PMID-sentid Pub_year Sent_text comp_official_name comp_offsetprotein_name organism prot_offset 35120937-1 2022 Ammonia dependent NAD+ synthetase from multi drug resistance Staphylococcus aureus catalyzes ATP dependent formation of NAD+ from deamido-NAD+ and ammonia at the synthetase active site. nicotinic acid adenine dinucleotide 130-142 AT695_RS07645 Staphylococcus aureus 18-33 33098904-1 2020 NAD synthetase (NadE) catalyzes the last step in NAD biosynthesis, transforming deamido-NAD+ into NAD+ by a two-step reaction with co-substrates ATP and amide donor ammonia. nicotinic acid adenine dinucleotide 80-92 AT695_RS07645 Staphylococcus aureus 0-14 33098904-1 2020 NAD synthetase (NadE) catalyzes the last step in NAD biosynthesis, transforming deamido-NAD+ into NAD+ by a two-step reaction with co-substrates ATP and amide donor ammonia. nicotinic acid adenine dinucleotide 80-92 AT695_RS07645 Staphylococcus aureus 16-20 33098904-3 2020 We used this structure to perform molecular dynamics simulations of apo-enzyme, enzyme-substrate (NadE with ATP and NaAD) and enzyme-intermediate complexes (NadE with NaAD-AMP) to investigate key binding interactions and explore the conformational transitions and flexibility of the binding pocket. nicotinic acid adenine dinucleotide 116-120 AT695_RS07645 Staphylococcus aureus 98-102