PMID-sentid Pub_year Sent_text comp_official_name comp_offsetprotein_name organism prot_offset 29168280-5 2018 The N-O bond in the products not only acts as a traceless protecting group for beta-amino acids but also undergoes amide formation with alpha-ketoacids derived from Fmoc-protected alpha-amino acids, thus providing expeditious access to alpha-beta2,2 -dipeptides ready for Fmoc-SPPS. Amides 115-120 potassium calcium-activated channel subfamily M regulatory beta subunit 2 Homo sapiens 242-249 31006946-2 2019 Glutamic acid sequences often exhibit unusual organization into beta2 -type sheets, where bifurcated H bonds formed between glutamic acid side chains and NH in amide bonds on adjacent beta-strands play a paramount role for stabilizing the molecular assembly. Amides 160-165 potassium calcium-activated channel subfamily M regulatory beta subunit 2 Homo sapiens 64-69 26590100-3 2016 From library synthesis and further optimization efforts, several structurally diverse reverse amides such as 24c and 24i were found to have excellent human beta3-adrenergic potency and good selectivity over the beta1 and beta2 receptors. Amides 94-100 potassium calcium-activated channel subfamily M regulatory beta subunit 2 Homo sapiens 221-226 27099990-2 2016 Poly(glutamic acid) at low pH self-assembles after incubation at higher temperature into fibrils composed of antiparallel sheets that are stacked in a beta2-type structure whose amide carbonyls have bifurcated H-bonds involving the side chains from the next sheet. Amides 178-183 potassium calcium-activated channel subfamily M regulatory beta subunit 2 Homo sapiens 151-156 26362583-1 2015 Poly-L-glutamic acid (PLGA) forms amyloid-like beta2-fibrils with the main spectral component of vibrational amide I" band unusually shifted below 1600 cm(-1). Amides 109-114 potassium calcium-activated channel subfamily M regulatory beta subunit 2 Homo sapiens 47-52 25144464-2 2014 Aggregation of PLGA chains and formation of amyloid-like fibrils was shown to continue on higher levels of superstructural self-assembly coinciding with the appearance of so-called beta2-sheet conformation manifesting in dramatic redshift of infrared amide I" band below 1600 cm(-1). Amides 251-256 potassium calcium-activated channel subfamily M regulatory beta subunit 2 Homo sapiens 181-186 24559065-0 2014 Density functional theory based study on cis-trans isomerism of the amide bond in homodimers of beta(2,3)- and beta(3)-substituted homoproline. Amides 68-73 potassium calcium-activated channel subfamily M regulatory beta subunit 2 Homo sapiens 96-104 20509699-3 2010 The beta(2) fibrils are formed upon heating of aqueous solutions of alpha-helical poly(l-glutamic) acid, which leads to a significant increase of pD (pH) of unbuffered samples and a concomitant precipitation of fibrils with unusual infrared traits: amide I" band being dramatically red-shifted to 1596 cm(-1), and the -COOD stretching band split into two peaks around 1730 and 1719 cm(-1). Amides 249-254 potassium calcium-activated channel subfamily M regulatory beta subunit 2 Homo sapiens 4-10 23161625-3 2012 Uniquely, they catalyze the hydrolysis of beta(3) - and/or beta(2) -amino acid residues from amides and peptides that are otherwise considered proteolytically stable. Amides 93-99 potassium calcium-activated channel subfamily M regulatory beta subunit 2 Homo sapiens 59-66 20112354-8 2010 The residues with N-terminal methylated amide and a C-terminal ester bond prefer the conformations beta, beta2, and interestingly, the conformation alpha(L). Amides 40-45 potassium calcium-activated channel subfamily M regulatory beta subunit 2 Homo sapiens 105-110