PMID-sentid	Pub_year	Sent_text	compound_name	comp_offset	prot_official_name	organism	prot_offset
29196849-2	2018	MicroRNA, miR163, is unique to the Arabidopsis genus and is processed into a 24-nucleotide (nt) mature small regulatory RNA (sRNA) from a single precursor transcript transcribed from a single locus, the MIR163 gene.	24-nucleotide	77-90	MIR163	Arabidopsis thaliana	10-16
29196849-2	2018	MicroRNA, miR163, is unique to the Arabidopsis genus and is processed into a 24-nucleotide (nt) mature small regulatory RNA (sRNA) from a single precursor transcript transcribed from a single locus, the MIR163 gene.	24-nucleotide	77-90	MIR163	Arabidopsis thaliana	203-209
27531226-4	2016	Genetic and biochemical evidence indicate that at many repeat loci, DDB2 influences de novo DNA methylation by interacting with ARGONAUTE4 and by controlling the local abundance of 24-nucleotide short interfering RNAs (siRNAs).	24-nucleotide	181-194	damaged DNA binding 2	Arabidopsis thaliana	68-72
29379150-2	2018	In plants, RNA-directed DNA methylation (RdDM) requires 24-nucleotide small interfering RNAs (siRNAs) that bind to ARGONAUTE 4 (AGO4) and target genomic regions for silencing.	24-nucleotide	56-69	Argonaute family protein	Arabidopsis thaliana	115-126
28232389-5	2017	In vitro experiments using tobacco BY-2 cell lysate (BYL) revealed that the complex of DRB7.1/DRB4 impairs cleavage of diverse dsRNA substrates into 24-nucleotide (nt) small interfering (si) RNAs, an action performed by DCL3.	24-nucleotide	149-162	double-stranded-RNA-binding protein 4	Arabidopsis thaliana	94-98
26992170-0	2016	Brief Report: Association of Tumor Necrosis Factor Receptor-Associated Periodic Syndrome With Gonosomal Mosaicism of a Novel 24-Nucleotide TNFRSF1A Deletion.	24-nucleotide	125-138	tumor necrosis factor	Homo sapiens	29-50
26992170-0	2016	Brief Report: Association of Tumor Necrosis Factor Receptor-Associated Periodic Syndrome With Gonosomal Mosaicism of a Novel 24-Nucleotide TNFRSF1A Deletion.	24-nucleotide	125-138	TNF receptor superfamily member 1A	Homo sapiens	139-147
21457371-3	2011	Among them, AGO1 mainly acts in microRNA (miRNA) and small-interfering RNA (siRNA) pathways for post-transcriptional gene silencing (PTGS), whereas AGO4 regulates transcriptional gene silencing (TGS) via endogenous 24-nucleotide (nt) smRNAs.	24-nucleotide	215-228	Stabilizer of iron transporter SufD / Polynucleotidyl transferase	Arabidopsis thaliana	12-16
26764378-0	2016	Arabidopsis RNASE THREE LIKE2 Modulates the Expression of Protein-Coding Genes via 24-Nucleotide Small Interfering RNA-Directed DNA Methylation.	24-nucleotide	83-96	RNAse THREE-like protein 2	Arabidopsis thaliana	12-29
26764378-9	2016	We show that changes in 24-nucleotide siRNA levels also affect DNA methylation levels at such loci and inversely correlate with mRNA steady state levels, thus implicating RTL2 in the regulation of protein-coding gene expression.	24-nucleotide	24-37	RNAse THREE-like protein 2	Arabidopsis thaliana	171-175
24656338-1	2014	DICER-like 3 (DCL3) is a major player in heterochromatic 24-nucleotide (nt) small RNA (sRNA) and long microRNA (lmiRNA) biogenesis, and higher plant DCL3 mutants have been characterized from Arabidopsis thaliana and rice.	24-nucleotide	57-70	dicer-like 3	Arabidopsis thaliana	0-12
24656338-1	2014	DICER-like 3 (DCL3) is a major player in heterochromatic 24-nucleotide (nt) small RNA (sRNA) and long microRNA (lmiRNA) biogenesis, and higher plant DCL3 mutants have been characterized from Arabidopsis thaliana and rice.	24-nucleotide	57-70	dicer-like 3	Arabidopsis thaliana	14-18
21647381-6	2011	We find that these RNA probes are substrates for relevant cellular degradative processes, including the RNase H1 mediated degradation of an DNA/RNA hybrid and Dicer-mediated cleavage of a 24-nucleotide (per strand) double-stranded RNA.	24-nucleotide	188-201	ribonuclease H1	Homo sapiens	104-112
20410883-2	2010	In plants, 24-nucleotide small interfering RNAs (siRNAs) bound to the effector protein, Argonaute 4 (AGO4), can direct de novo DNA methylation by the methyltransferase DRM2 (refs 2, 4-6).	24-nucleotide	11-24	Argonaute family protein	Arabidopsis thaliana	88-99
20410883-2	2010	In plants, 24-nucleotide small interfering RNAs (siRNAs) bound to the effector protein, Argonaute 4 (AGO4), can direct de novo DNA methylation by the methyltransferase DRM2 (refs 2, 4-6).	24-nucleotide	11-24	domains rearranged methyltransferase 2	Arabidopsis thaliana	168-172
18266474-1	2008	DNA methylation directed by 24-nucleotide small RNAs involves the small RNA-binding protein ARGONAUTE4 (AGO4), and it was previously shown that AGO4 localizes to nucleolus-adjacent Cajal bodies, sites of snRNP complex maturation.	24-nucleotide	28-41	Argonaute family protein	Arabidopsis thaliana	92-102
20208518-7	2010	AGO9 preferentially interacts with 24-nucleotide sRNAs derived from transposable elements (TEs), and its activity is necessary to silence TEs in female gametes and their accessory cells.	24-nucleotide	35-48	Argonaute family protein	Arabidopsis thaliana	0-4
18815367-6	2008	Similar to rdr2 in Arabidopsis, in mop1-1, the 24-nucleotide (nt) endogenous heterochromatic short-interfering siRNAs were dramatically reduced, resulting in an enrichment of miRNAs and transacting siRNAs.	24-nucleotide	47-60	RNA-dependent RNA polymerase 2	Arabidopsis thaliana	11-15
18815367-6	2008	Similar to rdr2 in Arabidopsis, in mop1-1, the 24-nucleotide (nt) endogenous heterochromatic short-interfering siRNAs were dramatically reduced, resulting in an enrichment of miRNAs and transacting siRNAs.	24-nucleotide	47-60	RNA-dependent DNA polymerase	Zea mays	35-39
9154943-3	1997	We have established that a 24-nucleotide sequence (PS5.M), from within PS5.ST1, is both the minimal and most optimal catalytic unit.	24-nucleotide	27-40	taste 2 receptor member 67 pseudogene	Homo sapiens	51-54
9154943-3	1997	We have established that a 24-nucleotide sequence (PS5.M), from within PS5.ST1, is both the minimal and most optimal catalytic unit.	24-nucleotide	27-40	taste 2 receptor member 67 pseudogene	Homo sapiens	71-74
17526749-3	2007	We also identified an SNF2 domain-containing protein (CLASSY1) that acts together with RDR2 and NRPD1a in the spread of transgene silencing and in the production of endogenous 24-nucleotide short interfering RNAs (siRNAs).	24-nucleotide	176-189	switch 2	Arabidopsis thaliana	22-26
17526749-3	2007	We also identified an SNF2 domain-containing protein (CLASSY1) that acts together with RDR2 and NRPD1a in the spread of transgene silencing and in the production of endogenous 24-nucleotide short interfering RNAs (siRNAs).	24-nucleotide	176-189	chromatin remodeling 38	Arabidopsis thaliana	54-61
17526749-3	2007	We also identified an SNF2 domain-containing protein (CLASSY1) that acts together with RDR2 and NRPD1a in the spread of transgene silencing and in the production of endogenous 24-nucleotide short interfering RNAs (siRNAs).	24-nucleotide	176-189	RNA-dependent RNA polymerase 2	Arabidopsis thaliana	87-91
17526749-3	2007	We also identified an SNF2 domain-containing protein (CLASSY1) that acts together with RDR2 and NRPD1a in the spread of transgene silencing and in the production of endogenous 24-nucleotide short interfering RNAs (siRNAs).	24-nucleotide	176-189	nuclear RNA polymerase D1A	Arabidopsis thaliana	96-102
17526749-5	2007	DCL3 and ARGONAUTE4 act in a downstream part of the pathway, leading to endogenous 24-nucleotide siRNA production, but are not required for intercellular signaling.	24-nucleotide	83-96	dicer-like 3	Arabidopsis thaliana	0-4
17526749-5	2007	DCL3 and ARGONAUTE4 act in a downstream part of the pathway, leading to endogenous 24-nucleotide siRNA production, but are not required for intercellular signaling.	24-nucleotide	83-96	Argonaute family protein	Arabidopsis thaliana	9-19
16741558-6	2006	We provide evidence that these signals include RNA silencing though the 24-nucleotide short interfering RNA (siRNA) pathway as well as histone H3K9 methylation, both of which converge on the putative chromatin-remodeling protein DRD1.	24-nucleotide	72-85	SNF2 domain-containing protein / helicase domain-containing protein	Arabidopsis thaliana	229-233
16556260-3	2006	Using degenerated primers delineated from other species and rapid amplification of cDNA ends reverse transcription-polymerase chain reaction (RACE RT-PCR), the cDNA of equine (eq.) GM-CSF was cloned and found to have a point deletion at the 3"-end of eq.GM-CSF, resulting in a 24-nucleotide extended open reading frame not described in any species thus far.	24-nucleotide	277-290	colony stimulating factor 2	Equus caballus	181-187
8628286-4	1996	The second form is identical to p85 and p85/AS53 except for a 24-nucleotide insert between the SH2 domains that results in a replacement of aspartic acid 605 with nine amino acids, adding two potential serine phosphorylation sites in the vicinity of the known serine autophosphorylation site (Ser-608).	24-nucleotide	62-75	phosphoinositide-3-kinase regulatory subunit 1	Homo sapiens	32-35
8628286-4	1996	The second form is identical to p85 and p85/AS53 except for a 24-nucleotide insert between the SH2 domains that results in a replacement of aspartic acid 605 with nine amino acids, adding two potential serine phosphorylation sites in the vicinity of the known serine autophosphorylation site (Ser-608).	24-nucleotide	62-75	phosphoinositide-3-kinase regulatory subunit 1	Homo sapiens	40-43