PMID-sentid Pub_year Sent_text comp_official_name comp_offsetprotein_name organism prot_offset 23934150-2 2013 The crystal structure of the N-terminally acetylated BAH domain of Saccharomyces cerevisiae Sir3 bound to the nucleosome core particle reveals that the N-terminal acetylation stabilizes the interaction of Sir3 with the nucleosome. bis(5-amidino-2-benzimidazolyl)methane ketone hydrate 53-56 chromatin-silencing protein SIR3 Saccharomyces cerevisiae S288C 92-96 23934152-0 2013 Nalpha-acetylated Sir3 stabilizes the conformation of a nucleosome-binding loop in the BAH domain. bis(5-amidino-2-benzimidazolyl)methane ketone hydrate 87-90 chromatin-silencing protein SIR3 Saccharomyces cerevisiae S288C 18-22 23934150-2 2013 The crystal structure of the N-terminally acetylated BAH domain of Saccharomyces cerevisiae Sir3 bound to the nucleosome core particle reveals that the N-terminal acetylation stabilizes the interaction of Sir3 with the nucleosome. bis(5-amidino-2-benzimidazolyl)methane ketone hydrate 53-56 chromatin-silencing protein SIR3 Saccharomyces cerevisiae S288C 205-209 18391024-9 2008 Our results suggest that the BAH domain of Sir3 binds to histone H3K79 and that acetylation of the BAH domain is required for the binding specificity of Sir3 for nucleosomes unmethylated at H3K79. bis(5-amidino-2-benzimidazolyl)methane ketone hydrate 29-32 chromatin-silencing protein SIR3 Saccharomyces cerevisiae S288C 43-47 19171939-10 2009 We propose that the functional specialization of Sir3, itself a paralog of Orc1, as a silencing protein was facilitated by the tandem duplication of the OIR domain in the Sir1 family, allowing distinct Sir1-Sir3 and Sir1-Orc1 interactions through OIR-BAH domain interactions. bis(5-amidino-2-benzimidazolyl)methane ketone hydrate 251-254 chromatin-silencing protein SIR3 Saccharomyces cerevisiae S288C 49-53 18794362-5 2008 The BAH point mutants, but not the L738P mutant, disrupted the interaction between Sir3 and nucleosomes. bis(5-amidino-2-benzimidazolyl)methane ketone hydrate 4-7 chromatin-silencing protein SIR3 Saccharomyces cerevisiae S288C 83-87 18391024-9 2008 Our results suggest that the BAH domain of Sir3 binds to histone H3K79 and that acetylation of the BAH domain is required for the binding specificity of Sir3 for nucleosomes unmethylated at H3K79. bis(5-amidino-2-benzimidazolyl)methane ketone hydrate 99-102 chromatin-silencing protein SIR3 Saccharomyces cerevisiae S288C 153-157 16581798-10 2006 This superhelix may be relevant to the function of the BAH domain of Sir3 in silencing. bis(5-amidino-2-benzimidazolyl)methane ketone hydrate 55-58 chromatin-silencing protein SIR3 Saccharomyces cerevisiae S288C 69-73