PMID-sentid	Pub_year	Sent_text		comp_official_name	comp_offsetprotein_name	organism	prot_offset
8636038-2	1996	Alternatively, in cells growing on toluene or its aromatic alcohols, overexpression of xylS mediated by XylR activated by these compounds leads to overproduction of the XylS regulator, which even in the absence of benzoate effectors stimulates transcription from the meta cleavage pathway operon promoter.	Toluene	35-42	transcriptional activator of xyl-meta pathway operon	Pseudomonas putida	87-91	
8636038-2	1996	Alternatively, in cells growing on toluene or its aromatic alcohols, overexpression of xylS mediated by XylR activated by these compounds leads to overproduction of the XylS regulator, which even in the absence of benzoate effectors stimulates transcription from the meta cleavage pathway operon promoter.	Toluene	35-42	transcriptional activator of xyl-meta pathway operon	Pseudomonas putida	169-173	
8636038-7	1996	In cells growing on toluene or benzyl alcohols, the XylS regulator is overproduced as a consequence of increased expression of the gene through the effect of the two promoters working in tandem: the newly found sigma 70-dependent promoter, whose expression is XylR and toluene independent, and the sigma 54-dependent promoter, whose expression is dependent on XylR activated by its effectors.	Toluene	20-27	transcriptional activator of xyl-meta pathway operon	Pseudomonas putida	52-56	
8636038-7	1996	In cells growing on toluene or benzyl alcohols, the XylS regulator is overproduced as a consequence of increased expression of the gene through the effect of the two promoters working in tandem: the newly found sigma 70-dependent promoter, whose expression is XylR and toluene independent, and the sigma 54-dependent promoter, whose expression is dependent on XylR activated by its effectors.	Toluene	269-276	transcriptional activator of xyl-meta pathway operon	Pseudomonas putida	52-56	
8071244-1	1994	The Pm promoter of the meta cleavage operon in the TOL (toluene degradation) plasmid pWW0 of Pseudomonas putida becomes activated by the plasmid-encoded XylS regulator in the presence of benzoate and certain substituted analogs such as 3-methylbenzoate.	Toluene	56-63	transcriptional activator of xyl-meta pathway operon	Pseudomonas putida	153-157	
3448461-5	1987	Expression of the meta pathway is also induced by toluene/xylene-activated XylR protein via a cascade regulatory system in which this protein in combination with NtrA protein stimulates transcription from the xylS gene promoter.	Toluene	50-57	transcriptional activator of xyl-meta pathway operon	Pseudomonas putida	209-213	
3301806-0	1987	Activation of the xylDLEGF promoter of the TOL toluene-xylene degradation pathway by overproduction of the xylS regulatory gene product.	Toluene	47-54	transcriptional activator of xyl-meta pathway operon	Pseudomonas putida	107-111	
9603877-1	1998	The xylR and xylS genes are divergent and control transcription of the TOL plasmid catabolic pathways for toluene metabolism.	Toluene	106-113	transcriptional activator of xyl-meta pathway operon	Pseudomonas putida	13-17	
9343354-1	1997	The xyl genes of Pseudomonas putida TOL plasmid that specify catabolism of toluene and xylenes are organized in four transcriptional units: the upper-operon xylUWCAMBN for conversion of toluene/xylenes into benzoate/alkylbenzoates; the meta-operon xylXYZLTEGFJQKIH, which encodes the enzymes for further conversion of these compounds into Krebs cycle intermediates; and xylS and xylR, which are involved in transcriptional control.	Toluene	186-193	transcriptional activator of xyl-meta pathway operon	Pseudomonas putida	370-374