Solanum lycopersicum	17-20
25433859-7	2015	The induction of HO1 gene expression and LR formation triggered by beta-CDH or hemin were significantly blocked by an inhibitor of HO1.	beta-cdh	67-75	heme oxygenase 1	Solanum lycopersicum	131-134
25433859-8	2015	Further results revealed that both beta-CDH- and SNP-stimulated HO1 gene expression and thereafter LR formation were sensitive to the removal of NO with a potent NO scavenger, and the responses of SNP were significantly blocked by an inhibitor of HO1.	beta-cdh	35-43	heme oxygenase 1	Solanum lycopersicum	64-67
25433859-8	2015	Further results revealed that both beta-CDH- and SNP-stimulated HO1 gene expression and thereafter LR formation were sensitive to the removal of NO with a potent NO scavenger, and the responses of SNP were significantly blocked by an inhibitor of HO1.	beta-cdh	35-43	heme oxygenase 1	Solanum lycopersicum	247-250
25433859-9	2015	Molecular evidence illustrated that representative cell cycle regulatory genes, including SlCDKA1, SlCYCA3;1, SlCYCA2;1, and SlCYCD3;1, were significantly up-regulated by beta-CDH and SNP, but obviously blocked when seedlings were co-treated with the scavenger of NO or the inhibitor of HO1.	beta-cdh	171-179	heme oxygenase 1	Solanum lycopersicum	287-290
25433859-10	2015	In summary, our physiological and molecular evidence demonstrated that both NO and HO1 were involved in the beta-CDH-induced LR formation with, at least partially, HO1 acting downstream of NO signaling.	beta-cdh	108-116	heme oxygenase 1	Solanum lycopersicum	83-86
25433859-10	2015	In summary, our physiological and molecular evidence demonstrated that both NO and HO1 were involved in the beta-CDH-induced LR formation with, at least partially, HO1 acting downstream of NO signaling.	beta-cdh	108-116	heme oxygenase 1	Solanum lycopersicum	164-167