PMID-sentid Pub_year Sent_text comp_official_name comp_offsetprotein_name organism prot_offset 21523511-1 2011 PURPOSE: Several poorly water-soluble drugs have previously been shown to bind to intestinal (I-FABP) and liver fatty acid binding protein (L-FABP) in vitro. Water 24-29 fatty acid binding protein 2 Rattus norvegicus 94-100 17901544-5 2007 FABP increases this rate by increasing the solubility of fatty acids in water. Water 72-77 fatty acid binding protein 2 Rattus norvegicus 0-4 11170215-1 2001 Multiple molecular dynamics (MD) simulations of fully solvated rat intestinal fatty acid binding protein (I-FABP) were conducted to investigate the dynamics of internal water molecules. Water 169-174 fatty acid binding protein 2 Rattus norvegicus 106-112 11812142-11 2002 Solvent inside apo-FABP, for example, shows characteristics of a water droplet, while solvent in holo-FABP benefits from interactions with the ligand headgroup and slightly stronger interactions with protein residues. Water 65-70 fatty acid binding protein 2 Rattus norvegicus 19-23 11170215-2 2001 Although the long time average of the number of internal water molecules in I-FABP is 22 as shown by the X-ray crystal structure, MD simulations predict large variations in the instantaneous number of internal water molecules on the nanosecond time scale. Water 57-62 fatty acid binding protein 2 Rattus norvegicus 76-82 11170215-5 2001 Exchange of internal water in I-FABP appears to occur almost exclusively through the interface of beta-strands EF with the rest of the protein, which has significant implications for the pathways of the fatty acid entry and exit from the binding cavity. Water 21-26 fatty acid binding protein 2 Rattus norvegicus 30-36 10452609-8 1999 In holo I-FABP the fatty acid chain interactions with the hydrophilic side chains are mediated by water molecules. Water 98-103 fatty acid binding protein 2 Rattus norvegicus 8-14 10752611-1 2000 A single water molecule (w135), buried within the structure of rat intestinal fatty acid binding protein (I-FABP), is investigated by NMR, molecular dynamics simulations, and analysis of known crystal structures. Water 9-14 fatty acid binding protein 2 Rattus norvegicus 67-104 10752611-1 2000 A single water molecule (w135), buried within the structure of rat intestinal fatty acid binding protein (I-FABP), is investigated by NMR, molecular dynamics simulations, and analysis of known crystal structures. Water 9-14 fatty acid binding protein 2 Rattus norvegicus 106-112 10752611-8 2000 Computer simulations suggest that escape of w135 from the I-FABP matrix is primarily determined by conformational fluctuations of the protein backbone and interactions with external water molecules. Water 182-187 fatty acid binding protein 2 Rattus norvegicus 58-64 10452609-11 1999 The MD simulation predicts significant structural perturbations of the cavity on the subnanosecond time scale, which are capable of facilitating exchange of I-FABP internal water. Water 173-178 fatty acid binding protein 2 Rattus norvegicus 157-163 1429693-8 1992 The variation of these Kd values with FA molecular species is highly correlated with the solubility of the FA in water, suggesting that all these FA bind with a similar conformation in the I-FABP binding site. Water 113-118 fatty acid binding protein 2 Rattus norvegicus 189-195 26012957-3 2015 We use magnetic relaxation dispersion (MRD) to directly monitor internal-water dynamics in apo and palmitate-bound rat intestinal fatty acid-binding protein (rIFABP). Water 73-78 fatty acid binding protein 2 Rattus norvegicus 158-164 31198147-14 2019 Serum I-FABP level in the EHS+water and EHS+ORS III groups were notably lower than that in the EHS group [mug/L: 24.19 (20.00, 28.36), 0.31 (0.31, 5.58) vs. 36.90 (29.10, 45.00), both P < 0.01], additionally, I-FABP level was much lower in the EHS+ORS III group (P < 0.01). Water 30-35 fatty acid binding protein 2 Rattus norvegicus 6-12 26012957-4 2015 Specifically, we record the water (2)H and (17)O MRD profiles of the apo and holo forms of rIFABP in solution or immobilized by covalent cross-links. Water 28-33 fatty acid binding protein 2 Rattus norvegicus 91-97