PMID-sentid Pub_year Sent_text comp_official_name comp_offsetprotein_name organism prot_offset 23519409-7 2013 During this process, VPS9a directly interacts with the beta-phosphate of GDP and the P-loop lysine of ARA7 via a catalytically important aspartate finger, which promotes the release of GDP from ARA7. Lysine 92-98 Ras-related small GTP-binding family protein Arabidopsis thaliana 102-106 23519409-7 2013 During this process, VPS9a directly interacts with the beta-phosphate of GDP and the P-loop lysine of ARA7 via a catalytically important aspartate finger, which promotes the release of GDP from ARA7. Lysine 92-98 Ras-related small GTP-binding family protein Arabidopsis thaliana 194-198 20833725-5 2010 The aspartate finger of VPS9a recognizes GDP beta-phosphate directly and pulls the P-loop lysine of ARA7 away from GDP beta-phosphate toward switch II to further destabilize GDP for its release during the transition from the GDP-bound to nucleotide-free intermediates in the nucleotide exchange reaction. Lysine 90-96 Ras-related small GTP-binding family protein Arabidopsis thaliana 100-104