PMID-sentid Pub_year Sent_text comp_official_name comp_offsetprotein_name organism prot_offset 19153082-6 2009 The x-ray structures revealed surprising conformational changes of the binding cleft of HdmX, including an "open conformation" of Tyr(99) and unexpected "cross-talk" between the Trp and Leu pockets. Leucine 186-189 MDM2 proto-oncogene Homo sapiens 88-92 7926727-5 1994 Rather, the hydrophobic amino acid residues Leu-22 and Trp-23 of human p53 are both required for trans-activation activity, binding to the adenovirus E1B 55-kD protein and the human mdm-2-p53 protein in vitro. Leucine 44-47 MDM2 proto-oncogene Homo sapiens 182-187 7926727-6 1994 In addition, hydrophobic residues Leu-14 and Phe-19 are crucial for the interactions between p53 and human mdm-2 (hdm-2). Leucine 34-37 MDM2 proto-oncogene Homo sapiens 107-112 7926727-6 1994 In addition, hydrophobic residues Leu-14 and Phe-19 are crucial for the interactions between p53 and human mdm-2 (hdm-2). Leucine 34-37 MDM2 proto-oncogene Homo sapiens 114-119 34958576-4 2022 Hoping to create a novel class of membrane-permeable PPI inhibitors, the phenylalanine, tryptophan, and leucine residues that play a critical role in inhibiting the p53-HDM2 interaction were grafted into the framework of CADY2 a cell-penetrating peptide (CPP) having a helical propensity. Leucine 104-111 MDM2 proto-oncogene Homo sapiens 169-173 31226791-10 2019 The resultant analog sequence Ac-Leu-Thr-Phe-Aib-Glu-Tyr-Trp-Gln-Leu-Cba-Aib-Ser-Ala-Ala-NH2 exhibited high-affinity target binding (Mdm2 Kd = 43 nM) and significant alpha-helicity in circular dichroism studies. Leucine 33-36 MDM2 proto-oncogene Homo sapiens 133-137 34977581-3 2021 X-Ray crystallography reveals a novel binding mode utilizing a unique pharmacophore to occupy the Phe/Trp/Leu pockets on MDM2. Leucine 106-109 MDM2 proto-oncogene Homo sapiens 121-125 18707164-2 2008 The result of the calculation, based on structures from nanosecond molecular dynamics simulation, revealed that (19)Phe, (22)Leu, and (23)Trp of p53 have the strongest binding interaction with MDM2 followed by (26)Leu and (27)Pro. Leucine 125-128 MDM2 proto-oncogene Homo sapiens 193-197 18707164-2 2008 The result of the calculation, based on structures from nanosecond molecular dynamics simulation, revealed that (19)Phe, (22)Leu, and (23)Trp of p53 have the strongest binding interaction with MDM2 followed by (26)Leu and (27)Pro. Leucine 214-217 MDM2 proto-oncogene Homo sapiens 193-197 18707164-3 2008 The specific residues of MDM2 that have dominant binding interactions with p53 are specifically identified to be (51)Lys, (54)Leu, (62)Met, (67)Tyr, (72)Gln, (94)Lys, (96)His, and (100)Tyr. Leucine 126-129 MDM2 proto-oncogene Homo sapiens 25-29 11925449-5 2002 Mutation of conserved amino acids in the linker at Ser(261) and Leu(264), which bridges the S9-S10 beta-sheets, stimulated p53 activity from reporter templates and increased MDM2-dependent ubiquitination of p53. Leucine 64-67 MDM2 proto-oncogene Homo sapiens 174-178 17002294-5 2006 Specificity for binding MDM2 via FXX phi phi motifs derives almost entirely from Trp23 of p53, with a 3.0 kcal mol(-1) loss of binding energy when Trp23 is changed to p65-derived Leu. Leucine 179-182 MDM2 proto-oncogene Homo sapiens 24-28 15600307-2 2004 A retroinverso isomer of the natural N-terminal helical peptide was found to interact with MDM2 using the same hydrophobic residues, Phe, Trp, and Leu. Leucine 147-150 MDM2 proto-oncogene Homo sapiens 91-95