PMID-sentid	Pub_year	Sent_text	compound_name	comp_offset	prot_official_name	organism	prot_offset
12828652-5	2003	The proliferative response of the cells to GH was determined over a 48-h period using a crystal violet dye-binding assay.	Gentian Violet	88-102	growth hormone 1	Homo sapiens	43-45
15491096-2	2004	METHODS: L929 crystal violet staining assay was used to show the level of TNFalpha released from mouse peritoneal macrophages induced by LPS.	Gentian Violet	14-28	tumor necrosis factor	Mus musculus	74-82
16146004-4	2004	Susceptibility of tooth enamel to dissolution was estimated by the CRT test with the use of discs impregnated with crystal violet (hexamethylene-4 hydrochloride of fuchsin) with the range of colour change from yellow and green to violet and blue at ph 0.1-1.5.	Gentian Violet	115-129	calcitonin receptor	Homo sapiens	67-70
12932673-1	2003	Two bona fide c-Src inhibitors, denominated CGP77675 and CGP76030, reduced in a time- and concentration-dependent manner (i) the proliferation of the PC3 prostate carcinoma cell line, as assessed by the [3H]-thymidine incorporation test, (ii) the capacity of PC3 cells to adhere and spread on Matrigel substrate, as determined by crystal violet staining, (iii) the ability of PC3 cells to migrate through a gelatine boundary and invade a Matrigel substrate.	Gentian Violet	330-344	SRC proto-oncogene, non-receptor tyrosine kinase	Homo sapiens	14-19
12932673-1	2003	Two bona fide c-Src inhibitors, denominated CGP77675 and CGP76030, reduced in a time- and concentration-dependent manner (i) the proliferation of the PC3 prostate carcinoma cell line, as assessed by the [3H]-thymidine incorporation test, (ii) the capacity of PC3 cells to adhere and spread on Matrigel substrate, as determined by crystal violet staining, (iii) the ability of PC3 cells to migrate through a gelatine boundary and invade a Matrigel substrate.	Gentian Violet	330-344	proprotein convertase subtilisin/kexin type 1	Homo sapiens	150-153
11749798-4	2001	hTNFalpha-induced cytotoxicity was determined by crystal violet colorimetric method.	Gentian Violet	49-63	tumor necrosis factor	Homo sapiens	0-9
12846833-6	2003	When proliferation was assessed by measuring [3H]thymidine incorporation into DNA or staining cells with crystal violet, GLP-2 produced a dose-dependent increase in both parameters.	Gentian Violet	105-119	mast cell protease 10	Rattus norvegicus	121-126
12167312-3	2002	In this report we describe how the molecular structure of four representative TAM(+) dyes (Crystal Violet, Ethyl Violet, Victoria blue R, and Victoria pure blue BO) affects their efficiency as mediators of the photoinduced inactivation of two model mitochondrial targets, hexokinase (HK) and DNA.	Gentian Violet	91-105	hexokinase 1	Homo sapiens	272-282
12167312-3	2002	In this report we describe how the molecular structure of four representative TAM(+) dyes (Crystal Violet, Ethyl Violet, Victoria blue R, and Victoria pure blue BO) affects their efficiency as mediators of the photoinduced inactivation of two model mitochondrial targets, hexokinase (HK) and DNA.	Gentian Violet	91-105	hexokinase 1	Homo sapiens	284-286
12947330-7	2003	Inhibition of JNK resulted in improved viability measured with crystal violet, decreased in situ DNA nick end labeling positivity, and decreased cleavage of poly (ADP-ribose) polymerase and caspase-3.	Gentian Violet	63-77	mitogen-activated protein kinase 8	Rattus norvegicus	14-17
12136286-7	2002	Cell death after TRAIL treatment of human RPE cells was measured by crystal violet staining.	Gentian Violet	68-82	TNF superfamily member 10	Homo sapiens	17-22
10847606-4	2000	Our experimental findings revealed that a mica surface treated with crystal violet, a cationic dye molecule, is suitable to the spin-coating procedure for stretching DNA.	Gentian Violet	68-82	MHC class I polypeptide-related sequence A	Homo sapiens	42-46
11876973-3	2000	(2) The adhesion function of immunomagnetic beads selected CD(34)(+) cells to fibronectin was detected by crystal violet staining in 5 untreated CML-CP patients and 5 healthy donors.	Gentian Violet	106-120	fibronectin 1	Homo sapiens	78-89
9400680-5	1997	First, HGF induces a 45% increase in [3H]thymidine incorporation and a 65% increase in cell number by crystal violet analysis at 10 ng/mL concentration, and the increase is dose dependent.	Gentian Violet	102-116	hepatocyte growth factor	Mus musculus	7-10
9684291-5	1998	Polymerase chain reaction amplification across the COII-tRNA(Lys) intergenic region of these individuals gives different ratios of the three product lengths that are dependent on the concentration of the DNA-binding dye crystal violet.	Gentian Violet	220-234	mitochondrially encoded cytochrome c oxidase II	Homo sapiens	51-55
9684291-5	1998	Polymerase chain reaction amplification across the COII-tRNA(Lys) intergenic region of these individuals gives different ratios of the three product lengths that are dependent on the concentration of the DNA-binding dye crystal violet.	Gentian Violet	220-234	mitochondrially encoded tRNA glycine	Homo sapiens	56-65
9805248-11	1998	Although gentian violet is a blue dye, as is methylene blue, it has marked destructive effects on the vas deferens.	Gentian Violet	9-23	arginine vasopressin	Rattus norvegicus	102-105
9483795-1	1998	In this study, we report the further characterization of the Saccharomyces cerevisiae crystal violet-resistance protein Sge1.	Gentian Violet	86-100	Sge1p	Saccharomyces cerevisiae S288C	120-124
9483795-4	1998	Here, we have demonstrated that Sge1 is not only a crystal violet-resistance protein, but that it also confers resistance to ethidium bromide and methylmethane sulfonate.	Gentian Violet	51-65	Sge1p	Saccharomyces cerevisiae S288C	32-36
9544439-7	1998	Sensitivity of actinomycin D-pretreated target cells studied for cytotoxic activity of a recombinant TNF-alpha was examined over 21 h with a crystal violet dye assay.	Gentian Violet	141-155	tumor necrosis factor	Mus musculus	101-110
9271105-5	1997	The isolated gene was found to be identical to SGE1, a partial multicopy suppressor of the gal11 mutation (Amakasu, H., Suzuki, Y., Nishizawa, M. and Fukasawa, T. Genetics 134, 675-683, 1993), that also confers crystal violet resistance to a supersensitive strain (Ehrenhofer-Murray, A. E., Wurgler, F. E. and Sengstag, C. Mol.	Gentian Violet	211-225	Sge1p	Saccharomyces cerevisiae S288C	47-51
9126875-8	1997	hGSTP 1-1 was not inhibited by Crystal Violet or by Ethyl Violet but was strongly inhibited by Malachite Green (Ki = 0.3 microM).	Gentian Violet	31-45	glutathione S-transferase pi 1	Homo sapiens	0-9
7889525-1	1995	We confirmed with the use of crystal violet bioassay the high susceptibility of mouse L929 cells to the cytotoxic action of recombinant tumor necrosis factor-alpha (TNF).	Gentian Violet	29-43	tumor necrosis factor	Mus musculus	136-163
7756645-9	1995	Fifth, the nonpermeable dye, crystal violet, almost completely quenched the fluorescence signal emitted by HUVEC-associated fluorescein isothiocyanate (FITC) HK.	Gentian Violet	29-43	kininogen 1	Homo sapiens	158-160
7889525-1	1995	We confirmed with the use of crystal violet bioassay the high susceptibility of mouse L929 cells to the cytotoxic action of recombinant tumor necrosis factor-alpha (TNF).	Gentian Violet	29-43	tumor necrosis factor	Mus musculus	165-168
8010055-3	1993	TNF activity was measured by crystal violet staining assay using L929 cells.	Gentian Violet	29-43	tumor necrosis factor	Mus musculus	0-3
33779139-0	2021	Crystal Violet-Sensitized Direct Z-Scheme Heterojunction Coupled with a G-Wire Superstructure for Photoelectrochemical Sensing of Uracil-DNA Glycosylase.	Gentian Violet	0-14	uracil DNA glycosylase	Homo sapiens	130-152
1478693-4	1992	Enhancement of TNF-alpha lysis by LPS occurred in several assays for determining TNF-alpha, including MTT cleavage, crystal violet staining and lactate dehydrogenase release.	Gentian Violet	116-130	tumor necrosis factor	Homo sapiens	15-24
1814006-2	1991	PA-I, the galactophilic lectin, exhibited both cytotoxic and cytostatic activities on these cells (tested by [3H]thymidine incorporation and by crystal violet vital staining).	Gentian Violet	144-158	serine (or cysteine) peptidase inhibitor, clade E, member 1	Mus musculus	0-4
33769618-4	2021	Furthermore, when arrays of vertically aligned Au NRs with large width (AVA-Au 120x90 NRs) are used as SERS substrates, they can achieve the ultralow limit of detection for crystal violet (10 -16 M) with good reliability and reproducibility, and the rapid detection and identification of residual harmful substances.	Gentian Violet	173-187	seryl-tRNA synthetase 2, mitochondrial	Homo sapiens	103-107
1919025-4	1991	High concentrations of crystal violet lowered the number of cells and gave a decreased amount of surface antigen (CD11b).	Gentian Violet	23-37	integrin subunit alpha M	Homo sapiens	114-119
2005381-3	1991	With this labeling it has been possible to demonstrate the constitutive endocytosis of class I MHC by fluorescence microscopy and by measuring the resistance to quenching by crystal violet of the internalized fl-beta 2m molecules.	Gentian Violet	174-188	beta-2 microglobulin	Mus musculus	212-219
2125621-8	1990	Comparison of absorbances at 595 nm after crystal violet staining of cells revealed differences in detection of TNF in plasmas compared to serum and in heated compared to nonheated samples.	Gentian Violet	42-56	tumor necrosis factor	Mus musculus	112-115
33779139-6	2021	Crystal violet is then conjugated into the G-quadruplex to amplify the PEC signal, where crystal violet generates excited electrons by capturing visible light and rapidly injects electrons into the conduction band of SnS2, suppressing the recombination of the photo-induced carrier.	Gentian Violet	0-14	sodium voltage-gated channel alpha subunit 11	Homo sapiens	217-221
33779139-6	2021	Crystal violet is then conjugated into the G-quadruplex to amplify the PEC signal, where crystal violet generates excited electrons by capturing visible light and rapidly injects electrons into the conduction band of SnS2, suppressing the recombination of the photo-induced carrier.	Gentian Violet	89-103	sodium voltage-gated channel alpha subunit 11	Homo sapiens	217-221
34778250-4	2021	Furthermore, the effects of TP53 on esophageal squamous cell carcinoma (ESCC) cell migration and proliferation were examined using the Transwell assay, scratch test, and crystal violet assay.	Gentian Violet	170-184	tumor protein p53	Homo sapiens	28-32
34969831-6	2022	To explore if the different analogs could affect the nAChR conformational state, the nAChR conformational-sensitive probe crystal violet (CrV) was used.	Gentian Violet	122-136	cholinergic receptor nicotinic alpha 4 subunit	Homo sapiens	53-58
34969831-6	2022	To explore if the different analogs could affect the nAChR conformational state, the nAChR conformational-sensitive probe crystal violet (CrV) was used.	Gentian Violet	122-136	cholinergic receptor nicotinic alpha 4 subunit	Homo sapiens	85-90
34969831-6	2022	To explore if the different analogs could affect the nAChR conformational state, the nAChR conformational-sensitive probe crystal violet (CrV) was used.	Gentian Violet	138-141	cholinergic receptor nicotinic alpha 4 subunit	Homo sapiens	53-58
34969831-6	2022	To explore if the different analogs could affect the nAChR conformational state, the nAChR conformational-sensitive probe crystal violet (CrV) was used.	Gentian Violet	138-141	cholinergic receptor nicotinic alpha 4 subunit	Homo sapiens	85-90
34896679-8	2022	Optimized substrate exhibited a high sensitivity with the detectable concentration of crystal violet (CV) down to 10-9 M and an excellent reproducibility proved by SERS mapping.	Gentian Violet	86-100	seryl-tRNA synthetase 2, mitochondrial	Homo sapiens	164-168
34547822-3	2021	Spike protein-expressing cells bound to hACE2 in the absence or presence of blocking antibodies were quantified by measuring the optical density of cell-associated crystal violet in a spectrophotometer.	Gentian Violet	164-178	surface glycoprotein	Severe acute respiratory syndrome coronavirus 2	0-5
34547822-3	2021	Spike protein-expressing cells bound to hACE2 in the absence or presence of blocking antibodies were quantified by measuring the optical density of cell-associated crystal violet in a spectrophotometer.	Gentian Violet	164-178	angiotensin converting enzyme 2	Homo sapiens	40-45
2788951-4	1989	LAK activity was enhanced by the presence of IL-2 in the crystal violet assay system, while it was suppressed by fresh autologous serum.	Gentian Violet	57-71	interleukin 2	Homo sapiens	45-49
34827217-8	2021	Crystal violet staining of the biofilm revealed that CL-PL combined with HBD2 effected a significant decrease of biofilm mass and increased the number of larger biofilm particles consistent with altered cohesion of formed biofilms.	Gentian Violet	0-14	defensin beta 4A	Homo sapiens	73-77
35287922-2	2022	Results showed that PA-beta-CD exhibited high adsorption capacities of 1095, 2005.58, 1736.32, and 1930.23 mg/g for methylene blue (MB), basic green 4 (MG), astrazon pink FG (FG), and crystal violet (MV), respectively.	Gentian Violet	184-198	ACD shelterin complex subunit and telomerase recruitment factor	Homo sapiens	23-30
35568216-8	2022	Moreover, the functionalized MDC was not very effective in the adsorption of cationic dyes with large sizes (like brilliant green, crystal violet, Janus green B, and rhodamine B) because of the limited pore size of the studied adsorbent FMDC (1.0).	Gentian Violet	131-145	C-C motif chemokine ligand 22	Homo sapiens	29-32
2680385-1	1989	A variety of organic compounds such as carbon tetrachloride, halothane, gentian violet, and benznidazole are reductively metabolized to free radicals by liver microsomal cytochrome P-450.	Gentian Violet	72-86	cytochrome P450 family 4 subfamily F member 3	Homo sapiens	170-186
34323037-4	2021	The eradicative effect of AZI-RHL NPs on P. aeruginosa biofilm was evaluated via crystal violet staining and SYTO 9/PI live/dead staining.	Gentian Violet	81-95	antizyme inhibitor 1	Homo sapiens	26-29
35216109-9	2022	Crystal violet assay demonstrated that combined application of IFN-beta and S100B (5-25 nM) eliminates their inhibitory effects on MCF-7 cell viability.	Gentian Violet	0-14	IFN1@	Homo sapiens	63-71
35216109-9	2022	Crystal violet assay demonstrated that combined application of IFN-beta and S100B (5-25 nM) eliminates their inhibitory effects on MCF-7 cell viability.	Gentian Violet	0-14	S100 calcium binding protein B	Homo sapiens	76-81
2477329-8	1989	The detection of IL 1 activity by crystal violet staining of human dermal fibroblasts was easier and faster than by measurement of thymidine incorporation of fibroblasts or mouse thymocytes; without loss of sensitivity, the sample capacity of the IL 1 assay could be enhanced, and the use of experimental animals was avoided.	Gentian Violet	34-48	interleukin 1 alpha	Homo sapiens	17-21
2543384-5	1989	Similar SOD enhancement was observed with dyes Rhodamine 123 and Gentian Violet.	Gentian Violet	65-79	superoxide dismutase 1	Homo sapiens	8-11
2716215-2	1989	Cytotoxic assay by crystal violet dye exclusion test showed that 21.0 +/- 4.0% and 34.8 +/- 4.7% of the cells were killed by 72 hours incubation with 100 ng/ml of rTNF alpha, alone and 1 ng/ml of ACD alone, respectively.	Gentian Violet	19-33	tumor necrosis factor	Rattus norvegicus	163-173
2987369-2	1985	Fifty percent CPE (CPE50) end points, calculated from optical density readings of crystal violet-stained monolayers in an automated spectrophotometer, represented 1.7 log reduction in viral yield (50-fold or 98% decrease).	Gentian Violet	82-96	carboxypeptidase E	Homo sapiens	14-17
3160687-5	1985	The recombinase-defective mutants were much more sensitive than the recA+ strain to crystal violet, kanamycin, and chloramphenicol, indicating altered membrane permeability.	Gentian Violet	84-98	recombinase	Escherichia coli	4-15
3772113-3	1986	The quantitation of cytolytic activity is based on the ability of TNF to lyse L-M cells in the presence of actinomycin D, as measured by crystal violet dye uptake of residual viable cells.	Gentian Violet	137-151	tumor necrosis factor	Mus musculus	66-69
2987369-2	1985	Fifty percent CPE (CPE50) end points, calculated from optical density readings of crystal violet-stained monolayers in an automated spectrophotometer, represented 1.7 log reduction in viral yield (50-fold or 98% decrease).	Gentian Violet	82-96	carboxypeptidase E	Homo sapiens	19-24
4945195-0	1971	Bacterial cell division regulation: physiological effects of crystal violet on Escherichia coli lon +  and lon -  strains.	Gentian Violet	61-75	putative ATP-dependent Lon protease	Escherichia coli	96-99
6181091-3	1982	Total incubation time was 26 h. IFN titers were calculated from optical density readings of crystal violet-stained monolayers in an automated spectrophotometer, which required less than 1 min to read each plate.	Gentian Violet	92-106	interferon alpha 1	Homo sapiens	32-35
372796-4	1979	The presence of S-9 in the in vitro cytogenetic assay and in the bacterial assays showed that the activity of gentian violet could be reduced or eliminated.	Gentian Violet	110-124	proteasome (prosome, macropain) 26S subunit, non-ATPase, 11	Mus musculus	16-19
6292686-2	1982	The triarylmethane dye, gentian violet, is shown to undergo a one-electron reduction by the cytochrome P-450 monooxygenase system to produce a carbon-centered free radical as demonstrated by direct electron spin resonance techniques.	Gentian Violet	24-38	cytochrome P450 family 20 subfamily A member 1	Homo sapiens	92-122
67737-1	1977	A modification of Wilson"s crystal violet staining for renin granules is able to show both centra and peripheral nerve fibres on paraffin sections with reproducible results.	Gentian Violet	27-41	renin	Homo sapiens	55-60
70939-0	1977	Non-specificity of crystal violet staining for renin granules.	Gentian Violet	19-33	renin	Homo sapiens	47-52
4945195-0	1971	Bacterial cell division regulation: physiological effects of crystal violet on Escherichia coli lon +  and lon -  strains.	Gentian Violet	61-75	putative ATP-dependent Lon protease	Escherichia coli	107-110
33181436-6	2020	The ability of an otc-deficient mutant (Deltaotc) to form a biofilm was significantly reduced compared to the wild-type (WT) strain, as determined by crystal violet staining.	Gentian Violet	150-164	ornithine transcarbamylase	Sus scrofa	18-21
13644613-0	1959	Absorption of vitamin B12 in a patient with intestinal stasis: improvement by gentian violet and antibiotics.	Gentian Violet	78-92	NADH:ubiquinone oxidoreductase subunit B3	Homo sapiens	22-25
33637374-11	2022	Crystal violet staining and MTT assay revealed that FGF-1 decreases LF cell size and inhibits their proliferation in a dose-dependent manner, whereas TGF-beta1 increases cell size and promotes proliferation.	Gentian Violet	0-14	fibroblast growth factor 1	Homo sapiens	52-57
33109352-0	2020	Retraction notice to "Adsorption of Crystal violet on raw and acid-treated montmorillonite, K10, in aqueous suspension" [J. Environ.	Gentian Violet	36-50	keratin 10	Homo sapiens	92-95
33171039-7	2020	Combined with the enrichment effect using a slippery liquid-infused porous surface, the lowest detection limits of crystal violet molecule could be down to 0.1 pM, demonstrating an excellent SERS sensitivity.	Gentian Violet	115-129	seryl-tRNA synthetase 2, mitochondrial	Homo sapiens	191-195
32154236-8	2020	Among known irritants, high concentrations of methyl violet and methylrosaniline decreased viability, lowered TEER, and increased IL-1alpha secretion in both RhE and FTS models, consistent with irritant properties.	Gentian Violet	46-59	interleukin 1 alpha	Homo sapiens	130-139
33583773-8	2020	The active ingredient crystal violet (MIC; 1 mu mL-1) as well as Je- fruit ethanol, Jf-leaf and fruit ethanol, Joso-leaf and fruit ethanol extracts (MIC; 16mu mL-1) have exhibited the highest antimicrobial activities (MIC; 16mu mL-1).	Gentian Violet	22-36	L1 cell adhesion molecule	Mus musculus	159-163
32518242-5	2020	The cytotoxic effect of Hsp-AuNPs on human breast cancer cell line (MDA-MB-231) was assessed using MTT and crystal violet assays.	Gentian Violet	107-121	heat shock protein 90 beta family member 2, pseudogene	Homo sapiens	24-27
32154236-8	2020	Among known irritants, high concentrations of methyl violet and methylrosaniline decreased viability, lowered TEER, and increased IL-1alpha secretion in both RhE and FTS models, consistent with irritant properties.	Gentian Violet	46-59	factor interacting with PAPOLA and CPSF1	Homo sapiens	158-161
32154236-8	2020	Among known irritants, high concentrations of methyl violet and methylrosaniline decreased viability, lowered TEER, and increased IL-1alpha secretion in both RhE and FTS models, consistent with irritant properties.	Gentian Violet	64-80	interleukin 1 alpha	Homo sapiens	130-139
32154236-8	2020	Among known irritants, high concentrations of methyl violet and methylrosaniline decreased viability, lowered TEER, and increased IL-1alpha secretion in both RhE and FTS models, consistent with irritant properties.	Gentian Violet	64-80	factor interacting with PAPOLA and CPSF1	Homo sapiens	158-161
31733192-7	2020	Moreover, decreased phosphorylation of p53(Ser15) and NFkappaB(Ser536) was required for GV-induced cell death.	Gentian Violet	88-90	tumor protein p53	Homo sapiens	39-42
32716348-5	2020	The biological functions of TRIB3 in the growth of HCC were determined using MTT and crystal violet assays.	Gentian Violet	85-99	tribbles pseudokinase 3	Homo sapiens	28-33
31569739-6	2019	This assay identified crystal violet as a strongly selective oligomer-indicator dye for lysozyme.	Gentian Violet	22-36	lysozyme	Homo sapiens	88-96
31527385-10	2019	The result of crystal violet staining revealed that it was significantly strengthened the cells growth kinetics when cultured with 160 ng/mL mNGF compared to PBS group.	Gentian Violet	14-28	nerve growth factor	Mus musculus	141-145
31961804-2	2019	The decoloration rate and chemical oxygen demand (COD) of wastewater were evaluated during plasma treatments with the initial concentration of methyl violet of 300 mg L-1.	Gentian Violet	143-156	L1 cell adhesion molecule	Homo sapiens	167-170
30961707-4	2019	It was found that the synthesised nanocomposite has excellent adsorption and photocatalytic degradation abilities for the removal of cationic dyes, methylene blue (MB) and crystal violet (CV) owing to its homogeneous mesoporosity with a BET surface area of 583.15 m2/g.	Gentian Violet	188-190	delta/notch like EGF repeat containing	Homo sapiens	237-240
31173226-6	2019	Following knockdown of UBE2T in 786-O cells using RNA interference technology, the proliferation and colony formation of cells were inhibited as determined by an MTT assay and crystal violet staining, respectively; however, the migration and invasion of 786-O cells were not affected, as determined by wound-healing assay and Transwell assays, respectively.	Gentian Violet	176-190	ubiquitin conjugating enzyme E2 T	Homo sapiens	23-28
31470589-2	2019	The resulting Cu/gCN hybrids showed strong optical absorption in the visible to near-IR range and exhibited surface-enhanced Raman or resonance Raman scattering (SERS or SERRS) enhancement for crystal violet (CV), methylene blue (MB), and rhodamine 6G (R6G) used as probe analyte molecules adsorbed on the surface.	Gentian Violet	193-207	seryl-tRNA synthetase 2, mitochondrial	Homo sapiens	162-166
31470589-2	2019	The resulting Cu/gCN hybrids showed strong optical absorption in the visible to near-IR range and exhibited surface-enhanced Raman or resonance Raman scattering (SERS or SERRS) enhancement for crystal violet (CV), methylene blue (MB), and rhodamine 6G (R6G) used as probe analyte molecules adsorbed on the surface.	Gentian Violet	193-207	seryl-tRNA synthetase 2, mitochondrial	Homo sapiens	170-175
31470589-2	2019	The resulting Cu/gCN hybrids showed strong optical absorption in the visible to near-IR range and exhibited surface-enhanced Raman or resonance Raman scattering (SERS or SERRS) enhancement for crystal violet (CV), methylene blue (MB), and rhodamine 6G (R6G) used as probe analyte molecules adsorbed on the surface.	Gentian Violet	209-211	seryl-tRNA synthetase 2, mitochondrial	Homo sapiens	162-166
31470589-2	2019	The resulting Cu/gCN hybrids showed strong optical absorption in the visible to near-IR range and exhibited surface-enhanced Raman or resonance Raman scattering (SERS or SERRS) enhancement for crystal violet (CV), methylene blue (MB), and rhodamine 6G (R6G) used as probe analyte molecules adsorbed on the surface.	Gentian Violet	209-211	seryl-tRNA synthetase 2, mitochondrial	Homo sapiens	170-175
31502129-4	2019	Colorimetric analysis with crystal violet dye showed that the number of cells after 10-days culturing was higher in the CD133+/high population in both cell lines.	Gentian Violet	27-41	prominin 1	Homo sapiens	120-125
31460175-3	2019	The MOF had been employed as a photocatalyst for the photodegradation of model organic dyes rhodamine B and methyl violet in light.	Gentian Violet	108-121	lysine acetyltransferase 8	Homo sapiens	4-7
30800059-5	2019	Fluorescence measurements using the conformational sensitive probe crystal violet (CrV) revealed that in the presence of Abeta alpha7 undergoes concentration-dependent conformational changes.	Gentian Violet	67-81	amyloid beta precursor protein	Homo sapiens	121-126
30736020-7	2019	Moreover, the SERS performance of these monolayers were evaluated by calculating the analytical enhancement factor using crystal violet as probe molecule.	Gentian Violet	121-135	seryl-tRNA synthetase 2, mitochondrial	Homo sapiens	14-18
30055356-2	2018	It exhibits excellent photocatalytic performances for the photocatalytic oxidation of crystal violet and reduction of Cr6+, which is ascribed to the suppression of charge recombination, and increasing lifetime of the charge carriers confirmed by the result of time-resolved fluorescence emission decay spectra and photoelectrochemical measures.	Gentian Violet	86-100	teratocarcinoma-derived growth factor 1 pseudogene 6	Homo sapiens	118-121
30675884-1	2019	Duplex-connected G-quadruplex (dsG4) has a more evident promotion of the fluorescent emission of crystal violet than pure G-quadruplex (G4), which is firstly found and investigated systematically using fluorescence spectra, circular dichroism, and density functional theory.	Gentian Violet	97-111	desmoglein 4	Homo sapiens	31-35
30167641-8	2018	Furthermore, GV induced 4 to 6 times greater apoptosis in CTCL lines than in normal keratinocytes, suggesting a favorable topical toxicity profile.	Gentian Violet	13-15	TSPY like 2	Homo sapiens	58-62
30216851-3	2018	Among sixteen compounds, [1-hydroxy-2-(pyrimidin-2-ylamino)ethane-1,1-diyl]bis(phosphonic acid) (10) was effective in reducing PC3 and RAW 264.7 cell number in crystal-violet and cell-dehydrogenase activity assays at 100 muM concentration.	Gentian Violet	160-174	chromobox 8	Mus musculus	127-130
30064080-2	2018	Eight compounds, five amine and three phthalimide derivatives, inhibited bovine pancreatic DNase I with an IC50 below 200 microM, being more effective than referent inhibitor crystal violet.	Gentian Violet	175-189	deoxyribonuclease 1	Bos taurus	91-98
30132504-6	2018	Furthermore, the inhibition of Cx43 resulted in a 50+-7% decrease in cell proliferation, determined using a crystal violet assay, a 48+-5% decrease in migration, determined using a migration assay, and a 49+-6% decrease in endothelial tube formation, determined using a Matrigel assay, compared with the control.	Gentian Violet	108-122	gap junction protein alpha 1	Homo sapiens	31-35
30121403-6	2018	The luminescent properties of MOF-treated fingermarks persevered for at least 12 months, providing great alternative for commonly used organic dyes such as Basic Yellow 40 and Gentian Violet.	Gentian Violet	176-190	lysine acetyltransferase 8	Homo sapiens	30-33
30167641-12	2018	In ex vivo studies, 1-mumol/L GV induced up to 90% CTCL apoptosis in Sezary blood cells.	Gentian Violet	30-32	TSPY like 2	Homo sapiens	51-55
29580624-5	2018	All three DPP IV drugs tested reduced biofilm formation as determined by crystal violet staining.	Gentian Violet	73-87	dipeptidyl peptidase 4	Homo sapiens	10-16
30460115-2	2018	Cell growth and proliferation were significantly reduced in the Kras mutant colorectal carcinoma cell lines following treatment with 50 mug/mL bromelain as assessed by crystal violet staining and a proliferation assay.	Gentian Violet	168-182	KRAS proto-oncogene, GTPase	Homo sapiens	64-68
30024592-11	2018	Furthermore, crystal violet staining showed that the dltA mutant formed significantly less biofilm as compared to wild-type strains.	Gentian Violet	13-27	dihydrolipoamide S-acetyltransferase	Homo sapiens	53-57
30363977-5	2018	Crystal violet staining showed that the clone-forming ability of BMSCs in the coculture group was also enhanced and mRNA levels of Sox2, Nanog, and Oct4 were significantly upregulated in the coculture group.	Gentian Violet	0-14	SRY-box transcription factor 2	Homo sapiens	131-135
30363977-5	2018	Crystal violet staining showed that the clone-forming ability of BMSCs in the coculture group was also enhanced and mRNA levels of Sox2, Nanog, and Oct4 were significantly upregulated in the coculture group.	Gentian Violet	0-14	Nanog homeobox	Homo sapiens	137-142
30363977-5	2018	Crystal violet staining showed that the clone-forming ability of BMSCs in the coculture group was also enhanced and mRNA levels of Sox2, Nanog, and Oct4 were significantly upregulated in the coculture group.	Gentian Violet	0-14	POU class 5 homeobox 1	Homo sapiens	148-152
28071239-3	2017	Thus, low concentrations of AsV stimulate cell proliferation, as shown by phase-contrast microscopy, cell counting with trypan blue, and crystal violet assay, whereas high concentrations induce cell death associated with a loss of cell adhesion.	Gentian Violet	137-151	SRC proto-oncogene, non-receptor tyrosine kinase	Homo sapiens	28-31
29086095-7	2017	Figures of merit of the model including a limit of detection of 3.0 and 2.5 ng mL-1 for crystal violet and malachite green, respectively, were estimated using the MCR-ALS method.	Gentian Violet	88-102	L1 cell adhesion molecule	Mus musculus	79-83
29039537-4	2017	In the present study, it was demonstrated that juglone sensitized melanoma cells to TRAIL-induced cytotoxicity by MTT and crystal violet assays.	Gentian Violet	122-136	TNF superfamily member 10	Homo sapiens	84-89
28266094-7	2017	Furthermore, the SERS activity of these Au NS is analysed by using glutathione and crystal violet as analytes and by employing glass and ITO as substrates.	Gentian Violet	83-97	seryl-tRNA synthetase 2, mitochondrial	Homo sapiens	17-21
28867801-0	2017	An Unusual Dimeric Inhibitor of Acetylcholinesterase: Cooperative Binding of Crystal Violet.	Gentian Violet	77-91	acetylcholinesterase (Cartwright blood group)	Homo sapiens	32-52
28867801-3	2017	In a previous high throughput screening campaign, we identified the dye crystal violet (CV) as an inhibitor of AChE.	Gentian Violet	72-86	acetylcholinesterase (Cartwright blood group)	Homo sapiens	111-115
28427622-0	2017	Efficient removal of crystal violet and methylene blue from wastewater by ultrasound nanoparticles Cu-MOF in comparison with mechanosynthesis method.	Gentian Violet	21-35	lysine acetyltransferase 8	Homo sapiens	102-105
28427622-2	2017	Herein, we study uptake and release properties of crystal violet (CV) and methylene blue (MB) from ultrasound nano-CuBTC MOF in comparison with mechanosynthesis method (bulk structure).	Gentian Violet	50-64	lysine acetyltransferase 8	Homo sapiens	121-124
28427622-2	2017	Herein, we study uptake and release properties of crystal violet (CV) and methylene blue (MB) from ultrasound nano-CuBTC MOF in comparison with mechanosynthesis method (bulk structure).	Gentian Violet	66-68	lysine acetyltransferase 8	Homo sapiens	121-124
28670384-4	2017	Crystal violet staining was carried out to detect the cytopathic effect of Ad-survivin-ZD55-TAp63 in human colorectal cancer cell line HCT-116 and normal liver cell line L-O2.	Gentian Violet	0-14	baculoviral IAP repeat-containing 5	Mus musculus	78-86
28529588-6	2017	The proliferation and colony formation abilities were significantly inhibited in CALB1-deficient U2OS cells compared with the control, as measured using an MTT assay and crystal violet staining.	Gentian Violet	170-184	calbindin 1	Homo sapiens	81-86
28472126-6	2017	The binding biomass of Staphylococcus aureus to human fibronectin was investigated by crystal violet staining and confocal laser scanning microscopy and the adherent force was measured by atomic force microscope (AFM).	Gentian Violet	86-100	fibronectin 1	Homo sapiens	54-65
28471113-7	2017	The antibiofilm effect of HMGN2 was investigated using a crystal violet assay and electron microscopy scanning.	Gentian Violet	57-71	high mobility group nucleosomal binding domain 2	Homo sapiens	26-31
28471113-12	2017	The antibiofilm effect of HMGN2 on E. coli K12 was confirmed by crystal violet staining and scanning electron microscopy.	Gentian Violet	64-78	high mobility group nucleosomal binding domain 2	Homo sapiens	26-31
28117567-3	2017	The nanonetwork was tested for SERS detection of crystal violet (CV) and glutathione (GSH) at two excitation wavelengths, 532 and 785 nm.	Gentian Violet	49-63	seryl-tRNA synthetase 2, mitochondrial	Homo sapiens	31-35
28229133-4	2017	The Raman and IR spectra of crystal violet (CV) revealed a noticeable enhancement of the analyte vibrational signal intensity in SERS and SEIRA studies resulting from the presence of the nanostars.	Gentian Violet	28-42	seryl-tRNA synthetase 2, mitochondrial	Homo sapiens	129-133
28117567-3	2017	The nanonetwork was tested for SERS detection of crystal violet (CV) and glutathione (GSH) at two excitation wavelengths, 532 and 785 nm.	Gentian Violet	65-67	seryl-tRNA synthetase 2, mitochondrial	Homo sapiens	31-35
27659310-10	2016	LL-37 effectively enhanced the bactericidal activity of EGCG against biofilm formation and preformed biofilms as determined by quantitative crystal violet staining and field emission-scanning electron microscopy.	Gentian Violet	140-154	cathelicidin antimicrobial peptide	Homo sapiens	0-5
27857347-3	2016	The fabricated MoS<sub>2</sub>@Au NPs with higher surface area exhibit excellent Raman enhanced effect for aromatic organic molecules (rhodamine 6G and crystal violet) and achieve the best when the monolayer MoS<sub>2</sub>@AuNPs was obtained.	Gentian Violet	164-178	MOS proto-oncogene, serine/threonine kinase	Homo sapiens	15-18
27857347-3	2016	The fabricated MoS<sub>2</sub>@Au NPs with higher surface area exhibit excellent Raman enhanced effect for aromatic organic molecules (rhodamine 6G and crystal violet) and achieve the best when the monolayer MoS<sub>2</sub>@AuNPs was obtained.	Gentian Violet	164-178	MOS proto-oncogene, serine/threonine kinase	Homo sapiens	220-223
27373978-0	2016	Down-Regulation of SOX2 Underlies the Inhibitory Effects of the Triphenylmethane Gentian Violet on Melanoma Cell Self-Renewal and Survival.	Gentian Violet	81-95	SRY-box transcription factor 2	Homo sapiens	19-23
27333825-4	2016	The positive effects of YPEL4 on cell proliferation were detected by XTT assay and crystal violet staining.	Gentian Violet	83-97	yippee like 4	Homo sapiens	24-29
27417255-2	2016	SYD-1 was able to decrease the viability of cultured HepG2 cells in a dose-dependent manner, as assessed by MTT, LDH release and dye with crystal violet assays, but no effect was observed on suspended cells after 1-40 min of treatment.	Gentian Violet	138-152	synapse defective Rho GTPase homolog 1	Homo sapiens	0-5
26892809-9	2016	Furthermore, depletion of CAS by RNAi in the BRAF(V600E)-positive PTC cell line B-CPAP led to reduced tumor cell growth measured by crystal violet assays.	Gentian Violet	132-146	chromosome segregation 1 like	Homo sapiens	26-29
27171384-10	2016	Crystal violet staining revealed fewer cells and significantly reduced alkaline phosphatase positive mineralized nodules in SCT and SCD that was rescued by IGF1 treatment.	Gentian Violet	0-14	insulin-like growth factor 1	Mus musculus	156-160
27043295-8	2016	In addition, crystal violet staining suggested CTHRC1 silencing inhibited migration of U2OS and SW1353 cells.	Gentian Violet	13-27	collagen triple helix repeat containing 1	Homo sapiens	47-53
26892809-9	2016	Furthermore, depletion of CAS by RNAi in the BRAF(V600E)-positive PTC cell line B-CPAP led to reduced tumor cell growth measured by crystal violet assays.	Gentian Violet	132-146	B-Raf proto-oncogene, serine/threonine kinase	Homo sapiens	45-50
26892809-9	2016	Furthermore, depletion of CAS by RNAi in the BRAF(V600E)-positive PTC cell line B-CPAP led to reduced tumor cell growth measured by crystal violet assays.	Gentian Violet	132-146	centromere protein J	Homo sapiens	82-86
26119274-7	2015	METHODS: In this study, we evaluated the effect of HBD-3 combined with UTMD on two tested Staphylococcus by the spread plate method, crystal violet staining, confocal laser scanning microscopy, scanning electron microscopy, and real-time polymerase chain reaction.	Gentian Violet	133-147	defensin beta 103B	Homo sapiens	51-56
25201467-3	2015	Here we demonstrate successful FCS measurements on a 1 muM solution of crystal violet (CV) dye in glycerol using a gold nanorod antenna.	Gentian Violet	71-85	latexin	Homo sapiens	55-58
26177467-5	2015	Here, we studied the effect of in vitro treatment with the redox-modulating triphenylmethane dyes, Gentian Violet and Brilliant Green, and nitroxide Tempol on IKKepsilon expression and cell proliferation in the human breast cancer epithelial cell lines exhibiting amplification of IKKepsilon, MCF-7 and ZR75.1.	Gentian Violet	99-113	inhibitor of nuclear factor kappa B kinase subunit epsilon	Homo sapiens	159-169
26177467-6	2015	We show that Gentian Violet, Brilliant Green and Tempol significantly decrease intracellular superoxide anion levels and inhibit IKKepsilon expression and cell viability.	Gentian Violet	13-27	inhibitor of nuclear factor kappa B kinase subunit epsilon	Homo sapiens	129-139
26177467-7	2015	Treatment with Gentian Violet and Brilliant Green was associated with a reduced cyclin D1 expression and activation of caspase 3 and/or 7.	Gentian Violet	15-29	cyclin D1	Homo sapiens	80-89
26177467-7	2015	Treatment with Gentian Violet and Brilliant Green was associated with a reduced cyclin D1 expression and activation of caspase 3 and/or 7.	Gentian Violet	15-29	caspase 3	Homo sapiens	119-128
26269109-7	2015	The SERS spectra of crystal violet (CV) show that all the silver colloids synthesized at various temperatures exhibit good enhancement factors and that the colloids prepared at lower bath temperatures have a higher enhancement factor.	Gentian Violet	20-34	seryl-tRNA synthetase 2, mitochondrial	Homo sapiens	4-8
25679234-8	2015	To prove blockage of the CSF by the septum and to decide on the extent of arachnoid lysis, regional CSF flow around the arachnoid septum was visualized by subarachnoid injection of gentian violet solution close to the web.	Gentian Violet	181-195	colony stimulating factor 2	Homo sapiens	100-103
25820907-7	2015	Lactate dehydrogenase release and crystal violet staining revealed that IL-27 or IL-6 significantly attenuated severe hypoxia (SH, 2 % O2)-induced cell damage in H9c2 cardiomyoblasts and primary rat neonatal cardiomyocytes.	Gentian Violet	34-48	interleukin 27	Mus musculus	72-77
25820907-7	2015	Lactate dehydrogenase release and crystal violet staining revealed that IL-27 or IL-6 significantly attenuated severe hypoxia (SH, 2 % O2)-induced cell damage in H9c2 cardiomyoblasts and primary rat neonatal cardiomyocytes.	Gentian Violet	34-48	interleukin 6	Mus musculus	81-85
25981393-4	2015	We also prepare dye-based SERS nanoprobes by sandwiching a typical Raman reporter such as Rhodamine B (RhB), Crystal Violet (CV) and Rhodamine 6G (R6G) between the nanostars and the nGO coating.	Gentian Violet	109-123	seryl-tRNA synthetase 1	Homo sapiens	26-30
25981393-4	2015	We also prepare dye-based SERS nanoprobes by sandwiching a typical Raman reporter such as Rhodamine B (RhB), Crystal Violet (CV) and Rhodamine 6G (R6G) between the nanostars and the nGO coating.	Gentian Violet	125-127	seryl-tRNA synthetase 1	Homo sapiens	26-30
32262126-2	2015	In this submission, the model drug tris (4-(dimenthylamino)phenyl)methylium chloride (Crystal Violet, CV) was loaded into the microgel layer of the device by electrostatic interaction of its positive charge with the negative charges on the deprotonated AAc groups on the microgels at pH > 6.5.	Gentian Violet	86-100	glycine-N-acyltransferase	Homo sapiens	253-256
25889525-7	2015	Crystal violet staining indicated that colony numbers and sizes were both reduced after knock-down of USP39.	Gentian Violet	0-14	ubiquitin specific peptidase 39	Homo sapiens	102-107
25192200-4	2014	The degradation of the typical dye molecule crystal violet (CV), as an example, is investigated in the presence of the as-prepared Fe3O4@SiO2@TiO2@Ag composite structure, which exhibits high catalytic activity and good SERS performance.	Gentian Violet	44-58	seryl-tRNA synthetase 2, mitochondrial	Homo sapiens	219-223
25495142-6	2015	After capped with crystal violet (CV), polyethylene glycol, and EGFR mutation specific antibody, the AuNC-EGFR had excellent surface-enhanced Raman scattering (SERS) activity and EGFR mutation targeted recognition capability in lung cancer cells.	Gentian Violet	18-32	epidermal growth factor receptor	Homo sapiens	106-110
25495142-6	2015	After capped with crystal violet (CV), polyethylene glycol, and EGFR mutation specific antibody, the AuNC-EGFR had excellent surface-enhanced Raman scattering (SERS) activity and EGFR mutation targeted recognition capability in lung cancer cells.	Gentian Violet	18-32	epidermal growth factor receptor	Homo sapiens	106-110
25495142-6	2015	After capped with crystal violet (CV), polyethylene glycol, and EGFR mutation specific antibody, the AuNC-EGFR had excellent surface-enhanced Raman scattering (SERS) activity and EGFR mutation targeted recognition capability in lung cancer cells.	Gentian Violet	34-36	epidermal growth factor receptor	Homo sapiens	106-110
25495142-6	2015	After capped with crystal violet (CV), polyethylene glycol, and EGFR mutation specific antibody, the AuNC-EGFR had excellent surface-enhanced Raman scattering (SERS) activity and EGFR mutation targeted recognition capability in lung cancer cells.	Gentian Violet	34-36	epidermal growth factor receptor	Homo sapiens	106-110
25665417-4	2014	The adhesion ability of osteoclasts and mRNA and the protein expressions of integrin alpha(v) and beta3 were examined by crystal violet staining, real-time fluorescence quantitative polymerase chain reaction, Western blot analysis, and immunofluorescent chemistry.	Gentian Violet	121-135	integrin alpha V	Mus musculus	76-103
25192200-4	2014	The degradation of the typical dye molecule crystal violet (CV), as an example, is investigated in the presence of the as-prepared Fe3O4@SiO2@TiO2@Ag composite structure, which exhibits high catalytic activity and good SERS performance.	Gentian Violet	60-62	seryl-tRNA synthetase 2, mitochondrial	Homo sapiens	219-223
24762637-1	2014	Highly diluted solutions of Gentian Violet and Evans Blue were used to visualize the elastin network in viable porcine right common carotid artery (RCCA) preparations.	Gentian Violet	28-42	elastin	Homo sapiens	85-92
25260219-9	2014	The test of FA-lambda-Car-hNP anticancer activity on human osteosarcoma MG-63 cell line showed cell viabilities of 13% and 100% with and without Dox, respectively, as determined by crystal violet staining after 24 h of incubation.	Gentian Violet	181-195	kallikrein related peptidase 8	Homo sapiens	26-29
25262081-0	2014	SERS active Ag encapsulated Fe@SiO2 nanorods in electromagnetic wave absorption and crystal violet detection.	Gentian Violet	84-98	seryl-tRNA synthetase 2, mitochondrial	Homo sapiens	0-4
25262081-8	2014	The synthesized Ag encapsulated Fe@SiO2 nanostructure also exhibited the SERS phenomena, which is useful in the detection of the carcinogenic dye crystal violet (CV) upto the concentration of 10(-10)M. All these findings clearly demonstrate that the Ag encapsulated Fe@SiO2 nanostructure could efficiently be used in the environmental remediation.	Gentian Violet	146-160	seryl-tRNA synthetase 2, mitochondrial	Homo sapiens	73-77
25262081-8	2014	The synthesized Ag encapsulated Fe@SiO2 nanostructure also exhibited the SERS phenomena, which is useful in the detection of the carcinogenic dye crystal violet (CV) upto the concentration of 10(-10)M. All these findings clearly demonstrate that the Ag encapsulated Fe@SiO2 nanostructure could efficiently be used in the environmental remediation.	Gentian Violet	162-164	seryl-tRNA synthetase 2, mitochondrial	Homo sapiens	73-77
25220241-8	2014	As quantified by crystal violet assay, biofilm formation of the glpD-deficient KIM6+ mutant was mildly repressed; whereas, chromosomal restoration of glpD in CO92 resulted in a significant increase in biofilm formation.	Gentian Violet	17-31	glpD	Yersinia pestis CO92	64-68
25033454-7	2014	The effect of leptin on the proliferation, differentiation and migration of human oral mucosal epithelial cells (RT7 cells) was investigated using crystal violet staining, reverse transcription polymerase chain reaction (RT-PCR) and a wound healing assay, respectively.	Gentian Violet	147-161	leptin	Homo sapiens	14-20
24925370-7	2014	The effect of SHH overexpression in cells after treatment with paclitaxel was measured by MTT assay, crystal violet assay and flow cytometry.	Gentian Violet	101-115	sonic hedgehog signaling molecule	Homo sapiens	14-17
23996004-5	2014	Exposure of the cells to TNF-alpha significantly decreased cell viability, as shown with crystal violet staining.	Gentian Violet	89-103	tumor necrosis factor	Homo sapiens	25-34
25818744-8	2014	The effect of SNHG1 on proliferation was evaluated by cell count and crystal violet stains.	Gentian Violet	69-83	small nucleolar RNA host gene 1	Homo sapiens	14-19
24535435-5	2014	In this study, we examined the effect of GV on wild-type (wt) p53 activity in cancer cells.	Gentian Violet	41-43	tumor protein p53	Homo sapiens	62-65
24535435-6	2014	We found that GV was able to overcome the inhibitory effect of the NADPH oxidase Nox1 on p53 transcriptional activity.	Gentian Violet	14-16	NADPH oxidase 1	Homo sapiens	81-85
24535435-6	2014	We found that GV was able to overcome the inhibitory effect of the NADPH oxidase Nox1 on p53 transcriptional activity.	Gentian Violet	14-16	tumor protein p53	Homo sapiens	89-92
24535435-7	2014	For the first time we show that GV was able to directly induce p53/DNA binding and transcriptional activity.	Gentian Violet	32-34	tumor protein p53	Homo sapiens	63-66
24535435-8	2014	In vitro, GV markedly induced cancer cell death and apoptotic marker PARP cleavage in wtp53-carrying cells.	Gentian Violet	10-12	poly(ADP-ribose) polymerase 1	Homo sapiens	69-73
22925909-3	2012	SERS measurements using crystal violet as an analyte showed that SERS intensities of bimetallic films were enhanced significantly compared with that of pure Ag films and related mechanisms were discussed.	Gentian Violet	24-38	seryl-tRNA synthetase 2, mitochondrial	Homo sapiens	0-4
24202965-5	2014	The effects of FOXO1 on cell growth and CDDP cytotoxicity were assessed by crystal violet assay.	Gentian Violet	75-89	forkhead box O1	Homo sapiens	15-20
23666064-4	2013	The in vitro anti PC ability of ZD55-IL-24 was tested by MTT, crystal violet staining and apoptosis assays.	Gentian Violet	62-76	interleukin 24	Mus musculus	37-42
23817042-5	2013	Especially, phosphorylation of Tyr925-FAK that is required for full activation of FAK was nearly completely suppressed even with 1nM of methyl violet 2B in A375P cancer cells.	Gentian Violet	136-149	protein tyrosine kinase 2	Homo sapiens	38-41
23817042-5	2013	Especially, phosphorylation of Tyr925-FAK that is required for full activation of FAK was nearly completely suppressed even with 1nM of methyl violet 2B in A375P cancer cells.	Gentian Violet	136-149	protein tyrosine kinase 2	Homo sapiens	82-85
23577779-7	2013	In addition, it was shown that SP reduces Anti-Fas-induced decrease in cell viability as shown with crystal violet assay.	Gentian Violet	100-114	tachykinin precursor 1	Homo sapiens	31-33
23336301-7	2013	Uniform Au nanorosettes could be easily deposited on the Si substrate by drop-casting and were subsequently used as highly active SERS substrates for the detection of methylene blue and crystal violet by Raman spectroscopy.	Gentian Violet	186-200	seryl-tRNA synthetase 2, mitochondrial	Homo sapiens	130-134
22750966-6	2012	Anticancer drug sensitivity of cells preincubated with or without recombinant annexin II (rANX II) was measured using crystal violet assay and colony survival assay.	Gentian Violet	118-132	annexin A2	Homo sapiens	78-88
25056540-0	2014	Suppression of NF-kappaB activation by gentian violet promotes osteoblastogenesis and suppresses osteoclastogenesis.	Gentian Violet	39-53	nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105	Mus musculus	15-24
25056540-7	2014	These actions stem from the capacity of GV to suppress activation of the nuclear factor kappa B (NF-kappaB) signal transduction pathway that is required for osteoclastogenesis, but inhibitory to osteoblast differentiation and activity.	Gentian Violet	40-42	nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105	Mus musculus	73-95
25056540-7	2014	These actions stem from the capacity of GV to suppress activation of the nuclear factor kappa B (NF-kappaB) signal transduction pathway that is required for osteoclastogenesis, but inhibitory to osteoblast differentiation and activity.	Gentian Violet	40-42	nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105	Mus musculus	97-106
23910095-4	2013	We identified two compounds that inhibited the interaction between mAGSkp2-Cks1 and p27(Kip1): linichlorin A and gentian violet.	Gentian Violet	113-127	CDC28 protein kinase regulatory subunit 1B pseudogene 7	Homo sapiens	75-79
23910095-4	2013	We identified two compounds that inhibited the interaction between mAGSkp2-Cks1 and p27(Kip1): linichlorin A and gentian violet.	Gentian Violet	113-127	dynactin subunit 6	Homo sapiens	84-87
23910095-4	2013	We identified two compounds that inhibited the interaction between mAGSkp2-Cks1 and p27(Kip1): linichlorin A and gentian violet.	Gentian Violet	113-127	cyclin dependent kinase inhibitor 1B	Homo sapiens	88-92
23659187-2	2013	Spin-casting a 5 nm film of crystal violet upon these nanoparticles permitted the demonstration of surface-enhanced Raman spectra, fluorescence, and degradation following excitation by a HeCd laser operating at 325 nm.	Gentian Violet	28-42	spindlin 1	Homo sapiens	0-4
23404930-4	2013	METHODS: Substrate specificities and reaction pathways of MPO were investigated for new MPO substrates: crystal violet, leuco crystal violet, fast blue RR (4-benzoylamino-2,5-dimethoxybenzenediazonium chloride hemi(zinc chloride) salt) and various systematically substituted model substrates based on 2,7-dihydroxy-1-(4-hydroxyphenylazo)naphtalene-3,6-disulphonic acid.	Gentian Violet	104-118	myeloperoxidase	Homo sapiens	58-61
22925909-3	2012	SERS measurements using crystal violet as an analyte showed that SERS intensities of bimetallic films were enhanced significantly compared with that of pure Ag films and related mechanisms were discussed.	Gentian Violet	24-38	seryl-tRNA synthetase 2, mitochondrial	Homo sapiens	65-69
23240413-5	2012	To test the SERS activity of the nano-silver film, crystal violet and serum of healthy person were used as probe molecules and the high quality SERS spectra were obtained.	Gentian Violet	51-65	seryl-tRNA synthetase 2, mitochondrial	Homo sapiens	12-16
22853858-7	2012	Oncolytic activity in the pancreatic cancer cells was determined with the Ad5/3-CXCR4-E1A oncolytic Ad by a crystal violet staining method.	Gentian Violet	108-122	Alzheimer disease, familial, type 5	Homo sapiens	74-77
22879891-7	2012	Crystal violet staining showed significantly less biofilm formation in the presence of OPN, as compared to biofilms grown without OPN or biofilms grown in the presence of caseinoglycomacropeptide, another phosphorylated milk protein.	Gentian Violet	0-14	secreted phosphoprotein 1	Homo sapiens	87-90
22503318-3	2012	METHODS: IFN-expressing vectors were tested in vitro with the use of 4 PDAc cell lines with cytocidal effect measured by crystal violet and colorimetrically and IFN production assayed by ELISA.	Gentian Violet	121-135	interferon alpha 1	Homo sapiens	9-12
23610669-2	2012	This study investigates the effect of a gentian violet ink marker pen, a common surgical marker, on the viability of the tissue and cells of tendon.	Gentian Violet	40-54	proprotein convertase subtilisin/kexin type 1 inhibitor	Homo sapiens	66-69
23193918-6	2012	The effects of reexpressed WIF1 on EC109 cell proliferation and migration were investigated using crystal violet and wound healing assay, respectively.	Gentian Violet	98-112	WNT inhibitory factor 1	Homo sapiens	27-31
21377506-6	2011	The results showed that the methylene blue derivatives 6a-c were able to bind to the c-myc G-quadruplex with greater binding affinity compared to the known G-quadruplex binding ligand, crystal violet.	Gentian Violet	185-199	MYC proto-oncogene, bHLH transcription factor	Homo sapiens	85-90
20951021-5	2011	Additionally, crystal violet and capillary-like tube formation assays indicated that denbinobin selectively inhibits insulin-like growth factor-1 (IGF-1)-induced proliferation (GI50=1.3x10-8 M) and tube formation of human umbilical vascular endothelial cells (HUVECs) without influencing the effect of epidermal growth factor; vascular endothelial growth factor and basic fibroblast growth factor.	Gentian Violet	14-28	insulin like growth factor 1	Homo sapiens	147-152
21335346-16	2011	CONCLUSION: Chondrocyte viability is significantly reduced when cells are cultured in vitro on collagen membranes marked with methylene blue and crystal violet pen ink.	Gentian Violet	145-159	proprotein convertase subtilisin/kexin type 1 inhibitor	Homo sapiens	160-163
22761781-10	2012	Reduction of endogenous mitochondrial TRX2 levels by the cationic triphenylmethane gentian violet (GV) promoted modification of PRX3 by TS and significantly enhanced its cytotoxic activity.	Gentian Violet	83-97	thioredoxin 2	Homo sapiens	38-42
22761781-10	2012	Reduction of endogenous mitochondrial TRX2 levels by the cationic triphenylmethane gentian violet (GV) promoted modification of PRX3 by TS and significantly enhanced its cytotoxic activity.	Gentian Violet	99-101	thioredoxin 2	Homo sapiens	38-42
20395135-5	2010	Furthermore, experiments of crystal violet degradation under Xe lamp irradiation indicate superior photocatalytic activity of BNP-TiO(2), of which the degradation rate is almost three times that of common TiO(2).	Gentian Violet	28-42	natriuretic peptide B	Homo sapiens	126-129
21478242-6	2011	DB745B showed higher in vitro efficacy than the reference drugs used to treat patients (benznidazole IC50= 12.94 muM) and to prevent blood bank infection (gentian violet IC50= 30.6 muM).	Gentian Violet	155-169	latexin	Homo sapiens	181-184
20066520-9	2011	Crystal violet assay showed that LBP had a long-term anti-proliferative effect.	Gentian Violet	0-14	lipopolysaccharide binding protein	Homo sapiens	33-36
21164723-2	2010	The tip-enhanced Raman scattering from crystal violet molecules is found to be almost an order of magnitude higher from the bridged cones than from individual cones.	Gentian Violet	39-53	TOR signaling pathway regulator	Homo sapiens	4-7
20514515-4	2011	The efficacy of fVII-tPDT was assessed in vitro by crystal violet staining assay and in vivo by measuring tumor size in mice carrying murine or human breast cancer xenografts.	Gentian Violet	51-65	coagulation factor VII	Mus musculus	16-20
19168872-9	2009	Crystal violet assay has shown that transfection of Ishikawa cells with Pak1 siRNA led to a significant decrease of cellular viability (P < 0.05).	Gentian Violet	0-14	p21 (RAC1) activated kinase 1	Homo sapiens	72-76
21125852-3	2010	The limit of detection for crystal violet dye on the nanostructured substrates is estimated to reach ppb levels and the SERS enhancement factor is found to be two orders of magnitude higher than that from conventional de-alloy nanoporous films.	Gentian Violet	27-41	seryl-tRNA synthetase 2, mitochondrial	Homo sapiens	120-124
21090340-6	2010	The antitumor potential of DD3-ZD55-SATB1 to LNCaP was evaluated by the crystal violet dye method.	Gentian Violet	72-86	SATB homeobox 1	Homo sapiens	36-41
19679509-0	2009	Study on the interaction between methyl violet and bovine serum albumin by spectral analyses.	Gentian Violet	33-46	albumin	Homo sapiens	58-71
19679509-1	2009	In this article the interaction between methyl violet (MV) and bovine serum albumin (BSA) was studied with spectroscopy.	Gentian Violet	40-53	albumin	Homo sapiens	70-83
20574150-9	2010	METHODS: The antitumor effect of Ad sp E1A((Delta24)) E1B((Delta55)) IL-24 was assessed by MTT assay and crystal violet staining in a panel of tumor cells.	Gentian Violet	105-119	small nucleolar RNA, H/ACA box 73a	Mus musculus	54-57
20574150-9	2010	METHODS: The antitumor effect of Ad sp E1A((Delta24)) E1B((Delta55)) IL-24 was assessed by MTT assay and crystal violet staining in a panel of tumor cells.	Gentian Violet	105-119	interleukin 24	Mus musculus	69-74
18604470-5	2009	Crosslinking of FN significantly promotes osteoblast adhesion as measured by crystal violet staining, and enhances beta(1)-integrin clustering on the cell surface as visualized by immunofluorescence microscopy.	Gentian Violet	77-91	fibronectin 1	Homo sapiens	16-18
17999162-2	2008	MATERIALS AND METHODS: TNF-induced cytotoxicity was assessed in L929 fibrosarcoma cells by crystal violet assay.	Gentian Violet	91-105	tumor necrosis factor	Mus musculus	23-26
18941464-3	2008	3-(4,5-Dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) and crystal violet assays demonstrated that Cyr61 was essential for the proliferation of PCa cells.	Gentian Violet	71-85	cellular communication network factor 1	Homo sapiens	111-116
19309225-4	2009	In this study crystal violet method was used to study the effect of the ClC inhibitor, 5-nitro-2-(3-phenylpropylamino) benzoic acid, NPPB, on Hep-2 cell proliferation.	Gentian Violet	14-28	natriuretic peptide B	Homo sapiens	133-137
19080082-4	2008	The growth of Ad-mda-7/IL-24 in the MCF-7 cells was assayed by crystal violet staining and MTT method.	Gentian Violet	63-77	interleukin 24	Homo sapiens	17-22
19080082-4	2008	The growth of Ad-mda-7/IL-24 in the MCF-7 cells was assayed by crystal violet staining and MTT method.	Gentian Violet	63-77	interleukin 24	Homo sapiens	23-28
19080082-9	2008	Crystal violet staining and MTT method showed that Ad-mda-7/IL-24 dose and time-dependently inhibited the growth of the MCF-7 and MDA-MB-453 cells.	Gentian Violet	0-14	interleukin 24	Homo sapiens	54-59
19080082-9	2008	Crystal violet staining and MTT method showed that Ad-mda-7/IL-24 dose and time-dependently inhibited the growth of the MCF-7 and MDA-MB-453 cells.	Gentian Violet	0-14	interleukin 24	Homo sapiens	60-65
18172578-4	2008	The effect of natural and synthetic PPAR ligands on cell growth was determined by either hemocytometer counting or crystal violet assay.	Gentian Violet	115-129	peroxisome proliferator activated receptor alpha	Homo sapiens	36-40
16751249-2	2006	Freely diffusing Tb3+ -chelates of varying charge constituted a set of energy transfer donors to the acceptor, crystal violet, a noncompetitive antagonist of the nAChR.	Gentian Violet	111-125	cholinergic receptor nicotinic alpha 4 subunit	Homo sapiens	162-167
18188185-7	2008	The oncolytic activity of PPT-E1A-based viruses was studied using MTS, crystal violet and replication assays.	Gentian Violet	71-85	palmitoyl-protein thioesterase 1	Mus musculus	26-29
18259943-6	2008	Secondly, we use the specific tyrosine kinase inhibitors, Tyrphostins to examine HER-2 regulation by the crystal violet assay.	Gentian Violet	105-119	erb-b2 receptor tyrosine kinase 2	Homo sapiens	81-86
18061250-14	2008	Crystal violet staining revealed increased cell death with Ad-siRNA-Hec1.F5/3 in all tested cell lines.	Gentian Violet	0-14	NDC80 kinetochore complex component	Homo sapiens	68-72
18397859-4	2008	Crystal violet cell vitality assay was used to check the sensitivity to TRAIL-induced apoptosis.	Gentian Violet	0-14	TNF superfamily member 10	Homo sapiens	72-77
18503189-4	2008	Deletion of crp significantly increased the resistance of the E. coli strain to oxacillin, azithromycin, erythromycin and crystal violet.	Gentian Violet	122-136	catabolite gene activator protein	Escherichia coli	12-15
18275107-0	2008	Separation of crystal violet dyes and its application to pen ink analysis using CZE and MEKC methods.	Gentian Violet	14-28	proprotein convertase subtilisin/kexin type 1 inhibitor	Homo sapiens	57-60
16751249-3	2006	Energy transfer from a neutral Tb3+ -chelate to nAChR-bound crystal violet was reduced 95% relative to the energy transfer to free crystal violet.	Gentian Violet	60-74	cholinergic receptor nicotinic alpha 4 subunit	Homo sapiens	48-53
16751249-3	2006	Energy transfer from a neutral Tb3+ -chelate to nAChR-bound crystal violet was reduced 95% relative to the energy transfer to free crystal violet.	Gentian Violet	131-145	cholinergic receptor nicotinic alpha 4 subunit	Homo sapiens	48-53
16751249-4	2006	This result indicated that crystal violet was strongly shielded from solvent when bound to the nAChR.	Gentian Violet	27-41	cholinergic receptor nicotinic alpha 4 subunit	Homo sapiens	95-100
15928454-0	2005	Evaluation of crystal violet blood agar for primary isolation and identification of group A-beta haemolytic streptococci.	Gentian Violet	14-28	amyloid beta precursor protein	Homo sapiens	90-96
15890093-6	2005	Killing effects of Ad.TERT-TRAIL and Ad.TERT on 3 tumor cell lines, SW620, BEL-7404 and Bcap-37, and a normal cell line NHLF were detected by crystal violet dye method or MTT assay.	Gentian Violet	142-156	telomerase reverse transcriptase	Homo sapiens	22-26
15890093-6	2005	Killing effects of Ad.TERT-TRAIL and Ad.TERT on 3 tumor cell lines, SW620, BEL-7404 and Bcap-37, and a normal cell line NHLF were detected by crystal violet dye method or MTT assay.	Gentian Violet	142-156	telomerase reverse transcriptase	Homo sapiens	40-44
16686729-2	2006	MATERIALS AND METHODS: Inhibition of Bcl-2 and Bcl-xL expression by the bispecific ASO was evaluated using real-time reverse transcription-polymerase chain reaction and Western blotting, while growth inhibition and induction of apoptosis were analysed by a crystal violet assay, flow cytometry and Western blotting of apoptosis-relevant proteins.	Gentian Violet	257-271	BCL2 apoptosis regulator	Homo sapiens	37-42
16003725-4	2006	Crystal violet staining assays were performed to reveal the sensitivity against TRAIL.	Gentian Violet	0-14	tumor necrosis factor (ligand) superfamily, member 10	Mus musculus	80-85
16544494-6	2005	Furthermore, the measurements of the SERS spectrum of crystal violet indicate that such substrate has the features of satisfactory reproducibility, long term stability and high SERS activity.	Gentian Violet	54-68	seryl-tRNA synthetase 2, mitochondrial	Homo sapiens	37-41
16544494-6	2005	Furthermore, the measurements of the SERS spectrum of crystal violet indicate that such substrate has the features of satisfactory reproducibility, long term stability and high SERS activity.	Gentian Violet	54-68	seryl-tRNA synthetase 2, mitochondrial	Homo sapiens	177-181
16557019-6	2005	Crystal violet staining 50% CPE inhibition antiviral assay of human IFN using Getah virus was studied.	Gentian Violet	0-14	carboxypeptidase E	Homo sapiens	28-31
16557019-6	2005	Crystal violet staining 50% CPE inhibition antiviral assay of human IFN using Getah virus was studied.	Gentian Violet	0-14	interferon alpha 1	Homo sapiens	68-71
16143959-1	2005	Resonance Rayleigh scattering (RRS) spectra resulting from interaction between chondroitin sulfate A (CSA) and crystal violet (CV) have been investigated and applied to the determination of CSA.	Gentian Violet	111-125	ERCC excision repair 8, CSA ubiquitin ligase complex subunit	Homo sapiens	190-193
16143959-1	2005	Resonance Rayleigh scattering (RRS) spectra resulting from interaction between chondroitin sulfate A (CSA) and crystal violet (CV) have been investigated and applied to the determination of CSA.	Gentian Violet	127-129	ERCC excision repair 8, CSA ubiquitin ligase complex subunit	Homo sapiens	190-193
15290100-2	2005	METHODS: We investigated the cytotoxicity of TRAIL alone and the synergistic antitumor effects of TRAIL in combination with chemotherapeutic agents in A549 cells by crystal violet staining and FACS in vitro.	Gentian Violet	165-179	tumor necrosis factor (ligand) superfamily, member 10	Mus musculus	98-103
15596224-13	2004	Crystal violet staining and Matrigel invasion revealed a higher invasion index following IL-1beta challenge and a low invasion index following TGF-beta1 challenge.	Gentian Violet	0-14	interleukin 1 beta	Homo sapiens	89-97