PMID-sentid Pub_year Sent_text comp_official_name comp_offsetprotein_name organism prot_offset 15988024-8 2005 Despite their separate functions in silencing and SAGA-mediated transcription, respectively, deletion of both UBP10 and UBP8 results in a synergistic increase in the steady-state levels of H2B ubiquitination and in the number of genes with altered expression, indicating that Ubp10p and Ubp8p likely overlap in some of their target chromatin regions. ubp8 120-124 H2B clustered histone 21 Homo sapiens 189-192 26912860-3 2016 The crystal structure of the Ubp8/Sgf11/Sus1/Sgf73 DUB module bound to a ubiquitinated nucleosome reveals that the DUB module primarily contacts H2A/H2B, with an arginine cluster on the Sgf11 zinc finger domain docking on the conserved H2A/H2B acidic patch. ubp8 29-33 H2B clustered histone 21 Homo sapiens 149-152 26912860-3 2016 The crystal structure of the Ubp8/Sgf11/Sus1/Sgf73 DUB module bound to a ubiquitinated nucleosome reveals that the DUB module primarily contacts H2A/H2B, with an arginine cluster on the Sgf11 zinc finger domain docking on the conserved H2A/H2B acidic patch. ubp8 29-33 H2B clustered histone 21 Homo sapiens 240-243 26912860-4 2016 The Ubp8 catalytic domain mediates additional contacts with H2B, as well as with the conjugated ubiquitin. ubp8 4-8 H2B clustered histone 21 Homo sapiens 60-63 17643376-0 2007 H2B ubiquitylation acts as a barrier to Ctk1 nucleosomal recruitment prior to removal by Ubp8 within a SAGA-related complex. ubp8 89-93 H2B clustered histone 21 Homo sapiens 0-3 17643376-2 2007 We previously studied histone H2B ubiquitylation on lysine 123 and subsequent deubiquitylation by SAGA-associated Ubp8. ubp8 114-118 H2B clustered histone 21 Homo sapiens 30-33 14563679-5 2003 We show that Ubp8, a component of the SAGA acetylation complex, is required for SAGA-mediated deubiquitylation of histone H2B in vitro. ubp8 13-17 H2B clustered histone 21 Homo sapiens 122-125 14563679-6 2003 Loss of Ubp8 in vivo increased both gene-associated and overall cellular levels of ubiquitylated H2B. ubp8 8-12 H2B clustered histone 21 Homo sapiens 97-100 14563679-8 2003 In addition, disruption of either ubiquitylation or Ubp8-mediated deubiquitylation of H2B resulted in altered levels of gene-associated H3 Lys 4 methylation and Lys 36 methylation, which have both been linked to transcription. ubp8 52-56 H2B clustered histone 21 Homo sapiens 86-89 15657442-3 2005 The recent finding that the removal of the ubiquitin group from H2B is performed by a component of SAGA, Ubp8, is intriguing as it assigns two posttranslation modification processes to one complex. ubp8 105-109 H2B clustered histone 21 Homo sapiens 64-67