PMID-sentid Pub_year Sent_text comp_official_name comp_offsetprotein_name organism prot_offset 34131072-4 2021 We determined the X-ray structures of the SARS-CoV-2 2"-O-methyltransferase (the nsp16-nsp10 heterodimer) in complex with its reaction substrates, products, and divalent metal cations. Metals 170-175 ORF1a polyprotein;ORF1ab polyprotein Severe acute respiratory syndrome coronavirus 2 87-92 34083449-2 2021 We found that the catalytic subunit of the RdRp, nsp12, ligates two iron-sulfur metal cofactors in sites that were modeled as zinc centers in the available cryo-electron microscopy structures of the RdRp complex. Metals 80-85 ORF1a polyprotein;ORF1ab polyprotein Severe acute respiratory syndrome coronavirus 2 43-47 34083449-2 2021 We found that the catalytic subunit of the RdRp, nsp12, ligates two iron-sulfur metal cofactors in sites that were modeled as zinc centers in the available cryo-electron microscopy structures of the RdRp complex. Metals 80-85 ORF1a polyprotein;ORF1ab polyprotein Severe acute respiratory syndrome coronavirus 2 199-203 34393787-9 2021 Many studies have shown that the presence of a metal ion in the structure can significantly affect the affinity of the compound to key structural elements of the SARS CoV-2, such as Mpro protease, RNA-dependent RNA polymerase (RdRp) and spike protein. Metals 47-52 ORF1a polyprotein;ORF1ab polyprotein Severe acute respiratory syndrome coronavirus 2 227-231 33933612-6 2021 SARS-CoV-2 nsp14-nsp10 shows a metal-dependent nuclease activity but has different metal selectivity from RTC. Metals 31-36 ORF1a polyprotein;ORF1ab polyprotein Severe acute respiratory syndrome coronavirus 2 17-22 35185264-4 2022 Recent studies have identified a sulfur (S) metal-binding site in the zinc center structures of the RdRp complex. Metals 44-49 ORF1a polyprotein;ORF1ab polyprotein Severe acute respiratory syndrome coronavirus 2 100-104 33933612-6 2021 SARS-CoV-2 nsp14-nsp10 shows a metal-dependent nuclease activity but has different metal selectivity from RTC. Metals 83-88 ORF1a polyprotein;ORF1ab polyprotein Severe acute respiratory syndrome coronavirus 2 17-22 33287144-1 2020 The RNA-dependent RNA polymerase (RdRp) is an essential enzyme for the viral replication process, catalyzing the viral RNA synthesis using a metal ion-dependent mechanism. Metals 141-146 ORF1a polyprotein;ORF1ab polyprotein Severe acute respiratory syndrome coronavirus 2 34-38