PMID-sentid Pub_year Sent_text comp_official_name comp_offsetprotein_name organism prot_offset 12526667-0 2003 Insights into the acylation mechanism of class A beta-lactamases from molecular dynamics simulations of the TEM-1 enzyme complexed with benzylpenicillin. Penicillin G 136-152 CD248 molecule Homo sapiens 108-113 19791786-3 2009 We have investigated the first step in acylation (the formation of the tetrahedral intermediate) for the reaction of benzylpenicillin in the TEM-1 enzyme using high level combined quantum mechanics/molecular mechanics (QM/MM) methods. Penicillin G 117-133 CD248 molecule Homo sapiens 141-146 19538149-3 2009 Thus, penicillin G was undermined by swift accumulation of staphylococcal penicillinase, ampicillin by TEM-1 enzyme and modern oxymino cephalosporins by "extended-spectrum" beta-lactamases. Penicillin G 6-18 CD248 molecule Homo sapiens 103-108 2834979-4 1988 Using TEM-1 as the model beta-lactamase, a Km of 46 microM was observed with benzylpenicillin serving as the substrate. Penicillin G 77-93 CD248 molecule Homo sapiens 6-11 8756327-2 1996 The boronate inhibitor was designed based on the crystallographic coordinates of the acyl-enzyme intermediate of TEM-1 bound to the substrate penicillin G. Penicillin G 142-154 CD248 molecule Homo sapiens 113-118