PMID-sentid Pub_year Sent_text comp_official_name comp_offsetprotein_name organism prot_offset 15048829-4 2004 In addition to improving the energy balance between folded and unfolded conformers, the algorithm (available in the AMBER-7 and NAB molecular modeling packages) is shown to perform well in more than 50 ns of native-state molecular dynamics (MD) simulations of thioredoxin, protein-A, and ubiquitin, as well as in a simulation of Barnase/Barstar complex formation. nab 128-131 thioredoxin Homo sapiens 260-271 32547098-2 2020 However, the role of thioredoxin-1 (Trx-1) in NaB-induced anti-tumor effect has not been completely clarified. nab 46-49 thioredoxin Homo sapiens 21-34 32547098-2 2020 However, the role of thioredoxin-1 (Trx-1) in NaB-induced anti-tumor effect has not been completely clarified. nab 46-49 thioredoxin Homo sapiens 36-41 32547098-9 2020 Results: NaB treatment significantly inhibited cell growth and decreased Trx-1 protein expression in CRC cells but not in normal colon epithelial cells. nab 9-12 thioredoxin Homo sapiens 73-78 32547098-12 2020 Moreover, downregulation of Trx-1 significantly enhanced NaB-induced inhibitory effects on cell growth and migration, whereas overexpression of Trx-1 attenuated NaB-induced inhibitory effects on growth and migration in CRC cells. nab 57-60 thioredoxin Homo sapiens 28-33 32547098-12 2020 Moreover, downregulation of Trx-1 significantly enhanced NaB-induced inhibitory effects on cell growth and migration, whereas overexpression of Trx-1 attenuated NaB-induced inhibitory effects on growth and migration in CRC cells. nab 161-164 thioredoxin Homo sapiens 144-149 32547098-13 2020 Conclusion: These findings indicate that the NaB-mediated anti-tumor effects on CRC cells are related to downregulation of Trx-1. nab 45-48 thioredoxin Homo sapiens 123-128