PMID-sentid Pub_year Sent_text compound_name comp_offset prot_official_name organism prot_offset 15562002-6 2004 The interaction of distamycin, a minor groove binder with high affinity for homopolymeric oligo(dA).oligo(dT) tracts, abolishes preferential binding of the C-terminal domain of histone H1 and protamine to the SAR, suggesting the involvement of the DNA minor groove in the interaction. stallimycin 19-29 sarcosine dehydrogenase Homo sapiens 209-212 12771220-4 2003 These results demonstrate the utility of distamycin as a probe of G4 DNA-protein interactions and show that there are (at least) two distinct modes of protein-G4 DNA recognition which can be distinguished by sensitivity to distamycin. stallimycin 223-233 chromosome 6 open reading frame 47 Homo sapiens 151-161 15220334-4 2004 Treatment with a DNA-intercalating drug distamycin A (DST) at 75 microg/ml resulted in a size reduction of the enhanced S/MAR domain at the neocentromere of two-thirds to 1.2 Mb, and that of the CENP-A-binding domain of 40%, from 330 to 196 kb, with no significant shift in the position of the latter domain. stallimycin 40-52 centromere protein A Homo sapiens 195-201 15220334-4 2004 Treatment with a DNA-intercalating drug distamycin A (DST) at 75 microg/ml resulted in a size reduction of the enhanced S/MAR domain at the neocentromere of two-thirds to 1.2 Mb, and that of the CENP-A-binding domain of 40%, from 330 to 196 kb, with no significant shift in the position of the latter domain. stallimycin 54-57 centromere protein A Homo sapiens 195-201 11880377-0 2002 Human fragile site FRA16B DNA excludes nucleosomes in the presence of distamycin. stallimycin 70-80 fragile site, distamycin A type, rare, fra(16)(q22.1) Homo sapiens 19-25 12027447-8 2002 Taken together, the synergistic induction of the genes may be explained not only by opening of condensed chromatin by distamycin A but also by increase in the binding of 5-bromouracil-containing S/MAR sequences to the nuclear scaffolds. stallimycin 118-130 interferon regulatory factor 1 Homo sapiens 197-200 12023812-6 2002 Related biochemical studies on the effect of polyamides on DNA gyrase activity in vitro show that the C7 dimers most effectively inhibit the enzyme activity compared with the monomers and the natural reference minor groove binder distamycin. stallimycin 230-240 DNA topoisomerase II alpha Homo sapiens 59-69 11880377-4 2002 The FRA16B DNA fragments strongly exclude nucleosome assembly only in the presence of distamycin, and increasing the number of 33-bp repeats increases the effect of distamycin in the destabilization of the nucleosome formation, suggesting a common mechanism for the formation of fragile sites. stallimycin 86-96 fragile site, distamycin A type, rare, fra(16)(q22.1) Homo sapiens 4-10 11870918-0 2002 Distamycin A affects the stability of NF-kappaB p50-DNA complexes in a sequence-dependent manner. stallimycin 0-12 nuclear factor kappa B subunit 1 Homo sapiens 38-51 11870918-1 2002 The effect of two different DNA minor groove binding molecules, Hoechst 33258 and distamycin A, on the binding kinetics of NF-kappaB p50 to three different specific DNA sequences was studied at various salt concentrations. stallimycin 82-94 nuclear factor kappa B subunit 1 Homo sapiens 123-136 11870918-2 2002 Distamycin A was shown to significantly increase the dissociation rate constant of p50 from the sequences PRDII (5"-GGGAAATTCC-3") and Ig-kappa B (5"-GGGACTTTCC-3") but had a negligible effect on the dissociation from the palindromic target-kappaB binding site (5"-GGGAATTCCC-3"). stallimycin 0-12 nuclear factor kappa B subunit 1 Homo sapiens 83-86 11601987-3 2001 Minor groove binding ligands, such as distamycin, netropsin, and GLX, an indole-linked dimer of netropsin, can effectively disrupt the UL9-DNA complex only when their DNA binding sites are coincident with the right side of the DNA binding site of the protein and overlap with the protein binding site by two (TT) base pairs. stallimycin 38-48 DNA replication origin-binding helicase Human alphaherpesvirus 1 135-138 10871376-8 2000 The results demonstrate that BLM and WRN proteins exhibit similar sensitivity profiles to these DNA-binding ligands and are most potently inhibited by the structurally related minor groove binders distamycin A and netropsin (K(i) </=1 microM). stallimycin 197-209 BLM RecQ like helicase Homo sapiens 29-32 11308031-5 2001 The DNA binding drugs mithramycin and distamycin bind to one of these regions as determined by DNase I protection assay. stallimycin 38-48 deoxyribonuclease I Mus musculus 95-102 11425313-2 2001 We have characterized the association of the HMGA protein, five different HMGB proteins, and the structure-specific recognition protein 1 (SSRP1) with maize chromatin by extraction experiments using NaCl, ethidium bromide, spermine, and distamycin A. stallimycin 237-249 LOC100856902 Zea mays 139-144 10871376-8 2000 The results demonstrate that BLM and WRN proteins exhibit similar sensitivity profiles to these DNA-binding ligands and are most potently inhibited by the structurally related minor groove binders distamycin A and netropsin (K(i) </=1 microM). stallimycin 197-209 WRN RecQ like helicase Homo sapiens 37-40 10204311-6 1999 Recently, it was shown that two expanded minisatellite sequences are also involved in both progressive myoclonus epilepsy type 1 and distamycin A-sensitive fragile site, FRA16B. stallimycin 133-145 fragile site, distamycin A type, rare, fra(16)(q22.1) Homo sapiens 170-176 10815772-2 2000 Sulfonated distamycin (Suradista) derivatives exhibit anti-HIV-1 activity by inhibiting the binding of the viral envelope glycoprotein gp120 to its receptor (CD4). stallimycin 11-21 inter-alpha-trypsin inhibitor heavy chain 4 Homo sapiens 135-140 10815772-2 2000 Sulfonated distamycin (Suradista) derivatives exhibit anti-HIV-1 activity by inhibiting the binding of the viral envelope glycoprotein gp120 to its receptor (CD4). stallimycin 11-21 CD4 molecule Homo sapiens 158-161 10524202-2 1999 Distamycin A inhibits transcription both in vitro and in vivo and can displace from DNA the transcription activator TATA binding protein promoter binding factor (TPBF). stallimycin 0-12 TATA-box binding protein Homo sapiens 116-136 10082546-8 1999 Transfection with a plasmid carrying scaffold attachment regions as well as incubation with distamycin led to the derepression of the IFN-beta promoter stably integrated into chromatin. stallimycin 92-102 interferon beta 1, fibroblast Mus musculus 134-142 10984839-1 2000 Previously, the allelic expansion of a 33-bp AT-rich minisatellite repeat has been reported to cause FRA16B, a distamycin A-inducible fragile site. stallimycin 111-123 fragile site, distamycin A type, rare, fra(16)(q22.1) Homo sapiens 101-107 9698360-1 1998 DNA binding modes of distamycin (DST) were investigated via comparative binding studies with oligomeric duplexes of the form d(GCG-X-GCG).d(CGC-Y-CGC), where Y is complementary to X and X = 4- or 5-base binding site. stallimycin 21-31 glucagon Homo sapiens 127-130 9840289-0 1998 Characterization of the effects of two polysulfonated distamycin A derivatives, PNU145156E and PNU153429, on HIV type 1 Tat protein. stallimycin 54-66 tyrosine aminotransferase Homo sapiens 120-123 9840289-1 1998 We examined whether two sulfonated distamycin A derivatives, PNU145156E and PNU153529, inhibit the trans-activating and angiogenic effects of HIV-1 Tat protein. stallimycin 35-47 Tat Human immunodeficiency virus 1 148-151 9729384-3 1998 The molecular structures of some of these regions have now been determined, most notably the folate-sensitive fragile sites and FRA16B-a distamycin A-sensitive fragile site. stallimycin 137-149 fragile site, distamycin A type, rare, fra(16)(q22.1) Homo sapiens 128-134 9698360-1 1998 DNA binding modes of distamycin (DST) were investigated via comparative binding studies with oligomeric duplexes of the form d(GCG-X-GCG).d(CGC-Y-CGC), where Y is complementary to X and X = 4- or 5-base binding site. stallimycin 21-31 glucagon Homo sapiens 133-136 9660961-4 1998 Here, we report that bromodeoxyuridine-inducible, distamycin A-insensitive fragile site FRA10B is composed of expanded approximately 42 bp repeats. stallimycin 50-62 fragile site, BrdU type, rare, fra(10)(q25.2) Homo sapiens 88-94 9632350-0 1998 Inhibition of in vitro and in vivo HIV replication by a distamycin analogue that interferes with chemokine receptor function: a candidate for chemotherapeutic and microbicidal application. stallimycin 56-66 C-X-C motif chemokine receptor 4 Homo sapiens 97-115 9311598-1 1997 The cytotoxic activities of 2 novel distamycin-A derivatives, FCE 24517 and FCE 25450A, alone and in combination with tumor-necrosis factor-alpha (TNF), were studied. stallimycin 36-48 tumor necrosis factor Homo sapiens 147-150 9430660-8 1998 Instead, we found that the GST-Cdc6 can compete with distamycin A for binding to the DNA molecule. stallimycin 53-65 AAA family ATPase CDC6 Saccharomyces cerevisiae S288C 31-35 9430660-9 1998 As distamycin A is a specific reagent that binds noncovalently to DNA at (A + T)-rich tracks, the stimulation of Abf1 DNA binding activity may be mediated by the Cdc6/DNA interaction. stallimycin 3-15 DNA-binding protein ABF1 Saccharomyces cerevisiae S288C 113-117 9430660-9 1998 As distamycin A is a specific reagent that binds noncovalently to DNA at (A + T)-rich tracks, the stimulation of Abf1 DNA binding activity may be mediated by the Cdc6/DNA interaction. stallimycin 3-15 AAA family ATPase CDC6 Saccharomyces cerevisiae S288C 162-166 9660961-3 1998 Distamycin A or bromodeoxyuridine-inducible fragile site FRA16B is an expanded AT-rich approximately 33 bp repeat; however, the relationship between normal and fragile site alleles is not known. stallimycin 0-12 fragile site, distamycin A type, rare, fra(16)(q22.1) Homo sapiens 57-63 9460496-0 1998 A distamycin A-inducible fragile site, FRA8E, located in the region of the hereditary multiple exostoses gene, is not involved in HPV16 DNA integration and amplification. stallimycin 2-14 fragile site, distamycin A type, rare, fra(8)(q24.1) Homo sapiens 39-44 9460496-4 1998 A distamycin A-inducible fragile site, FRA8E, is mapped to 8q24.1 in which various loci implicated in genomic instability are located. stallimycin 2-14 fragile site, distamycin A type, rare, fra(8)(q24.1) Homo sapiens 39-44 9311598-10 1997 These findings suggest that, beyond their cytotoxic effects as single agents, the distamycin derivatives increase the sensitivity of cells to TNF. stallimycin 82-92 tumor necrosis factor Homo sapiens 142-145 9031761-0 1997 Anti-insulin-like growth factor-I activity of a novel polysulphonated distamycin A derivative in human lung cancer cell lines. stallimycin 70-82 insulin like growth factor 1 Homo sapiens 5-33 9096302-2 1997 The most active of these drugs, MGT-6a, was three orders of magnitude more effective than distamycin and inhibited complexes between E2F1 and the dihydrofolate reductase promoter by 50% at 0.00085 microM. stallimycin 90-100 E2F transcription factor 1 Homo sapiens 133-137 9089632-6 1997 Using the mobility shift assay distamycin A selectively inhibited binding of two important transcription factors, SRF and MEF2, to their respective A/T-rich elements. stallimycin 31-43 myocyte enhancer factor 2C Mus musculus 122-126 9089632-10 1997 Additionally, SRF and MEF2 dependent promoters were selectively down regulated by distamycin A. stallimycin 82-94 myocyte enhancer factor 2C Mus musculus 22-26 9031761-2 1997 The purpose of this study was to investigate the antiproliferative effect and the modulation of the mitogenic insulin-like growth factor-I (IGF-I) system by FCE 26644 and FCE 27784, two polyanionic sulphonated distamycin A derivative compounds, on two human non-small cell lung cancer (N-SCLC) cell lines. stallimycin 210-222 insulin like growth factor 1 Homo sapiens 110-138 9031761-2 1997 The purpose of this study was to investigate the antiproliferative effect and the modulation of the mitogenic insulin-like growth factor-I (IGF-I) system by FCE 26644 and FCE 27784, two polyanionic sulphonated distamycin A derivative compounds, on two human non-small cell lung cancer (N-SCLC) cell lines. stallimycin 210-222 insulin like growth factor 1 Homo sapiens 140-145 9039263-4 1997 To clarify this relationship, the distamycin A-sensitive fragile site FRA16B was isolated by positional cloning and found to be an expanded 33 bp AT-rich minisatellite repeat, p(ATATA TTATATATTATATCTAATAATATATC/ATA)n (consistent with DNA sequence binding preferences of chemicals that induce its cytogenetic expression). stallimycin 34-46 fragile site, distamycin A type, rare, fra(16)(q22.1) Homo sapiens 70-76 8798634-8 1996 An AT minor groove-binding drug, distamycin A, disrupted the TBP.TFIIA.DNA complex and restored the EGR1.DNA complex. stallimycin 33-45 TATA-box binding protein Homo sapiens 61-64 9016563-0 1997 Distamycin prolongs E-selectin expression by interacting with a specific NF-kappaB-HMG-I(Y) binding site in the promoter. stallimycin 0-10 selectin E Homo sapiens 20-30 9016563-0 1997 Distamycin prolongs E-selectin expression by interacting with a specific NF-kappaB-HMG-I(Y) binding site in the promoter. stallimycin 0-10 high mobility group AT-hook 1 Homo sapiens 83-90 9016563-4 1997 Distamycin is an antibiotic that also binds A/T-rich DNA and inhibits HMG-I(Y) DNA binding. stallimycin 0-10 high mobility group AT-hook 1 Homo sapiens 70-77 9016563-5 1997 To study the role of HMG-I(Y) in E-selectin expression, we have examined the effect of distamycin on the cytokine-induced E-selectin expression cycle. stallimycin 87-97 selectin E Homo sapiens 122-132 9016563-6 1997 We found that distamycin prolonged E-selectin expression, both by sustaining mRNA transcription and by extending the transcript"s half-life. stallimycin 14-24 selectin E Homo sapiens 35-45 9016563-7 1997 The distamycin effect on transcription was mediated through one of the three NF-kappaB-HMG-I(Y) binding sites (NF-kappaBII) within the promoter. stallimycin 4-14 high mobility group AT-hook 1 Homo sapiens 87-94 8798634-8 1996 An AT minor groove-binding drug, distamycin A, disrupted the TBP.TFIIA.DNA complex and restored the EGR1.DNA complex. stallimycin 33-45 early growth response 1 Homo sapiens 100-104 8573565-1 1996 We have used DNase I footprinting and gel shift assays to characterize the interaction of DNA binding drugs mithramycin, distamycin, and berenil with an intermolecular triplex formed by the human c-Ki-ras promoter. stallimycin 121-131 KRAS proto-oncogene, GTPase Homo sapiens 196-204 8573565-7 1996 Five prominent distamycin binding sites are noted within the c-Ki-ras promoter including the triplex-forming site as well as A-T-rich regions upstream and downstream of the triplex site. stallimycin 15-25 choline kinase alpha Homo sapiens 61-65 7784168-0 1995 Distamycin A and tallimustine inhibit TBP binding and basal in vitro transcription. stallimycin 0-12 TATA-box binding protein Homo sapiens 38-41 7577702-0 1995 Alteration of the expression of human estrogen receptor gene by distamycin. stallimycin 64-74 estrogen receptor 1 Homo sapiens 38-55 7577702-1 1995 The effects of distamycin on the expression of the estrogen receptor gene were determined in the MCF7 human breast cancer cell line. stallimycin 15-25 estrogen receptor 1 Homo sapiens 51-68 7577702-3 1995 After ex vivo distamycin treatment of the cells the expression of the canonical ER mRNA isoform of 6.3 kb is strongly inhibited, without appreciable alteration of the accumulation of 5" upstream ER mRNA isoforms. stallimycin 14-24 estrogen receptor 1 Homo sapiens 80-82 7577702-4 1995 These results suggest that distamycin alters the transcriptional activity of the ER gene causing a change in the ratio between the canonical transcript and other isoforms containing 5" upstream regions. stallimycin 27-37 estrogen receptor 1 Homo sapiens 81-83 7516181-3 1994 Our results demonstrate that reversible MGBs (DAPI, distamycin A, Hoechst 33258, and netropsin) are effective inhibitors of the formation of DNA/TBP complex and that distamycin A is the most potent (0.16 microM inhibits TBP complex formation by 50%). stallimycin 166-178 TATA-box binding protein Homo sapiens 145-148 7880838-8 1995 Competitive electrophoretic mobility shift assays were used to show that berenil, distamycin, and mithramycin, all of which bind in the minor groove, compete with MBP-1 for binding to the MPB-1 binding site. stallimycin 82-92 mannose binding lectin 2 Homo sapiens 163-168 7880838-8 1995 Competitive electrophoretic mobility shift assays were used to show that berenil, distamycin, and mithramycin, all of which bind in the minor groove, compete with MBP-1 for binding to the MPB-1 binding site. stallimycin 82-92 enolase 1 Homo sapiens 188-193 7699207-6 1994 Distamycin inhibits indeed PCR mediated amplification of AT-rich regions of the human estrogen receptor gene, displaying no inhibitory effects on PCR-mediated amplification of GC-rich sequences of Ha-ras oncogene. stallimycin 0-10 estrogen receptor 1 Homo sapiens 86-103 7516181-3 1994 Our results demonstrate that reversible MGBs (DAPI, distamycin A, Hoechst 33258, and netropsin) are effective inhibitors of the formation of DNA/TBP complex and that distamycin A is the most potent (0.16 microM inhibits TBP complex formation by 50%). stallimycin 52-64 TATA-box binding protein Homo sapiens 145-148 8041627-6 1994 The minor groove specific drugs chromomycin A3, distamycin A and actinomycin D competed against UBF for enhancer binding, suggesting that UBF, like other HMG-box proteins, probably interacts with the minor groove. stallimycin 48-60 upstream binding transcription factor L homeolog Xenopus laevis 96-99 8041627-6 1994 The minor groove specific drugs chromomycin A3, distamycin A and actinomycin D competed against UBF for enhancer binding, suggesting that UBF, like other HMG-box proteins, probably interacts with the minor groove. stallimycin 48-60 upstream binding transcription factor L homeolog Xenopus laevis 138-141 7516181-3 1994 Our results demonstrate that reversible MGBs (DAPI, distamycin A, Hoechst 33258, and netropsin) are effective inhibitors of the formation of DNA/TBP complex and that distamycin A is the most potent (0.16 microM inhibits TBP complex formation by 50%). stallimycin 166-178 TATA-box binding protein Homo sapiens 220-223 7516181-4 1994 CC-1065, a drug that covalently binds to DNA in the minor groove, is even more active than distamycin A (0.00085 microM inhibits TBP complex formation by 50%). stallimycin 91-103 TATA-box binding protein Homo sapiens 129-132 7516181-7 1994 In the presence of TFIIA, a factor that enhances TBP association with DNA, greater drug concentrations (distamycin A and CC-1065, respectively) are needed to disrupt a preformed complex of DNA/TBP/TFIIA. stallimycin 104-116 general transcription factor IIA subunit 1 Homo sapiens 19-24 7516181-7 1994 In the presence of TFIIA, a factor that enhances TBP association with DNA, greater drug concentrations (distamycin A and CC-1065, respectively) are needed to disrupt a preformed complex of DNA/TBP/TFIIA. stallimycin 104-116 TATA-box binding protein Homo sapiens 49-52 7516181-7 1994 In the presence of TFIIA, a factor that enhances TBP association with DNA, greater drug concentrations (distamycin A and CC-1065, respectively) are needed to disrupt a preformed complex of DNA/TBP/TFIIA. stallimycin 104-116 TATA-box binding protein Homo sapiens 193-196 7516181-7 1994 In the presence of TFIIA, a factor that enhances TBP association with DNA, greater drug concentrations (distamycin A and CC-1065, respectively) are needed to disrupt a preformed complex of DNA/TBP/TFIIA. stallimycin 104-116 general transcription factor IIA subunit 1 Homo sapiens 197-202 7694277-3 1993 No 1:1 and 3:1 complexes were seen, implying a preferential dimeric binding mode of Dm to oligo-12. stallimycin 84-86 NBL1, DAN family BMP antagonist Homo sapiens 0-12 7508230-0 1994 New sulfonated distamycin A derivatives with bFGF complexing activity. stallimycin 15-27 fibroblast growth factor 2 Homo sapiens 45-49 7508230-4 1994 A series of sulfonated distamycin A derivatives have been synthesized with the objective of identifying novel compounds able to complex basic fibroblastic growth factor (bFGF) and other factors involved in tumour angiogenesis, and consequently to block the angiogenic process. stallimycin 23-35 fibroblast growth factor 2 Homo sapiens 170-174 8471077-1 1993 We have measured the effects of eight distamycin and two anthracycline derivatives on polynucleotide joining and self-adenylating activities of human DNA ligase I and rat DNA ligases I and III. stallimycin 38-48 DNA ligase 1 Rattus norvegicus 150-162 8471077-1 1993 We have measured the effects of eight distamycin and two anthracycline derivatives on polynucleotide joining and self-adenylating activities of human DNA ligase I and rat DNA ligases I and III. stallimycin 38-48 DNA ligase 1 Rattus norvegicus 171-192 1447220-2 1992 The path of cooperative polymerization of recA protein was deduced by its ability to cause quantitative displacement of distamycin from the narrow groove of duplex DNA. stallimycin 120-130 RAD51 recombinase Homo sapiens 42-46 1447220-6 1992 Intriguingly, distamycin interfered with the production of coaggregates between nucleoprotein filaments of recA protein-M13 ssDNA and naked linear M13 duplex DNA, but not with linear phi X174 duplex DNA. stallimycin 14-24 RAD51 recombinase Homo sapiens 107-111 1329842-2 1992 We have found that three minor groove-binding antibiotics, distamycin A, netropsin and sibiromycin, compete effectively with the cro for binding to the operator OR3. stallimycin 59-71 cro Escherichia virus Lambda 129-132 1487398-1 1992 FCE 24517, a derivative of distamycin A, exhibits an unusual antitumor profile in experimental models. stallimycin 27-39 ferrochelatase Homo sapiens 0-3 1385053-3 1992 Gel mobility shift assays show that HMG-I forms specific complexes with satellite DNA and that the formation of these complexes is competed for by both Hoechst and distamycin. stallimycin 164-174 high mobility group AT-hook 1 Mus musculus 36-41 1329842-5 1992 Both the CD spectral profiles and the results of the gel retardation experiments indicate that distamycin A and netropsin can displace cro repressor from the operator OR3. stallimycin 95-107 cro Escherichia virus Lambda 135-138 1329842-8 1992 The CD spectral profile of the cro-OR3 mixture in the presence of distamycin A can be represented as a sum of the CD spectrum of the repressor-operator complex and spectrum of distamycin-DNA complex at the appropriate molar ratio of the bound antibiotic to the operator DNA (r). stallimycin 66-78 cro Escherichia virus Lambda 31-34 1329842-8 1992 The CD spectral profile of the cro-OR3 mixture in the presence of distamycin A can be represented as a sum of the CD spectrum of the repressor-operator complex and spectrum of distamycin-DNA complex at the appropriate molar ratio of the bound antibiotic to the operator DNA (r). stallimycin 66-76 cro Escherichia virus Lambda 31-34 1329842-10 1992 This suggests that simultaneous binding of cro repressor and distamycin A to the same DNA oligomer is not possible and that distamycin A and netropsin can be used to determine the equilibrium affinity constant of cro repressor to the synthetic operator from competition-type experiments. stallimycin 61-73 cro Escherichia virus Lambda 213-216 1329842-10 1992 This suggests that simultaneous binding of cro repressor and distamycin A to the same DNA oligomer is not possible and that distamycin A and netropsin can be used to determine the equilibrium affinity constant of cro repressor to the synthetic operator from competition-type experiments. stallimycin 124-136 cro Escherichia virus Lambda 213-216 2714776-7 1989 In addition, FRA17A, classified as a distamycin A-inducible fragile site, was found with a frequency of 1 in 206. stallimycin 37-49 fragile site, distamycin A type, rare, fra(17)(p12) Homo sapiens 13-19 1764367-0 1991 Biological profile of FCE 24517, a novel benzoyl mustard analogue of distamycin A. stallimycin 69-81 ferrochelatase Homo sapiens 22-25 1864598-1 1991 Expression of distamycin A-inducible rare fragile sites by AT-specific DNA-ligands was examined in lymphoblastoid cell lines derived from heterozygous carriers for the fra(8)(q24), fra(16)(p12), and fra(16)(q22) sites. stallimycin 14-26 DNA polymerase epsilon 4, accessory subunit Homo sapiens 189-192 1997000-0 1991 Distamycin inhibits the binding of a nuclear factor to the -278/-256 upstream sequence of the human HLA-DR alpha gene. stallimycin 0-10 major histocompatibility complex, class II, DR alpha Homo sapiens 100-112 1997000-1 1991 In this study we analyse the effects of the anti-tumor compound distamycin on the binding of nuclear factor(s) to a synthetic oligonucleotide (GTATA/IFN-gamma) mimicking a putative regulatory region of the human HLA-DR alpha gene. stallimycin 64-74 interferon gamma Homo sapiens 149-158 1997000-1 1991 In this study we analyse the effects of the anti-tumor compound distamycin on the binding of nuclear factor(s) to a synthetic oligonucleotide (GTATA/IFN-gamma) mimicking a putative regulatory region of the human HLA-DR alpha gene. stallimycin 64-74 major histocompatibility complex, class II, DR alpha Homo sapiens 212-224 2556260-8 1989 Distamycin, which is known to interact highly selectively with runs of A.T base pairs, abolishes the specific interaction of SARs with topoisomerase II, and the homopolymer oligo(dA).oligo(dT) is, above a critical length of 240 bp, a highly specific artificial SAR. stallimycin 0-10 sarcosine dehydrogenase Homo sapiens 125-128 1311255-7 1992 Treatment of cells with distamycin selectively enhances cleavage at nucleosome linker sites of the SAR and satellite regions, suggesting that AT-rich sequences flanking cleavage sites may be involved in determining topoisomerase II activity in the cell. stallimycin 24-34 Topoisomerase 2 Drosophila melanogaster 215-231 1377571-4 1992 A number of sulphonated derivatives of distamycin A were found active in inhibiting the binding of bFGF and PDGF beta on Swiss 3T3 cells with ID50 values ranging between 142-587 microM for bFGF and 28-79 microM for PDGF beta. stallimycin 39-51 fibroblast growth factor 2 Mus musculus 99-103 1377571-4 1992 A number of sulphonated derivatives of distamycin A were found active in inhibiting the binding of bFGF and PDGF beta on Swiss 3T3 cells with ID50 values ranging between 142-587 microM for bFGF and 28-79 microM for PDGF beta. stallimycin 39-51 platelet derived growth factor, B polypeptide Mus musculus 108-117 1377571-4 1992 A number of sulphonated derivatives of distamycin A were found active in inhibiting the binding of bFGF and PDGF beta on Swiss 3T3 cells with ID50 values ranging between 142-587 microM for bFGF and 28-79 microM for PDGF beta. stallimycin 39-51 fibroblast growth factor 2 Mus musculus 189-193 1377571-4 1992 A number of sulphonated derivatives of distamycin A were found active in inhibiting the binding of bFGF and PDGF beta on Swiss 3T3 cells with ID50 values ranging between 142-587 microM for bFGF and 28-79 microM for PDGF beta. stallimycin 39-51 platelet derived growth factor, B polypeptide Mus musculus 215-224 3165691-1 1988 Five rare distamycin A-inducible fragile sites have been identified on human chromosomes: fra(8)(q24.1), fra(11)(p15.1), fra(16)(p12.1), fra(16)(q22), and fra(17)(p12). stallimycin 10-22 cyclin dependent kinase inhibitor 2B Homo sapiens 113-116 3169734-0 1988 A new rare distamycin A-inducible fragile site, fra(11) (p15.1), found in two acute nonlymphocytic leukemia (ANLL) patients with t(7;11)(p15-p13;p15). stallimycin 11-23 cyclin dependent kinase inhibitor 2B Homo sapiens 57-60 3169734-0 1988 A new rare distamycin A-inducible fragile site, fra(11) (p15.1), found in two acute nonlymphocytic leukemia (ANLL) patients with t(7;11)(p15-p13;p15). stallimycin 11-23 cyclin dependent kinase inhibitor 2B Homo sapiens 137-140 3169734-0 1988 A new rare distamycin A-inducible fragile site, fra(11) (p15.1), found in two acute nonlymphocytic leukemia (ANLL) patients with t(7;11)(p15-p13;p15). stallimycin 11-23 H3 histone pseudogene 6 Homo sapiens 141-144 3169734-0 1988 A new rare distamycin A-inducible fragile site, fra(11) (p15.1), found in two acute nonlymphocytic leukemia (ANLL) patients with t(7;11)(p15-p13;p15). stallimycin 11-23 cyclin dependent kinase inhibitor 2B Homo sapiens 137-140 3169734-5 1988 From these results, fra(11)(p15.1) can now be classified as a rare distamycin A-inducible fragile site. stallimycin 67-79 cyclin dependent kinase inhibitor 2B Homo sapiens 28-31 3165691-1 1988 Five rare distamycin A-inducible fragile sites have been identified on human chromosomes: fra(8)(q24.1), fra(11)(p15.1), fra(16)(p12.1), fra(16)(q22), and fra(17)(p12). stallimycin 10-22 DNA polymerase epsilon 4, accessory subunit Homo sapiens 129-132 3165691-1 1988 Five rare distamycin A-inducible fragile sites have been identified on human chromosomes: fra(8)(q24.1), fra(11)(p15.1), fra(16)(p12.1), fra(16)(q22), and fra(17)(p12). stallimycin 10-22 DNA polymerase epsilon 4, accessory subunit Homo sapiens 163-166 3817162-2 1987 Interaction of two synthetic analogs of distamycin (Dst), PPA and PAP, containing a saturated beta-alanine moiety replacing one N-methylpyrrole ring, with different polynucleotides and natural DNAs were studied using UV and CD spectroscopy. stallimycin 40-50 regenerating family member 3 alpha Homo sapiens 66-69 2840956-4 1988 The analogue, mPD derivative, has the requisite charged end groups and a number of potential hydrogen-bonding loci equal to those of distamycin. stallimycin 133-143 mevalonate (diphospho) decarboxylase Mus musculus 14-17 6273824-1 1981 The endonucleolytic action of the EcoRI restriction enzyme on the double-stranded oligonucleotide d(GGAATTCC) and the supercoiled plasmid DNA pBR 233 is inhibited by actinomycin D, ethidium bromide, proflavin, distamycin A and netropsin. stallimycin 210-222 translocator protein Homo sapiens 142-145 6198907-6 1984 Distamycin A, netropsin, and Hoechst 33258 induced high levels of expression of fra(16)(q22) and fra(17)(p12) but did not enhance expression of fra(10)(q25). stallimycin 0-12 DNA polymerase epsilon 4, accessory subunit Homo sapiens 105-108 4332843-0 1970 The inhibitory activity of distamycin A on X14, H-1 and polyoma viruses multiplication. stallimycin 27-39 H1.5 linker histone, cluster member Homo sapiens 43-51 7197598-1 1981 Pretreatment of PHA-stimulated lymphocyte cultures from normal males with 100 micrograms/ml Distamycin A for the final 24 h of incubation led to a striking decondensation of the heterochromatic portion of the long arm of the Y chromosome. stallimycin 92-104 lamin B receptor Homo sapiens 16-19 27186601-1 2016 Minor groove binding distamycin like moieties were conjugated with core salens and the corresponding Fe(iii) and Co(ii) complexes were synthesized. stallimycin 21-31 mitochondrially encoded cytochrome c oxidase II Homo sapiens 113-119 25694263-0 2015 Probing the interaction of distamycin A with S100beta: the "unexpected" ability of S100beta to bind to DNA-binding ligands. stallimycin 27-39 S100 calcium binding protein B Homo sapiens 45-53 25694263-0 2015 Probing the interaction of distamycin A with S100beta: the "unexpected" ability of S100beta to bind to DNA-binding ligands. stallimycin 27-39 S100 calcium binding protein B Homo sapiens 83-91 25694263-4 2015 Here, we show that distamycin A binds S100beta, a protein involved in the regulation of several cellular processes. stallimycin 19-31 S100 calcium binding protein B Homo sapiens 38-46 25694263-5 2015 The reported affinity of distamycin A for the calcium(II)-loaded S100beta reinforces the idea that some biological activities of the DNA-minor-groove-binding ligands arise from the binding to cellular proteins. stallimycin 25-37 S100 calcium binding protein B Homo sapiens 65-73 20395035-1 2010 Distamycin A (Dst) is an antibiotic which binds to the minor groove of double-stranded DNA at A/T-rich regions. stallimycin 0-12 dystonin Homo sapiens 14-17 21814787-7 2012 The optimal interaction of distamycin A with DNA may account for the down-regulation of both dihydrofolate reductase (DHFR) and thymidylate synthase (TS) and the up-regulation of spermidine/spermine N1-acetyltransferase (SSAT) caused by this compound. stallimycin 27-39 dihydrofolate reductase Homo sapiens 93-116 21814787-7 2012 The optimal interaction of distamycin A with DNA may account for the down-regulation of both dihydrofolate reductase (DHFR) and thymidylate synthase (TS) and the up-regulation of spermidine/spermine N1-acetyltransferase (SSAT) caused by this compound. stallimycin 27-39 dihydrofolate reductase Homo sapiens 118-122 21814787-7 2012 The optimal interaction of distamycin A with DNA may account for the down-regulation of both dihydrofolate reductase (DHFR) and thymidylate synthase (TS) and the up-regulation of spermidine/spermine N1-acetyltransferase (SSAT) caused by this compound. stallimycin 27-39 thymidylate synthetase Homo sapiens 128-148 21814787-7 2012 The optimal interaction of distamycin A with DNA may account for the down-regulation of both dihydrofolate reductase (DHFR) and thymidylate synthase (TS) and the up-regulation of spermidine/spermine N1-acetyltransferase (SSAT) caused by this compound. stallimycin 27-39 spermidine/spermine N1-acetyltransferase 1 Homo sapiens 179-219 21814787-7 2012 The optimal interaction of distamycin A with DNA may account for the down-regulation of both dihydrofolate reductase (DHFR) and thymidylate synthase (TS) and the up-regulation of spermidine/spermine N1-acetyltransferase (SSAT) caused by this compound. stallimycin 27-39 spermidine/spermine N1-acetyltransferase 1 Homo sapiens 221-225 21854010-0 2011 Molecular basis for the inhibition of HMGA1 proteins by distamycin A. stallimycin 56-68 high mobility group AT-hook 1 Homo sapiens 38-43 21854010-2 2011 Chemical shift and NOESY NMR experiments provide structural evidence for the displacement of an AT hook peptide (DNA binding motif of HMGA1 proteins) by both monomeric and dimeric distamycin. stallimycin 180-190 high mobility group AT-hook 1 Homo sapiens 134-139 21854010-5 2011 HMGA1a was effectively displaced by distamycin, but the cooperative binding exhibited by distamycin was eliminated by displaced HMGA1a. stallimycin 36-46 high mobility group AT-hook 1 Homo sapiens 0-6 21854010-5 2011 HMGA1a was effectively displaced by distamycin, but the cooperative binding exhibited by distamycin was eliminated by displaced HMGA1a. stallimycin 89-99 high mobility group AT-hook 1 Homo sapiens 128-134 21854010-6 2011 Additionally, these studies indicate that HMGA1a is displaced from the DNA by 1 equiv of distamycin, suggesting the ability to develop therapeutics that take advantage of the positively cooperative nature of HMGA1a binding. stallimycin 89-99 high mobility group AT-hook 1 Homo sapiens 42-48 21854010-6 2011 Additionally, these studies indicate that HMGA1a is displaced from the DNA by 1 equiv of distamycin, suggesting the ability to develop therapeutics that take advantage of the positively cooperative nature of HMGA1a binding. stallimycin 89-99 high mobility group AT-hook 1 Homo sapiens 208-214 21799846-6 2011 Therefore, in an attempt to promote the DNA binding of the isolated peptide, we have designed a conjugate compound of the E2 alpha-helix peptide and a derivative of the antibiotic distamycin, which involves simultaneous minor- and major-groove interactions. stallimycin 180-190 transcription factor 3 Homo sapiens 122-130 21799846-7 2011 METHODOLOGY/PRINCIPAL FINDINGS: An E2 alpha-helix peptide-distamycin conjugate was designed and synthesized. stallimycin 58-68 transcription factor 3 Homo sapiens 35-43 21314600-0 2010 Influence of distamycin, chromomycin, and UV-irradiation on extraction of histone H1 from rat liver nuclei by polyglutamic acid. stallimycin 13-23 H1.0 linker histone Rattus norvegicus 74-84 25761689-0 2015 Extraction of histone H1 and decondensation of nuclear chromatin with various Mg-dependent organization levels under treatment with polyglutamic acid and distamycin. stallimycin 154-164 H1.0 linker histone Rattus norvegicus 14-24 20699642-3 2010 This phenomenon was accompanied by elevation of PML transcripts after treatment with BrdU, TMD, DMA and CPT. stallimycin 96-99 PML nuclear body scaffold Homo sapiens 48-51 17950611-1 2008 We previously reported that distamycin A, a natural antibiotic known as a minor groove binder, could bind to DNA duplexes containing the (6-4) photoproduct formed at its target site, whereas the binding was not observed for duplexes containing the cis-syn cyclobutane pyrimidine dimer in the same sequence context. stallimycin 28-40 synemin Homo sapiens 252-255 20498830-0 2010 Distamycin A inhibits HMGA1-binding to the P-selectin promoter and attenuates lung and liver inflammation during murine endotoxemia. stallimycin 0-12 high mobility group AT-hook 1 Mus musculus 22-27 20498830-0 2010 Distamycin A inhibits HMGA1-binding to the P-selectin promoter and attenuates lung and liver inflammation during murine endotoxemia. stallimycin 0-12 selectin, platelet Mus musculus 43-53