PMID-sentid Pub_year Sent_text compound_name comp_offset prot_official_name organism prot_offset 16666809-7 1989 Radish seed and leaf arabino-3,6-galactan-proteins were resistant to the beta-galase alone but could be partially degraded by the enzyme after the treatment with a fungal alpha-l-arabinofuranosidase leaving some oligosaccharides consisting of d-galactose, uronic acid, l-arabinose, and other minor sugar components besides d-galactose as the main product. Arabinose 269-280 beta-galactosidase Raphanus sativus 73-84 2489081-4 1989 The residues Arg 151 and Asn 232 of ABP from bidentate hydrogen bonds with both L-arabinose and D-galactose, but not with D-fucose or D-glucose. Arabinose 80-91 sex hormone binding globulin Homo sapiens 36-39 2489081-5 1989 However in the case of L-arabinose, Arg 151 forms hydrogen bonds with the hydroxyl group at the C-4 atom and the ring oxygen, whereas in case of D-galactose it forms bonds with the hydroxyl groups at the C-4 and C-6 atoms of the pyranose ring. Arabinose 23-34 complement C4A (Rodgers blood group) Homo sapiens 96-99 2489081-5 1989 However in the case of L-arabinose, Arg 151 forms hydrogen bonds with the hydroxyl group at the C-4 atom and the ring oxygen, whereas in case of D-galactose it forms bonds with the hydroxyl groups at the C-4 and C-6 atoms of the pyranose ring. Arabinose 23-34 complement C6 Homo sapiens 212-215 2687118-3 1989 Upon induction with arabinose, the resulting Lpp::HMT fusion protein was produced 75,000-fold over uninduced cells, with a relatively stable mRNA (T1/2 of 8.3 min) and a completely stable protein. Arabinose 20-29 histamine N-methyltransferase Homo sapiens 50-53 7241575-2 1981 Cleavage of 55% of the lecithin in intact human erythrocytes by phospholipase A2 (bee venom) markedly inhibits the mediated transport of L-lactate (via the monocarboxylate carrier) and of L-arabinose (via the monosaccharide carrier), while the major anion exchange system (probed by oxalate) and diffusion via the lipid domain (probed by erythritol) remain essentially unaltered. Arabinose 188-199 phospholipase A2 group IB Homo sapiens 64-80 3036226-7 1987 Only ginsenoside-Rb2 and p-nitrophenyl alpha-L-arabinofuranoside which have the specific sugar residue (arabinose) showed a strong interaction with the polar head groups of vesicles. Arabinose 104-113 RB transcriptional corepressor like 2 Homo sapiens 17-20 24253332-4 1984 On the other hand, the synthesis of exocellular polysaccharides composed of glucose, galactose, mannose and arabinose etc., was stimulated and a clear increase of the Man/Ara ratio was observed in the presence of GA3. Arabinose 108-117 succinyl-CoA:glutarate-CoA transferase Homo sapiens 213-216 24253332-4 1984 On the other hand, the synthesis of exocellular polysaccharides composed of glucose, galactose, mannose and arabinose etc., was stimulated and a clear increase of the Man/Ara ratio was observed in the presence of GA3. Arabinose 171-174 succinyl-CoA:glutarate-CoA transferase Homo sapiens 213-216 6361538-7 1983 Fru, Gal, Ara, Xyl, Man, Lac and Suc also had the ability to form mutagens in the browning reactions with amino acids. Arabinose 10-13 zinc finger and BTB domain containing 22 Homo sapiens 0-3 6283309-6 1982 The expression of araE reached a maximum in the presence of 50 mM L-arabinose, and was significantly reduced in the presence of 50 mM L-arabinose, and was significantly reduced in the presence of D-glucose. Arabinose 66-77 arabinose:proton symporter Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 18-22 6283309-6 1982 The expression of araE reached a maximum in the presence of 50 mM L-arabinose, and was significantly reduced in the presence of 50 mM L-arabinose, and was significantly reduced in the presence of D-glucose. Arabinose 134-145 arabinose:proton symporter Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 18-22 16665943-3 1988 The sugar portion of HRGP(1) accounts for 94% of the molecule and contains galactose (66%) and arabinose (34%); these residues are present as polysaccharide side chains attached to hydroxyproline. Arabinose 95-104 histidine rich glycoprotein Homo sapiens 21-25 16665943-10 1988 The glycosylation pattern of hydroxyproline indicates that HRGP(2b) is related to and possibly a precursor of the wall HRGP; as in melon cell wall HRGP, Hyp-Ara(3) predominates, and small amounts of a putative Hyp-Ara(5) a hitherto unreported hyp-arabinoside, are recorded. Arabinose 156-160 histidine rich glycoprotein Homo sapiens 59-63 6168472-7 1981 Furthermore, there is a requirement for Igh gene homology between the strain producing the ARA and the strain in which the DTH response is induced. Arabinose 91-94 immunoglobulin heavy chain complex Mus musculus 40-43 7012118-4 1981 beta-Galactosidase activity was induced by L-arabinose in the araE-lac fusion strain, suggesting that araE expression is controlled at the level of transcription. Arabinose 43-54 arabinose:proton symporter Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 62-66 7012118-4 1981 beta-Galactosidase activity was induced by L-arabinose in the araE-lac fusion strain, suggesting that araE expression is controlled at the level of transcription. Arabinose 43-54 arabinose:proton symporter Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 102-106 6975421-6 1981 Both BV1 and B. gazogenes are able to grow utilizing xylose, cellobiose or arabinose, products of plant biosynthesis, as sole carbon sources. Arabinose 75-84 endogenous ecotropic MuLV 2 Mus musculus 5-8 31917981-2 2020 SHP-1 was mainly composed of galacturonic acid, galactose, rhamnose and arabinose (molar ratio = 46.59%:17.95%:14.77%:13.97%) with small amounts of fucose, glucose, mannose and xylose. Arabinose 72-81 nuclear receptor subfamily 0 group B member 2 Homo sapiens 0-5 868388-1 1977 Ultraviolet light (PRK-2) induces the formation of various amino acids (lysine, asparaginic, as well as traces of some other acids) in mannose, glucose and arabinose solutions containing various nitrates. Arabinose 156-165 protein kinase N2 Homo sapiens 19-24 1215619-1 1975 Active transport of sugars (D-galactose, D-glucose, 3-0-methylglucose and L-arabinose) by sacs of everted intestine of snail (Cryptomphalus hortensis) was strongly inhibited, but not abolished, when all Na from the bathing solutions was substituted by K, Tris, Mg or Ca. Arabinose 74-85 snail family transcriptional repressor 1 Homo sapiens 119-124 33272761-3 2021 Patatin was an O-linked glycoprotein that contained fucose monosaccharides, as well as mannose, rhamnose, glucose, galactose, xylose, and arabinose. Arabinose 138-147 Patatin class I Solanum tuberosum 0-7 33974923-6 2021 Further, the carbohydrate affinity of this lectin was found with mannitol, adonitol, L-arabinose, L-rhamnose, D-galactose and sorbitol. Arabinose 85-96 lectin Musa acuminata 43-49 33546740-3 2021 Ion chromatography (IC) revealed that THP contained glucose, arabinose, mannose, glucuronic acid, galactose and galacturonic acid, in different molar ratios. Arabinose 61-70 uromodulin Mus musculus 38-41 33507101-11 2021 Moreover, the tested strains were positive for catalase but negative for oxidase and were able to utilize D-glucose, L-arabinose, and D-mannitol. Arabinose 117-128 catalase Pseudomonas oryzihabitans 47-55 32504713-3 2020 In this study, a polysaccharide from the Rhizoma of Atractylodis macrocephala Koidz., designated as RAMP2, with an absolute molecular weight of 4.354 x 103 Da was isolated and found to be composed of mannose, galacturonic acid, glucose, galactose and arabinose. Arabinose 251-260 receptor (calcitonin) activity modifying protein 2 Mus musculus 100-105 32686492-5 2022 The glycosyl residues of ICP-1 were composed of (1 ), (1 4) and (1 6) glucose, (1 5) arabinose, (1 4) galacturonic acid and (1 3,6) mannose. Arabinose 85-94 ATPase phospholipid transporting 8B1 Homo sapiens 25-30 32335047-2 2020 Gas chromatography analysis showed that TPSN was composed of d-glucose, l-arabinose and d-galactose residues at a molar ratio of 90.0: 9.1: 0.9. Arabinose 72-83 TAP binding protein Homo sapiens 40-44 239732-6 1975 Especially, Rg1, Rf and Rb 1, which contained glucose as a sugar component, were weaker in their toxicities than the rest, which contained arabinose and/or rhamnose. Arabinose 139-148 RB transcriptional corepressor 1 Mus musculus 24-28 4722437-5 1973 Both polar and non-polar substituents at C-6 enhance the affinity of d-glucose derivatives relative to d-xylose, and d-galactose derivatives relative to l-arabinose, and it is suggested that the carrier region around C-6 of the sugar may contain both hydrophobic and polar binding groups. Arabinose 153-164 complement C6 Homo sapiens 41-44 4722437-5 1973 Both polar and non-polar substituents at C-6 enhance the affinity of d-glucose derivatives relative to d-xylose, and d-galactose derivatives relative to l-arabinose, and it is suggested that the carrier region around C-6 of the sugar may contain both hydrophobic and polar binding groups. Arabinose 153-164 complement C6 Homo sapiens 217-220 5904942-0 1966 Effects of growth hormone on the penetration of L-arabinose into adipose tissue. Arabinose 48-59 growth hormone 1 Homo sapiens 11-25 33892066-8 2021 RESULTS: The average molecular weight of OSP was distributed at 27972 Da, OSP was composed of xylose, mannose, glucose, and galactose with the ratio of 2.9:6.6:166:2.6, with a trace amount of fucose, arabinose and rhamnose. Arabinose 200-209 claudin 11 Mus musculus 41-44 33892066-8 2021 RESULTS: The average molecular weight of OSP was distributed at 27972 Da, OSP was composed of xylose, mannose, glucose, and galactose with the ratio of 2.9:6.6:166:2.6, with a trace amount of fucose, arabinose and rhamnose. Arabinose 200-209 claudin 11 Mus musculus 74-77 33734700-5 2021 l-arabinose-treated mice exhibited a marked reduction in the productions of total immunoglobulin E (IgE), gliadin-specific IgE, gliadin-specific IgG1, and histamine, with an increase in IgG2a level as compared with gliadin-sensitized mice. Arabinose 0-11 immunoglobulin heavy variable V1-9 Mus musculus 186-191 33734700-6 2021 Beside that, a significant decrease in Th2-related cytokine level, IL-4, and an increase in Th1-related cytokine level, IFN-gamma, in the serum and splenocytes were observed after treatment with l-arabinose. Arabinose 195-206 interleukin 4 Mus musculus 67-71 33734700-6 2021 Beside that, a significant decrease in Th2-related cytokine level, IL-4, and an increase in Th1-related cytokine level, IFN-gamma, in the serum and splenocytes were observed after treatment with l-arabinose. Arabinose 195-206 interferon gamma Mus musculus 120-129 33734700-8 2021 In addition, gliadin-induced intestinal barrier impairment was blocked by l-arabinose treatment via regulation of TJ proteins and suppression of p38 MAPK and p65 NF-kappaB inflammation signaling pathways. Arabinose 74-85 mitogen-activated protein kinase 14 Mus musculus 145-153 33734700-8 2021 In addition, gliadin-induced intestinal barrier impairment was blocked by l-arabinose treatment via regulation of TJ proteins and suppression of p38 MAPK and p65 NF-kappaB inflammation signaling pathways. Arabinose 74-85 v-rel reticuloendotheliosis viral oncogene homolog A (avian) Mus musculus 158-171 33734700-9 2021 Notably, the results confirmed that l-arabinose treatment increased CD4+ Foxp3+ T cell populations and Treg-related factors associated with increased expression of IL-2 and activation of STAT5 in gliadin-sensitized mice. Arabinose 36-47 CD4 antigen Mus musculus 68-71 33734700-9 2021 Notably, the results confirmed that l-arabinose treatment increased CD4+ Foxp3+ T cell populations and Treg-related factors associated with increased expression of IL-2 and activation of STAT5 in gliadin-sensitized mice. Arabinose 36-47 forkhead box P3 Mus musculus 73-78 33734700-9 2021 Notably, the results confirmed that l-arabinose treatment increased CD4+ Foxp3+ T cell populations and Treg-related factors associated with increased expression of IL-2 and activation of STAT5 in gliadin-sensitized mice. Arabinose 36-47 interleukin 2 Mus musculus 164-168 33734700-9 2021 Notably, the results confirmed that l-arabinose treatment increased CD4+ Foxp3+ T cell populations and Treg-related factors associated with increased expression of IL-2 and activation of STAT5 in gliadin-sensitized mice. Arabinose 36-47 signal transducer and activator of transcription 5A Mus musculus 187-192 33657497-2 2021 Monosaccharides, e.g. fructose, glucose, and arabinose are present in most foods consumed daily, whether, in natural or industrialized forms, and their concentration in the human bloodstream can impact the formation of advanced glycation end-products (AGEs, prevalent in people with diabetes) impacting the profile of Human Serum Albumin (HSA) in biodistribution of endogenous and exogenous compounds. Arabinose 45-54 albumin Homo sapiens 324-337 33502423-9 2021 l-Arabinose also had beneficial effects on glycogen synthesis by inactivating GSK3beta. Arabinose 0-11 glycogen synthase kinase 3 alpha Mus musculus 78-86 33633757-4 2021 AtFUT4 and AtFUT6 transfer fucose (Fuc) onto arabinose (Ara) residues of arabinogalactan (AG) proteins (AGPs) and have been postulated to be non-redundant AGP-specific FUTs. Arabinose 45-54 fucosyltransferase 4 Arabidopsis thaliana 0-6 33633757-4 2021 AtFUT4 and AtFUT6 transfer fucose (Fuc) onto arabinose (Ara) residues of arabinogalactan (AG) proteins (AGPs) and have been postulated to be non-redundant AGP-specific FUTs. Arabinose 45-54 fucosyltransferase 6 Arabidopsis thaliana 11-17 33633757-4 2021 AtFUT4 and AtFUT6 transfer fucose (Fuc) onto arabinose (Ara) residues of arabinogalactan (AG) proteins (AGPs) and have been postulated to be non-redundant AGP-specific FUTs. Arabinose 45-54 alkylglycerone phosphate synthase Homo sapiens 104-108 33633757-4 2021 AtFUT4 and AtFUT6 transfer fucose (Fuc) onto arabinose (Ara) residues of arabinogalactan (AG) proteins (AGPs) and have been postulated to be non-redundant AGP-specific FUTs. Arabinose 56-59 fucosyltransferase 4 Arabidopsis thaliana 0-6 33633757-4 2021 AtFUT4 and AtFUT6 transfer fucose (Fuc) onto arabinose (Ara) residues of arabinogalactan (AG) proteins (AGPs) and have been postulated to be non-redundant AGP-specific FUTs. Arabinose 56-59 fucosyltransferase 6 Arabidopsis thaliana 11-17 33633757-4 2021 AtFUT4 and AtFUT6 transfer fucose (Fuc) onto arabinose (Ara) residues of arabinogalactan (AG) proteins (AGPs) and have been postulated to be non-redundant AGP-specific FUTs. Arabinose 56-59 alkylglycerone phosphate synthase Homo sapiens 104-108 32450234-15 2020 PCP1.1, PCP1.2 and PCP2.1 were composed of fucose, arabinose, galactose, glucose, mannose, galacturonic acid and glucuronic acid; and PCP2.2 was composed of arabinose, galactose, glucose, galacturonic acid and glucuronic acid. Arabinose 51-60 Purkinje cell protein 2 Homo sapiens 19-23 32070517-2 2020 Structural characterization showed that MOP-3 had a molecular weight (MW) of 4.033 x 106 Da and was composed of arabinose, glucose and galactose with a molar ratio of 47.73:1.00:57.65. Arabinose 112-121 morphine preference 3 Mus musculus 40-45 31958555-6 2020 LCP-1 had a molecular weight of 2.303 x 105 Da and 7.519 x 103 Da, and was composed of mannose (Man), ribose (Rib), rhamnose (Rha), glucuronic acid (GluA), galacturonic acid (GalA), glucose (Glu), galactose (Gal), xylose (Xyl), arabinose (Ara) and fucuronic (Fuc). Arabinose 228-237 lymphocyte cytosolic protein 1 Mus musculus 0-5 31958555-6 2020 LCP-1 had a molecular weight of 2.303 x 105 Da and 7.519 x 103 Da, and was composed of mannose (Man), ribose (Rib), rhamnose (Rha), glucuronic acid (GluA), galacturonic acid (GalA), glucose (Glu), galactose (Gal), xylose (Xyl), arabinose (Ara) and fucuronic (Fuc). Arabinose 239-242 lymphocyte cytosolic protein 1 Mus musculus 0-5 31958555-7 2020 The molecular weight of LCP-2 was 2.655 x 105 Da, and its monosaccharide constituents were Man, Rib, Rha, GluA, Glu, Gal, Xyl, Ara and Fuc. Arabinose 127-130 lymphocyte cytosolic protein 2 Mus musculus 24-29 32064252-9 2019 Likewise, mutant Gal2 transporter have been selected supporting specific uptake of L-arabinose. Arabinose 83-94 galactose permease GAL2 Saccharomyces cerevisiae S288C 17-21 31461539-0 2020 Abscisic acid positively regulates L-Arabinose metabolism to inhibit seed germination through ABI4-mediated transcriptional promotions of MUR4 in Arabidopsis thaliana. Arabinose 35-46 NAD(P)-binding Rossmann-fold superfamily protein Arabidopsis thaliana 138-142 31877915-3 2019 WAP was mainly composed of glucose, galactose, arabinose and glacturonic acid, with glucan, arabinogalactan and RG-I regions, and it showed loosely irregular sheet conformation. Arabinose 47-56 whey acidic protein Rattus norvegicus 0-3 31461539-0 2020 Abscisic acid positively regulates L-Arabinose metabolism to inhibit seed germination through ABI4-mediated transcriptional promotions of MUR4 in Arabidopsis thaliana. Arabinose 35-46 Integrase-type DNA-binding superfamily protein Arabidopsis thaliana 94-98 31401282-2 2019 Physicochemical characterization showed that PSP-1 with the average molecular weight of 1.036 x 106 Da was composed of fucose, arabinose, galactose, glucose, xylose, mannose, galacturonic acid and glucuronic acid in a molar ratio of 18.45:2.15:19.06:1.89:16.07:1.00:5.74:20.09. Arabinose 127-136 paraspeckle component 1 Homo sapiens 45-50 31558605-1 2019 Feruloyl esterases (EC 3.1.1.73), belonging to carbohydrate esterase family 1 (CE1), hydrolyze ester bonds between ferulic acid (FA) and arabinose moieties in arabinoxylans. Arabinose 137-146 carboxylesterase 1 Homo sapiens 47-77 31558605-1 2019 Feruloyl esterases (EC 3.1.1.73), belonging to carbohydrate esterase family 1 (CE1), hydrolyze ester bonds between ferulic acid (FA) and arabinose moieties in arabinoxylans. Arabinose 137-146 carboxylesterase 1 Homo sapiens 79-82 31382820-6 2019 QPS1, with a molecular weight of 34.0 kDa, was mainly composed of mannose, rhamnose, galacturonic acid, glucose, galactose, xylose and arabinose at a molar ratio of 2.63:2.40:1.64:6.28:1.95:2.48:5.01. Arabinose 135-144 succinate dehydrogenase complex, subunit C, integral membrane protein Mus musculus 0-4 31501960-0 2019 Deletion of PHO13 improves aerobic L-arabinose fermentation in engineered Saccharomyces cerevisiae. Arabinose 35-46 4-nitrophenylphosphatase Saccharomyces cerevisiae S288C 12-17 31501960-4 2019 PHO13 deletion increased arabinose consumption rate and specific ethanol productivity under aerobic conditions and consequently depleted sedoheptulose by activation of the TAL1 gene. Arabinose 25-34 4-nitrophenylphosphatase Saccharomyces cerevisiae S288C 0-5 31426957-3 2019 Monosaccharide composition analysis revealed that LRP3-S1 was composed of rhamnose, galacturonic acid, galactose, xylose and arabinose in a molar ratio of 14.4: 17.7: 26.6: 16.4: 24.9. Arabinose 125-134 LDL receptor related protein 3 Homo sapiens 50-54 31426994-2 2019 Monosaccharide composition analysis indicated that SLP-4 was composed of mannose, rhamnose, galacturonic acid, glucose, galactose, xylose and arabinose in a molar ratio of 0.825:2.030:14.998:0.841:8.260:4.039:6.009. Arabinose 142-151 sphingosine-1-phosphate receptor 4 Homo sapiens 51-56 31376448-4 2019 AGC1 (average molecular weight: 5.2kDa) was predominantly composed of galactose (>60%) along with the presence of several other neutral sugars such as arabinose, xylose, glucose, mannose and rhamnose in minor amounts. Arabinose 151-160 aggrecan Mus musculus 0-4 31336597-6 2019 The PCA1 isolated from P. carruthersii is a galactan-type polysaccharide, containing galactose (77.0%), 3-O-methyl galactose (20.0%), and arabinose (3.0%). Arabinose 138-147 ectonucleotide pyrophosphatase/phosphodiesterase 1 Mus musculus 4-8 31532795-2 2019 Fatty acid desaturase 2 (FADS2) gene cluster encodes key enzymes in the conversion of essential omega-3 and omega-6 fatty acids into active arachidonic (ArA) and eicosapentaenoic acids (EPA), which influence cardiovascular outcomes. Arabinose 153-156 fatty acid desaturase 2 Homo sapiens 0-23 31532795-2 2019 Fatty acid desaturase 2 (FADS2) gene cluster encodes key enzymes in the conversion of essential omega-3 and omega-6 fatty acids into active arachidonic (ArA) and eicosapentaenoic acids (EPA), which influence cardiovascular outcomes. Arabinose 153-156 fatty acid desaturase 2 Homo sapiens 25-30 31301093-12 2019 In addition, there is a correlation between SEF and clearance per cm2 NSA of L-arabinose, a nonactively transported paracellular probe. Arabinose 77-88 interleukin 17 receptor D Homo sapiens 44-47 31412567-4 2019 The four purified polysaccharides (Pe1, Pe2, Pe3, Pe4) from TCBL are mainly composed of arabinose, galactose, glucose, a small amount of xylose, and mannose. Arabinose 88-97 ETS variant transcription factor 3 Homo sapiens 35-38 31269952-11 2019 Furthermore, albumins, LDH, ATP, MMP-9, IL-6, and IL-1beta were increased after 24 h. CONCLUSIONS: The overall results indicate that IL-1beta, IL-6 and PGE2, were the earliest proinflammatory parameters that increased in the synovial fluid of animals with ARA. Arabinose 256-259 interleukin 1 beta Bos taurus 133-141 31269952-11 2019 Furthermore, albumins, LDH, ATP, MMP-9, IL-6, and IL-1beta were increased after 24 h. CONCLUSIONS: The overall results indicate that IL-1beta, IL-6 and PGE2, were the earliest proinflammatory parameters that increased in the synovial fluid of animals with ARA. Arabinose 256-259 interferon beta-2 Bos taurus 143-147 30981336-1 2019 ALP-2 was composed of rhamnose, glucuronic acid, galacturonic acid, glucose, galactose, xylose and arabinose. Arabinose 99-108 apolipoprotein A-II Mus musculus 0-5 30936012-5 2019 SP1-1 (4.56 x 105 Da) was mainly composed of mannose, ribose, glucuronic acid, glucose, xylose and arabinose with molar ratios of 2.14:3.61:1:2.86:5.98:36.39. Arabinose 99-108 trans-acting transcription factor 1 Mus musculus 0-5 31353707-5 2019 The results indicated that DIP-1 was consisted of mannose, glucosamine, glucose, galactose and arabinose in a ratio of 1.00:0.42:18.36:14.17:0.81, and its molecular weight was 218.3 kDa. Arabinose 95-104 cyclin D1 binding protein 1 Homo sapiens 27-32 30879666-2 2019 LPD2 was composed of arabinose, mannose, glucose, and galactose in a molar ratio of 0.25:0.49:1:0.5 with average molecular weight of 9.64 x 106 Da. Arabinose 21-30 neuroguidin Homo sapiens 0-4 31049543-2 2019 Structural characterization revealed that PSP-2 with a molecular weight of 144.8 kDa was composed of fucose (21.6%), arabinose (2.5%), galactose (22.4%), glucose (2.2%), xylose (18.8%), mannose (1.2%), glucuronic acid (7.7%) and galacturonic acid (23.6%). Arabinose 117-126 regenerating family member 1 beta Homo sapiens 42-47 30926436-3 2019 UPP-2 mainly consisted of xylose (64.55%), glucose (23.81%), arabinose (5.90%) and mannose (4.26%), and its main glycosidic linkage types included 2)-alpha-D-Xylp-(1 , 4)-alpha-D-Glcp-(1 , alpha-D-Xylp-(1 and 2,4)-beta-D-Xylp-(1 . Arabinose 61-70 uridine phosphorylase 2 Mus musculus 0-5 30521918-2 2019 MLP-1, with a molecular weight of 2,792,624 Da, consisted of arabinose, glucose, xylose, rhamnose, and mannose in a molar ratio of 1:1.13:2.35:6.74:8.85. Arabinose 61-70 ATP binding cassette subfamily C member 6 Rattus norvegicus 0-5 30553856-5 2019 Monosaccharide composition analysis revealed that ARP was composed of Gal, Ara, Glu, Man, Rha and Fuc at a molar ratio of 53.8:21.3:11.7:6.8:4.3:2.2. Arabinose 75-78 arginine-glutamic acid dipeptide repeats Homo sapiens 50-53 30553856-6 2019 Methylation analysis suggested that ARP was likely an arabinogalactan and that its backbone mainly consisted of Galp residues of 1,6-linkages and Ara residues of 1,5- or 1,3-linkages. Arabinose 146-149 arginine-glutamic acid dipeptide repeats Homo sapiens 36-39 30605256-1 2019 This work reports the one-pot enzymatic cascade that completely converts l-arabinose to l-ribulose using four reactions catalyzed by pyranose 2-oxidase (P2O), xylose reductase, formate dehydrogenase, and catalase. Arabinose 73-84 catalase Homo sapiens 204-212 30714735-3 2019 The average molecular weight of Ali-1 is 14.3 ku, and it is composed of arabinose (14.31%), xylose (57.69%), galacturonic acid (13.03%), and glucuronic acid (14.86%). Arabinose 72-81 adhesion molecule with Ig like domain 2 Homo sapiens 32-37 30206714-7 2019 Furthermore, knockdown of ppargamma induced a high conversion of 18:3n-3 to 18:4n-3 and 18:2n-6 to 18:3n-6, while ppargamma mRNA overexpression led to a lower conversion of that, and finally a significant decrease of 20:4n-6(ARA), 20:5n-3(EPA), and 22:6n-3(DHA) production. Arabinose 225-228 peroxisome proliferator activated receptor gamma Homo sapiens 26-35 30177181-5 2018 The Ara residues were substituted at C-6 of 1,6-linked Galp consisting of alpha-L-Araf-(1 3)-alpha-L-Araf-(1 6)-beta-D-Galp-(1 and beta-L-Arap-(1 6)-beta-D-Galp-(1 . Arabinose 4-7 galanin-like peptide Mus musculus 55-59 30177181-5 2018 The Ara residues were substituted at C-6 of 1,6-linked Galp consisting of alpha-L-Araf-(1 3)-alpha-L-Araf-(1 6)-beta-D-Galp-(1 and beta-L-Arap-(1 6)-beta-D-Galp-(1 . Arabinose 4-7 galanin-like peptide Mus musculus 119-123 30177181-5 2018 The Ara residues were substituted at C-6 of 1,6-linked Galp consisting of alpha-L-Araf-(1 3)-alpha-L-Araf-(1 6)-beta-D-Galp-(1 and beta-L-Arap-(1 6)-beta-D-Galp-(1 . Arabinose 4-7 galanin-like peptide Mus musculus 119-123 29563966-7 2018 An l-arabinose-metabolizing S. cerevisiae strain in which GAL2 was replaced by PcaraT showed 450-fold lower residual substrate concentrations in l-arabinose-limited chemostat cultures than a congenic strain in which l-arabinose import depended on Gal2 (4.2 x 10-3 and 1.8 g L-1, respectively). Arabinose 3-14 galactose permease GAL2 Saccharomyces cerevisiae S288C 58-62 29920367-3 2018 Physicochemical characterization indicated that GLP had a molecular weight of 108 kDa and consisted of glucose (35.56%), xylose (40.11%), rhamnose (16.45%) and l-arabinose (7.88%) in a molar radio of 4.51: 5.09: 2.88: 1.0. Arabinose 160-171 euchromatic histone lysine methyltransferase 1 Homo sapiens 48-51 29802924-2 2018 Physicochemical analysis showed that RRP1 was composed of mannose, rhamnose, galacturonic acid, glucose, galactose and arabinose with a relative molar ratio of 0.69:0.11:0.15:1:0.51:7.5 and RRP2 was consisted of mannose, rhamnose, galacturonic acid, glucose, galactose and arabinose (relative molar ratio = 0.15:0.19:1.01:0.18:0.47:1). Arabinose 119-128 ribosomal RNA processing 1 Mus musculus 37-41 30088438-2 2018 Aim of this study was to evaluate impact of genetic variants in the key genes involved in ara-C metabolism on the leukemic cell intracellular levels of ara-CTP. Arabinose 90-93 solute carrier family 25 member 1 Homo sapiens 156-159 30159031-0 2018 l-Arabinose triggers its own uptake via induction of the arabinose-specific Gal2p transporter in an industrial Saccharomyces cerevisiae strain. Arabinose 0-11 galactose permease GAL2 Saccharomyces cerevisiae S288C 76-81 30159031-4 2018 Gal2p-the most prominent transporter enabling l-arabinose uptake in S. cerevisiae wild-type strains-has an affinity for the transport of l-arabinose, d-glucose, and d-galactose. Arabinose 46-57 galactose permease GAL2 Saccharomyces cerevisiae S288C 0-5 30159031-4 2018 Gal2p-the most prominent transporter enabling l-arabinose uptake in S. cerevisiae wild-type strains-has an affinity for the transport of l-arabinose, d-glucose, and d-galactose. Arabinose 137-148 galactose permease GAL2 Saccharomyces cerevisiae S288C 0-5 30159031-8 2018 RT-qPCR and RNA-Seq experiments confirmed that l-arabinose can trigger its own uptake via the induction of GAL2 expression. Arabinose 47-58 galactose permease GAL2 Saccharomyces cerevisiae S288C 107-111 30159031-9 2018 Expression levels of GAL2 during growth on l-arabinose reached up to 21% of those obtained with d-galactose as sole carbon and energy source. Arabinose 43-54 galactose permease GAL2 Saccharomyces cerevisiae S288C 21-25 30159031-10 2018 l-Arabinose-induced GAL2 expression was also subject to catabolite repression by d-glucose. Arabinose 0-11 galactose permease GAL2 Saccharomyces cerevisiae S288C 20-24 30229010-1 2018 The dataset presented in this article is related to the research article entitled "One-pot, two-step transaminase and transketolase synthesis of l-gluco-heptulose from l-arabinose" (Bawn et al., 2018 in press) [1]. Arabinose 168-179 transketolase Homo sapiens 118-131 30229010-2 2018 This article presents data on initial experiments that were carried out to investigate new thermostable transketolase (TK) activities with l-arabinose. Arabinose 139-150 transketolase Homo sapiens 104-117 30229010-2 2018 This article presents data on initial experiments that were carried out to investigate new thermostable transketolase (TK) activities with l-arabinose. Arabinose 139-150 transketolase Homo sapiens 119-121 29525161-4 2018 SLP-1, with a molecular weight of 90 KDa, was mainly composed of galacturonic acid, galactose and arabinose in a molar ratio of 17.6:41.7:33.9. Arabinose 98-107 synaptotagmin like 1 Homo sapiens 0-5 29525161-5 2018 SLP-2, with a molecular weight of 44 KDa, was mainly composed of mannose, galacturonic acid, galactose and arabinose in a molar ratio of 11.5:69.5:9.3:8.2. Arabinose 107-116 synaptotagmin like 2 Homo sapiens 0-5 29446495-6 2018 Using correlative phenotyping of structural and biochemical characteristics, unique features of the cobl2 extruded mucilage are revealed, including: "unraveled" ray morphology, loss of primary cell wall "pyramidal" organization, reduced Ruthenium red staining intensity of the adherent mucilage layer, and increased levels of the monosaccharides arabinose and galactose. Arabinose 346-355 COBRA-like protein 2 precursor Arabidopsis thaliana 100-105 30377844-6 2018 DLP-1 was composed of D-(+)-galactose, DL-arabinose, and L-(+)-rhamnose with a molar ratio of 3.21:1.11:0.23, and traces of D-xylose, D-glucose, and D-(+)-mannose. Arabinose 39-51 dynamin 1 like Homo sapiens 0-5 29969638-2 2018 The physicochemical evaluations indicate that FPS is mainly composed of glucose, mannose, galactose, fucose, arabinose and glucuronic acid with the mole percentages of 70.30%, 8.70%, 12.88%, 0.79%, 5.04% and 1.57%, respectively. Arabinose 109-118 farnesyl diphosphate synthase Homo sapiens 46-49 29802924-2 2018 Physicochemical analysis showed that RRP1 was composed of mannose, rhamnose, galacturonic acid, glucose, galactose and arabinose with a relative molar ratio of 0.69:0.11:0.15:1:0.51:7.5 and RRP2 was consisted of mannose, rhamnose, galacturonic acid, glucose, galactose and arabinose (relative molar ratio = 0.15:0.19:1.01:0.18:0.47:1). Arabinose 273-282 ribosomal RNA processing 1 Mus musculus 37-41 29802924-3 2018 Periodate oxidation and Smith degradation analysis revealed that, in RRP1, part of the arabinose and glucose residues were 1 3,6/1 3/1 2,3/1 3,4/1 2,4/1 2,3,4-linked, and the mannose, rhamnose and galactose residues were 1 2,6/1 6/1 2/1 /1 4,6/1 4-linked. Arabinose 87-96 ribosomal RNA processing 1 Mus musculus 69-73 29802924-4 2018 In RRP2, the rhamnose, glucose and galactose residues were linked by 1 3,6/1 3/1 2,3/1 3,4/1 2,4/1 2,3,4 linkages, and the arabinose and mannose residues were 1 2/1 6/1 4-linked. Arabinose 135-144 ribosome binding protein 1 Mus musculus 3-7 29891277-4 2018 The purified P-selectin-binding moiety of BCPS, designated as BCPS-m, was mainly composed of arabinose, galactose and glucose, and had a relative molecular weight of 3600 Da. Arabinose 93-102 selectin P Homo sapiens 13-23 29860442-0 2018 Laboratory evolution of a glucose-phosphorylation-deficient, arabinose-fermenting S. cerevisiae strain reveals mutations in GAL2 that enable glucose-insensitive l-arabinose uptake. Arabinose 61-70 galactose permease GAL2 Saccharomyces cerevisiae S288C 124-128 29860442-0 2018 Laboratory evolution of a glucose-phosphorylation-deficient, arabinose-fermenting S. cerevisiae strain reveals mutations in GAL2 that enable glucose-insensitive l-arabinose uptake. Arabinose 161-172 galactose permease GAL2 Saccharomyces cerevisiae S288C 124-128 29860442-5 2018 In 14C-sugar-transport assays, Gal2N376S, Gal2N376T and Gal2N376I substitutions showed a much lower glucose sensitivity of l-arabinose transport and a much higher Km for d-glucose transport than wild-type Gal2. Arabinose 123-134 galactose permease GAL2 Saccharomyces cerevisiae S288C 31-35 29860442-7 2018 Gal2N376T, T89I and Gal2T89I variants showed a lower Km for l-arabinose and a higher Km for d-glucose than wild-type Gal2, while reverting Gal2N376T, T89I to Gal2N376 in an evolved strain negatively affected anaerobic growth on l-arabinose. Arabinose 60-71 galactose permease GAL2 Saccharomyces cerevisiae S288C 0-4 29860442-7 2018 Gal2N376T, T89I and Gal2T89I variants showed a lower Km for l-arabinose and a higher Km for d-glucose than wild-type Gal2, while reverting Gal2N376T, T89I to Gal2N376 in an evolved strain negatively affected anaerobic growth on l-arabinose. Arabinose 228-239 galactose permease GAL2 Saccharomyces cerevisiae S288C 0-4 29655744-5 2018 HP1 and HP2 had the same monosaccharide species and manganese contents, but differed in their molar rhamnose, arabinose, mannose, glucose, galactose and uronic acid contents (7.32 and 35.9%, as galacturonic acid), Mw (68.7 and 111 kDa, respectively), and contents of K, Cr, Cu, Zn, Pb and Ca. Arabinose 110-119 chromobox 5 Mus musculus 0-3 29407417-6 2018 The Arabidopsis thaliana-originated l-arabinose transporter gene (STP2)-expressing strain exhibited a high l-arabinose uptake rate of 0.103 g/g cell/h and the expression of l-arabinose isomerase from Lactobacillus sakei 23 K showed 30% of conversion (9 g/L) from 30 g/L of l-arabinose. Arabinose 36-47 sugar transporter 2 Arabidopsis thaliana 66-70 29418030-6 2018 In this study, we show that AtGALS1 is bifunctional, catalyzing both the transfer of galactose from UDP-alpha-d-Gal and the transfer of an arabinopyranose from UDP-beta-l-Arap to galactan chains. Arabinose 139-154 glycosyltransferase family protein (DUF23) Arabidopsis thaliana 28-35 29563966-7 2018 An l-arabinose-metabolizing S. cerevisiae strain in which GAL2 was replaced by PcaraT showed 450-fold lower residual substrate concentrations in l-arabinose-limited chemostat cultures than a congenic strain in which l-arabinose import depended on Gal2 (4.2 x 10-3 and 1.8 g L-1, respectively). Arabinose 3-14 galactose permease GAL2 Saccharomyces cerevisiae S288C 247-251 29563966-7 2018 An l-arabinose-metabolizing S. cerevisiae strain in which GAL2 was replaced by PcaraT showed 450-fold lower residual substrate concentrations in l-arabinose-limited chemostat cultures than a congenic strain in which l-arabinose import depended on Gal2 (4.2 x 10-3 and 1.8 g L-1, respectively). Arabinose 145-156 galactose permease GAL2 Saccharomyces cerevisiae S288C 58-62 29563966-7 2018 An l-arabinose-metabolizing S. cerevisiae strain in which GAL2 was replaced by PcaraT showed 450-fold lower residual substrate concentrations in l-arabinose-limited chemostat cultures than a congenic strain in which l-arabinose import depended on Gal2 (4.2 x 10-3 and 1.8 g L-1, respectively). Arabinose 145-156 galactose permease GAL2 Saccharomyces cerevisiae S288C 58-62 29563966-8 2018 Inhibition of l-arabinose transport by the most abundant sugars in hydrolysates, d-glucose and d-xylose was far less pronounced than observed with Gal2. Arabinose 14-25 galactose permease GAL2 Saccharomyces cerevisiae S288C 147-151 29174358-4 2018 Monosaccharide composition analysis indicated that the LBP1B-S-2 was composed of rhamnose, arabinose, galactose and glucuronic acid in a molar ratio of 3.13: 53.55: 39.37: 3.95. Arabinose 91-100 upstream binding protein 1 Homo sapiens 55-60 28412343-2 2017 The monosaccharide component of PAP1-A was L-rhamnose, L-arabinose, L-fucose, D-xylose, D-mannose, D-glucose and D-galactose in the molar ration of 1.82: 1.53: 1.42: 1.31: 5.24: 1: 12.35. Arabinose 55-66 PDGFA associated protein 1 Mus musculus 32-36 29342124-6 2018 Furthermore, ARA increased peroxisome proliferator-activated receptor gamma coactivator 1 alpha (PGC1alpha) expression, and the phosphorylation of adenosine monophosphate-activated protein kinase (AMPK) in skeletal muscle tissues, and also prevented skeletal muscle atrophy. Arabinose 13-16 peroxisome proliferative activated receptor, gamma, coactivator 1 alpha Mus musculus 97-106 29399067-7 2018 TGF-beta1 neutralizing antibody also restored the Th1/Th2 balance and ameliorated Treg cell defects induced by ARA. Arabinose 111-114 transforming growth factor, beta 1 Mus musculus 0-9 29399067-9 2018 Therefore, TGF-beta1 neutralizing antibody may be an effective medicine for the treatment of ARA. Arabinose 93-96 transforming growth factor, beta 1 Mus musculus 11-20 28821118-3 2017 Preliminary physicochemical analysis identified arabinose (Ara), galactose (Gal) and glucose (Glc) were the major monosaccharides of S-CP1-8, with average Molecular weight (Mw) of 970kDa and contained sulfate with degree of substitution (DS) of 0.12. Arabinose 48-57 stem cell proliferation 1 Mus musculus 133-140 28821118-3 2017 Preliminary physicochemical analysis identified arabinose (Ara), galactose (Gal) and glucose (Glc) were the major monosaccharides of S-CP1-8, with average Molecular weight (Mw) of 970kDa and contained sulfate with degree of substitution (DS) of 0.12. Arabinose 59-62 stem cell proliferation 1 Mus musculus 133-140 28732858-5 2017 STP-1 had a major molecular weight of 190.4kDa, and comprised of arabinose, galactose, glucose, xylose, mannose, galacturonic acid, and glucuronic acid with molar percentages of 1.94, 30.7, 4.54, 23.2, 17.6, 8.11, and 13.9%, respectively. Arabinose 65-74 transition protein 1 Homo sapiens 0-5 29311272-0 2018 Sugar Transporter STP7 Specificity for l-Arabinose and d-Xylose Contrasts with the Typical Hexose Transporters STP8 and STP12. Arabinose 39-50 sugar transporter protein 7 Arabidopsis thaliana 18-22 29311272-0 2018 Sugar Transporter STP7 Specificity for l-Arabinose and d-Xylose Contrasts with the Typical Hexose Transporters STP8 and STP12. Arabinose 39-50 sugar transporter protein 12 Arabidopsis thaliana 120-125 29311272-8 2018 In contrast to all other STPs, STP7 does not transport hexoses but is specific for the pentoses l-arabinose and d-xylose. Arabinose 96-107 sugar transporter protein 7 Arabidopsis thaliana 31-35 29254034-2 2018 REPS2-A was composed of galactose, arabinose, glucose, and mannose at a molar ratio of 63.1:0.2:18.3:18.3, respectively, with a molecular weight of 7.125x106Da. Arabinose 35-44 RALBP1 associated Eps domain containing 2 Homo sapiens 0-5 28841174-4 2017 DRP1, with a molecular weight of 5695 Da, was composed of glucose, galactose and arabinose, whereas DRP2, with molecular weight of 8882 Da, was composed of rhamnose, galacturonic acid, glucose, galactose and arabinose. Arabinose 81-90 collapsin response mediator protein 1 Mus musculus 0-4 28344090-5 2017 The results show that the weight average molecular weight (Mw) of DCP-2 was 2 273Da with a narrow polydispersity index of 1.01, and it was a heteropolysaccharide and consisted of glucose, galactose, arabinose, rhamnose and mannose with a molar ratio of 3.20:2.54:1.69:1.58:1.00. Arabinose 199-208 decapping mRNA 2 Mus musculus 66-71 28785254-5 2017 The galactose permease, Gal2p, is a non-specific, endogenous monosaccharide transporter that has been shown to transport L-arabinose. Arabinose 121-132 galactose permease GAL2 Saccharomyces cerevisiae S288C 24-29 29171231-5 2017 The results showed that an anti-angiotensin converting enzyme oligosaccharide, GLP-1-1, was obtained from Trichosanthis Pericarpium based on activity tracking, whose average molecular weight was estimated to 1 367; mainly composed of arabinose, mannose, and glucose at a ratio of 0.2:4.3:10.0. Arabinose 234-243 angiotensin I converting enzyme Homo sapiens 27-61 29171231-5 2017 The results showed that an anti-angiotensin converting enzyme oligosaccharide, GLP-1-1, was obtained from Trichosanthis Pericarpium based on activity tracking, whose average molecular weight was estimated to 1 367; mainly composed of arabinose, mannose, and glucose at a ratio of 0.2:4.3:10.0. Arabinose 234-243 glucagon like peptide 1 receptor Homo sapiens 79-86 28981776-1 2017 The major plant sugar l-arabinose (l-Ara) has two different ring forms, l-arabinofuranose (l-Araf) and l-arabinopyranose (l-Arap). Arabinose 35-40 alpha-L-arabinofuranosidase 1 Arabidopsis thaliana 93-97 28981776-2 2017 Although l-Ara mainly appears in the form of alpha-l-Araf residues in cell wall components, such as pectic alpha-1,3:1,5-arabinan, arabinoxylan, and arabinogalactan-proteins (AGPs), lesser amounts of it can also be found as beta-l-Arap residues of AGPs. Arabinose 9-14 alpha-L-arabinofuranosidase 1 Arabidopsis thaliana 53-57 28433181-2 2017 The molecular weight of SPS2p showed only one molecular weight distribution (2.6x104Da) and the monosaccharide composition of SPS2p showed the presence of arabinose, mannose, glucose and galactose at the ratio of 1.31:1.00:3.59:1.59. Arabinose 155-164 selenophosphate synthetase 2 Homo sapiens 126-131 28785254-6 2017 However, Gal2p-mediated transport of L-arabinose occurs at a low efficiency. Arabinose 37-48 galactose permease GAL2 Saccharomyces cerevisiae S288C 9-14 28785254-7 2017 In this study, homologous modeling and L-arabinose docking were used to predict amino acids in Gal2p that are crucial for L-arabinose transport. Arabinose 39-50 galactose permease GAL2 Saccharomyces cerevisiae S288C 95-100 28785254-7 2017 In this study, homologous modeling and L-arabinose docking were used to predict amino acids in Gal2p that are crucial for L-arabinose transport. Arabinose 122-133 galactose permease GAL2 Saccharomyces cerevisiae S288C 95-100 28785254-9 2017 In the Gal2p transport-deficient chassis cells, the capacity for L-arabinose transport of the different Gal2p mutants was compared by testing growth rates using L-arabinose as the sole carbon source. Arabinose 65-76 galactose permease GAL2 Saccharomyces cerevisiae S288C 104-109 28515017-2 2017 FABP3 was shown to be involved in long chain polyunsaturated fatty acids (LCPUFA) uptake in human trophoblastic choriocarcinoma cells, BeWo as the uptake of arachidonic acid,20:4n-6 (ARA) was decreased in FABP3-knockdown BeWo cells. Arabinose 183-186 fatty acid binding protein 3 Homo sapiens 0-5 28325338-5 2017 PCS2 was composed of d-galactose, d-mannose, d-(+)-glucose, d-(+)-xylose, l-arabinose and l-rhamnose. Arabinose 74-85 dominant cataract 4 Mus musculus 0-4 28515017-5 2017 Among all these fatty acids tested, only ARA dose-dependently stimulated the expression of FABP3 protein in these cells after 24h incubation while other fatty acids had no such effect. Arabinose 41-44 fatty acid binding protein 3 Homo sapiens 91-96 28515017-10 2017 All these data indicate that FABP3 may in be part involved in ARA uptake in these cells and its expression may be regulated by ARA, insulin, LXR and the state of cellular differentiation. Arabinose 62-65 fatty acid binding protein 3 Homo sapiens 29-34 28515017-10 2017 All these data indicate that FABP3 may in be part involved in ARA uptake in these cells and its expression may be regulated by ARA, insulin, LXR and the state of cellular differentiation. Arabinose 62-65 insulin Homo sapiens 132-139 28117590-4 2017 In this study, structural characterization revealed that MC-2 has an average molecular weight of 9.83 kDa and is composed of arabinose (20.9%), mannose (4.5%), glucose (71.9%), and galactose (2.7%). Arabinose 125-134 melanocortin 5 receptor Homo sapiens 57-61 27888523-7 2017 The galactose: arabinose ratio of AG glycans was higher in GhGalT1 overexpression fibers, but was lower in GhGalT1-silenced lines, compared with that in the wild type. Arabinose 15-24 probable beta-1,3-galactosyltransferase 14 Gossypium hirsutum 59-66 27220955-2 2016 L-Ara occurs in pectic arabinan, rhamnogalacturonan II, arabinoxylan, arabinogalactan-protein (AGP), and extensin in the cell walls, as well as in glycosylated signaling peptides like CLAVATA3 and small glycoconjugates such as quercetin 3-O-arabinoside. Arabinose 0-5 CLAVATA3 Arabidopsis thaliana 184-192 27129881-7 2016 Monosaccharide composition analysis indicated that APS1 consisted of glucose only, and APS2 all consisted of arabinose. Arabinose 109-118 nudix hydrolase 10 Homo sapiens 87-91 27927976-0 2017 Metabolic Profiling Reveals Differences in Plasma Concentrations of Arabinose and Xylose after Consumption of Fiber-Rich Pasta and Wheat Bread with Differential Rates of Systemic Appearance of Exogenous Glucose in Healthy Men. Arabinose 68-77 solute carrier family 45 member 1 Homo sapiens 121-126 27927976-7 2017 RESULTS: Forty-two different postprandial metabolite profiles were identified, primarily representing pathways related to protein and energy metabolism, which were on average 8% and 7% lower after the men consumed pasta rather than bread, whereas concentrations of arabinose and xylose were 58% and 53% higher, respectively. Arabinose 265-274 solute carrier family 45 member 1 Homo sapiens 214-219 27927976-9 2017 The higher bioavailability of arabinose and xylose after pasta intake coincided with a lower rate of appearance of glucose and amino acids. Arabinose 30-39 solute carrier family 45 member 1 Homo sapiens 57-62 27871117-2 2017 SCP-80-I is composed mainly of arabinose, mannose, glucose, and galactose in a molar ratio of 0.369:0.824:10.759:0.333, and has a molecular mass of 18350 Da and beta-glycosides linkages in its molecular structure. Arabinose 31-40 cysteine-rich secretory protein 3 Rattus norvegicus 0-3 28005005-4 2016 Behavioral assays indicate that L-arabinose-generated memories require sugar receptor Gr43a, and calcium imaging and electrophysiological recordings indicate that L- and D-arabinose differentially activate Gr43a-expressing neurons. Arabinose 32-43 Gustatory receptor 43a Drosophila melanogaster 86-91 28005005-4 2016 Behavioral assays indicate that L-arabinose-generated memories require sugar receptor Gr43a, and calcium imaging and electrophysiological recordings indicate that L- and D-arabinose differentially activate Gr43a-expressing neurons. Arabinose 32-43 Gustatory receptor 43a Drosophila melanogaster 206-211 27377460-2 2016 BP-1 had an average molecular weight of about 6.7x104Da and was composed of glucose (Glc), xylose (Xyl), arabinose (Ara) and rhamnose (Rha) with a relative molar ratio of 8.82:1.92:1.50:1.00. Arabinose 105-114 BP1 Homo sapiens 0-4 27377460-2 2016 BP-1 had an average molecular weight of about 6.7x104Da and was composed of glucose (Glc), xylose (Xyl), arabinose (Ara) and rhamnose (Rha) with a relative molar ratio of 8.82:1.92:1.50:1.00. Arabinose 116-119 BP1 Homo sapiens 0-4 27161660-3 2016 Calystegines B2 (3) and B3 (4) were synthesized from d-xylose and l-arabinose derivatives respectively in 11 steps in excellent overall yields (27% and 19%). Arabinose 66-77 nucleophosmin 1 Homo sapiens 13-26 27145098-9 2016 The mutation is close to the substrate binding site and changes the Km value for arabinose from 80 mum in the wild type to 17 000 mum in ARA1-1. Arabinose 81-90 arabinose kinase Arabidopsis thaliana 137-141 27345527-2 2016 Physicochemical characterization indicated that POP1 had a relative molecular weight of 8.10 x 10(3) Da and consisted of rhamnose (5.74%), arabinose (12.58%), mannose (10.97%), glucose (64.96%), and galactose (6.55%). Arabinose 139-148 POP1 homolog, ribonuclease P/MRP subunit Homo sapiens 48-52 27337058-6 2016 SEP was a novel polysaccharide from Sepia esculenta ink with a unique primary structure mainly composed of GalN and Ara that accounted for almost half of all monosaccharides: their ratio was nearly one-to-one. Arabinose 116-119 epoxide hydrolase 2, cytoplasmic Mus musculus 0-3 28959541-7 2016 ARA and gamma-tocopherol strengthened the contaminant-induced response, ARA by contributing to an additive and synergistic induction of CYP1A, CYP3A and CPT2, and gamma-tocopherol by synergistically increasing ACOX1. Arabinose 0-3 cytochrome P450, family 1, subfamily A Salmo salar 136-141 26712695-3 2016 Monosaccharide component analysis indicated that MAP-1 was composed of Rha, Ara, Glu, Gal, and GalA in a molar ratio of 1.1:0.4:0.7:0.5:0.3. Arabinose 76-79 mannosidase processing 1 Mus musculus 49-54 25969440-8 2016 The in vitro expression of Tum was examined in BL after l-arabinose induction. Arabinose 56-67 collagen, type IV, alpha 3 Mus musculus 27-30 27209700-2 2016 ASPS was composed of arabinose (51.4%), glucose (24.5%), galactose (10.2%), xylose (5.7) and galacturonic acid (4.9%). Arabinose 21-30 casein kinase 1 delta Homo sapiens 0-4 28959541-7 2016 ARA and gamma-tocopherol strengthened the contaminant-induced response, ARA by contributing to an additive and synergistic induction of CYP1A, CYP3A and CPT2, and gamma-tocopherol by synergistically increasing ACOX1. Arabinose 0-3 cytochrome P450 3A27 Salmo salar 143-148 28959541-7 2016 ARA and gamma-tocopherol strengthened the contaminant-induced response, ARA by contributing to an additive and synergistic induction of CYP1A, CYP3A and CPT2, and gamma-tocopherol by synergistically increasing ACOX1. Arabinose 0-3 carnitine O-palmitoyltransferase 2, mitochondrial Salmo salar 153-157 28959541-7 2016 ARA and gamma-tocopherol strengthened the contaminant-induced response, ARA by contributing to an additive and synergistic induction of CYP1A, CYP3A and CPT2, and gamma-tocopherol by synergistically increasing ACOX1. Arabinose 0-3 peroxisomal acyl-coenzyme A oxidase 1 Salmo salar 210-215 26234927-2 2015 HYPOTHESIS: Brain 20-hydroxyeicosatetraenoic acid (20-HETE), converted by CYP4A from ARA, will be reduced in adult mice treated transiently and postnatally with fluoxetine. Arabinose 85-88 cytochrome P450, family 4, subfamily a, polypeptide 10 Mus musculus 74-79 26652604-6 2015 RESULTS: Following treatment with L-arabinose, metabolic syndrome rats had an obvious reduction in body weight, systolic blood pressure, diastolic blood pressure, fasting blood glucose, triglycerides, total cholesterol, serum insulin, TNF-alpha, and leptin. Arabinose 34-45 tumor necrosis factor Rattus norvegicus 235-244 26652604-7 2015 Further study showed that treatment with L-arabinose significantly increased the expression of mRNA for hepatic CPT-1alpha and PDK4, but the expression of mRNA for hepatic ACCalpha was reduced. Arabinose 41-52 carnitine palmitoyltransferase 1A Rattus norvegicus 112-122 26652604-7 2015 Further study showed that treatment with L-arabinose significantly increased the expression of mRNA for hepatic CPT-1alpha and PDK4, but the expression of mRNA for hepatic ACCalpha was reduced. Arabinose 41-52 pyruvate dehydrogenase kinase 4 Rattus norvegicus 127-131 26256325-4 2015 PRM1 (143.2 kDa), PRM3 (105.3 kDa) and PRM5 (162.1 kDa) were heteropolysaccharides because they were composed of arabinose, mannose, glucose and galactose. Arabinose 113-122 protamine 1 Homo sapiens 0-4 26256355-2 2015 CSP had a weight-average molecular weight of about 6.3 x 10(4)Da and was composed of glucose (Glc), galactose (Gal), rhamnose (Rha) and arabinose (Ara) with a relative molar ratio of 4.6:1.3:0.8:0.5. Arabinose 136-145 DnaJ heat shock protein family (Hsp40) member C5 Mus musculus 0-3 26256355-2 2015 CSP had a weight-average molecular weight of about 6.3 x 10(4)Da and was composed of glucose (Glc), galactose (Gal), rhamnose (Rha) and arabinose (Ara) with a relative molar ratio of 4.6:1.3:0.8:0.5. Arabinose 147-150 DnaJ heat shock protein family (Hsp40) member C5 Mus musculus 0-3 26129747-7 2015 Transport kinetics of S. cerevisiae Gal2p showed K(m) 371 mM and V(max) 341 nM/mg/min for L-arabinose, and K(m) 25 mM and V(max) 76 nM/mg/min for galactose. Arabinose 90-101 galactose permease GAL2 Saccharomyces cerevisiae S288C 36-41 26129747-8 2015 Due to the ability of Gal2p and these two newly characterized transporters to transport both L-arabinose and D-xylose, one scenario for the complete usage of biomass-derived pentose sugars would require only the low-affinity, high-throughput transporter Gal2p and one additional high-affinity general pentose transporter, rather than dedicated D-xylose or L-arabinose transporters. Arabinose 93-104 galactose permease GAL2 Saccharomyces cerevisiae S288C 22-27 26129747-8 2015 Due to the ability of Gal2p and these two newly characterized transporters to transport both L-arabinose and D-xylose, one scenario for the complete usage of biomass-derived pentose sugars would require only the low-affinity, high-throughput transporter Gal2p and one additional high-affinity general pentose transporter, rather than dedicated D-xylose or L-arabinose transporters. Arabinose 93-104 galactose permease GAL2 Saccharomyces cerevisiae S288C 254-259 25841015-6 2015 Determination of the kinetic properties of both transporters revealed that the Km values of LAT-1 and MtLAT-1 for l-arabinose were 58.12 +- 4.06 mM and 29.39 +- 3.60 mM, respectively, with corresponding Vmax values of 116.7 +- 3.0 mmol/h/g dry cell weight (DCW) and 10.29 +- 0.35 mmol/h/g DCW, respectively. Arabinose 114-125 dihydrolipoyllysine-residue acetyltransferase Saccharomyces cerevisiae S288C 92-97 26341899-0 2015 The Mediator complex subunits MED25/PFT1 and MED8 are required for transcriptional responses to changes in cell wall arabinose composition and glucose treatment in Arabidopsis thaliana. Arabinose 117-126 phytochrome and flowering time regulatory protein (PFT1) Arabidopsis thaliana 30-35 26341899-0 2015 The Mediator complex subunits MED25/PFT1 and MED8 are required for transcriptional responses to changes in cell wall arabinose composition and glucose treatment in Arabidopsis thaliana. Arabinose 117-126 phytochrome and flowering time regulatory protein (PFT1) Arabidopsis thaliana 36-40 26341899-0 2015 The Mediator complex subunits MED25/PFT1 and MED8 are required for transcriptional responses to changes in cell wall arabinose composition and glucose treatment in Arabidopsis thaliana. Arabinose 117-126 mediator subunit 8 Arabidopsis thaliana 45-49 26244338-5 2015 Structural and affinity analyses revealed that AccA recognizes an uncommon and specific motif, a pyranose-2-phosphate moiety which is present in both imported molecules via the L-arabinopyranose moiety in agrocinopine A and the D-glucopyranose moiety in agrocin 84. Arabinose 177-194 AccA Agrobacterium tumefaciens 47-51 25841015-8 2015 Moreover, LAT-1 and MtLAT-1 were expressed in the S. cerevisiae strain BSW2AP containing an l-arabinose metabolic pathway. Arabinose 92-103 dihydrolipoyllysine-residue acetyltransferase Saccharomyces cerevisiae S288C 10-15 25619971-6 2015 This compatible dual plasmid system contains an arabinose-inducible OGT expression vector with a pUC origin and an isopropyl beta-d-thiogalactopyranoside-inducible OGT target substrate expression vector bearing a p15A origin. Arabinose 48-57 O-linked N-acetylglucosamine (GlcNAc) transferase Homo sapiens 68-71 25536026-2 2015 PLP has a molecular weight of 1.15 x 10(6) Da, and a monosaccharide composition of xylose (Xyl), arabinose (Ara), glucuronic acid (GlcA), and galactose (Gal) in a molar ratio of 18.8:7.2:6.1:1. Arabinose 97-106 proteolipid protein 1 Homo sapiens 0-3 25536026-2 2015 PLP has a molecular weight of 1.15 x 10(6) Da, and a monosaccharide composition of xylose (Xyl), arabinose (Ara), glucuronic acid (GlcA), and galactose (Gal) in a molar ratio of 18.8:7.2:6.1:1. Arabinose 108-111 proteolipid protein 1 Homo sapiens 0-3 25400106-1 2015 In addition to a yet-to-be published study showing arabinose to have an inhibiting effect on maltase, in vitro studies have shown L-arabinose to exert an inhibiting effect on small-intestinal sucrase and maltase and the consumption of a sucrose-rich drink containing L-arabinose to exert positive effects on postprandial blood glucose, insulin and C-peptide responses in humans. Arabinose 130-141 insulin Homo sapiens 336-343 25400106-1 2015 In addition to a yet-to-be published study showing arabinose to have an inhibiting effect on maltase, in vitro studies have shown L-arabinose to exert an inhibiting effect on small-intestinal sucrase and maltase and the consumption of a sucrose-rich drink containing L-arabinose to exert positive effects on postprandial blood glucose, insulin and C-peptide responses in humans. Arabinose 130-141 insulin Homo sapiens 348-357 25298665-6 2014 Induction of iNOS and NO by LPS in RAW 264.7 cells was significantly inhibited by the extract, suggesting that the ARA extract inhibits NO production by suppressing iNOS expression. Arabinose 115-118 nitric oxide synthase 2, inducible Mus musculus 13-17 25965476-5 2015 Monosaccharide analysis showed that GPA1, GPA2 and GPA3 were all composed of Man, Rha, GlcA, GalA, Glc, Gal, Ara and Fuc, besides, GPA2 and GPA3 also contained Xyl. Arabinose 109-112 glycoprotein hormone subunit alpha 2 Homo sapiens 42-46 25236800-9 2014 Expression of the Rl AraDH dehydrogenase in S. cerevisiae, together with the galactose permease Gal2 for L-arabinose uptake, resulted in production of 18 g of L-arabonate per litre, at a rate of 248 mg of L-arabonate per litre per hour, with 86 % of the provided L-arabinose converted to L-arabonate. Arabinose 105-116 galactose permease GAL2 Saccharomyces cerevisiae S288C 96-100 25236800-9 2014 Expression of the Rl AraDH dehydrogenase in S. cerevisiae, together with the galactose permease Gal2 for L-arabinose uptake, resulted in production of 18 g of L-arabonate per litre, at a rate of 248 mg of L-arabonate per litre per hour, with 86 % of the provided L-arabinose converted to L-arabonate. Arabinose 263-274 galactose permease GAL2 Saccharomyces cerevisiae S288C 96-100 25298665-6 2014 Induction of iNOS and NO by LPS in RAW 264.7 cells was significantly inhibited by the extract, suggesting that the ARA extract inhibits NO production by suppressing iNOS expression. Arabinose 115-118 nitric oxide synthase 2, inducible Mus musculus 165-169 25298665-9 2014 CONCLUSION: These results suggest that the methanolic extract of ARA exerts significant antioxidant activities potentially via inhibiting free radicals and iNOS induction, thereby leading to the inhibition of osteoclastogenesis. Arabinose 65-68 nitric oxide synthase 2, inducible Mus musculus 156-160 24561586-0 2014 Effect of C-terminal protein tags on pentitol and L-arabinose transport by Ambrosiozyma monospora Lat1 and Lat2 transporters in Saccharomyces cerevisiae. Arabinose 50-61 dihydrolipoyllysine-residue acetyltransferase Saccharomyces cerevisiae S288C 98-102 24593998-4 2014 In this work, a minicircle production system was constructed that relies on the enzymatic activity of ParA resolvase, a recombinase that is expressed under the transcription control of the arabinose inducible expression system pBAD/AraC, and on Escherichia coli BWAA, a strain improved for arabinose uptake. Arabinose 189-198 recombinase Escherichia coli 120-131 24561586-4 2014 A. monospora LAT1 and LAT2 genes were cloned earlier by using their ability to improve the growth of genetically engineered Saccharomyces cerevisiae on l-arabinose. Arabinose 152-163 dihydrolipoyllysine-residue acetyltransferase Saccharomyces cerevisiae S288C 13-17 24561586-5 2014 However, the l-arabinose and pentitol transport activities of S. cerevisiae carrying LAT1 or LAT2 are only slightly greater than those of control strains. Arabinose 13-24 dihydrolipoyllysine-residue acetyltransferase Saccharomyces cerevisiae S288C 85-89 24561586-7 2014 Lat1-mCherry transported l-arabinose with high affinity (Km 0.03 mM) and l-arabitol and ribitol with very low affinity (Km >= 75 mM). Arabinose 25-36 dihydrolipoyllysine-residue acetyltransferase Saccharomyces cerevisiae S288C 0-4 24691064-4 2014 LPD, the molecular weight of which was lower than that of LPF, contained more protein, uronic acid, arabinose, galactose and xylose. Arabinose 100-109 acyl-CoA synthetase bubblegum family member 1 Homo sapiens 0-3 24472508-4 2014 And AEP-2 mainly contained Ara, Man, Gal, Glc and GalA. Arabinose 27-30 spermatogenesis associated 32 Homo sapiens 4-9 24274513-4 2014 HMP-1 and HMP-2 were mainly composed of arabinose, galactose, glucose and mannose with the molecular weight of 133 and 100 kDa, respectively. Arabinose 40-49 inner membrane mitochondrial protein Homo sapiens 0-3 23553356-10 2014 Isolates JN6, BP8, and MJ4 showed the highest ARA activity, ammonia excretion, and IAA production. Arabinose 46-49 BP8 Homo sapiens 14-17 24274513-4 2014 HMP-1 and HMP-2 were mainly composed of arabinose, galactose, glucose and mannose with the molecular weight of 133 and 100 kDa, respectively. Arabinose 40-49 inner membrane mitochondrial protein Homo sapiens 10-13 23042514-4 2013 The PLS2 model is able to predict concentrations of both major sugar components, like glucose and xylose, and minor sugars, such as arabinose and mannose, in biomass hydrolysates. Arabinose 132-141 lymphocyte cytosolic protein 1 Homo sapiens 4-8 24336744-3 2014 SGP-2 is mainly composed of glucose, galactose, mannose, arabinose and galacturonic acid in a molar ratio of 12.19 : 8.68 : 6.03 : 1.00 : 15.24. Arabinose 57-66 clusterin Homo sapiens 0-5 24127984-6 2014 These benefits were diminished by the pretreatment of obese rats with AMPK inhibitor Ara. Arabinose 85-88 protein kinase AMP-activated catalytic subunit alpha 2 Rattus norvegicus 70-74 23936499-11 2013 Together, these results show that an intact IRR is required for the effective treatment of NP with either ketamine or ARA 290, but is not involved in ketamine"s analgesic and side effects. Arabinose 118-121 insulin receptor-related receptor Mus musculus 44-47 23315785-3 2013 The stereochemical promiscuity of this aldolase towards these enantiomeric aldol substrates confirms that this organism employs a metabolically promiscuous pathway to catabolise the C5-sugars D-xylose and L-arabinose. Arabinose 205-216 class I fructose-bisphosphate aldolase Saccharolobus solfataricus 39-47 23256149-2 2013 The physiological importance of this modification was highlighted by the finding that CLAVATA3 (CLV3), a key peptide signal for regulating the fate of stem cells in the shoot apical meristem in Arabidopsis, contains three l-arabinose residues linked via linear beta-1,2-linkages. Arabinose 222-233 CLAVATA3 Arabidopsis thaliana 86-94 23256149-2 2013 The physiological importance of this modification was highlighted by the finding that CLAVATA3 (CLV3), a key peptide signal for regulating the fate of stem cells in the shoot apical meristem in Arabidopsis, contains three l-arabinose residues linked via linear beta-1,2-linkages. Arabinose 222-233 CLAVATA3 Arabidopsis thaliana 96-100 23256149-6 2013 Comparison of mono-, di- and triarabinosylated CLV3 glycopeptides revealed that the biological activity increased progressively as the arabinose chain length increased. Arabinose 135-144 CLAVATA3 Arabidopsis thaliana 47-51 23157301-8 2012 IFN-alpha8 expression was optimized with respect to L-arabinose concentration, temperature, and time of induction in shake flask cultures to maximize the yield of soluble IFN-alpha8. Arabinose 52-63 interferon alpha 8 Homo sapiens 0-10 22728640-4 2012 IBP consisted of mannose, glucuronic acid, rhamnose, galacturonic acid, glucose, galactose, arabinose with a molar ratio of 4.1:1:1.4:2.7:14.6:6.3:7.9. Arabinose 92-101 trafficking protein particle complex 9 Mus musculus 0-3 23934307-5 2013 Chemically synthesized CLE-RS glycopeptides cause significant suppression of nodulation and directly bind to HAR1 in an arabinose-chain and sequence-dependent manner. Arabinose 120-129 CM0216.560.nc Lotus japonicus 109-113 22944432-2 2012 High-performance liquid chromatography (HPLC) identified that PTPa and PTPb was composed of Ara, Glc, Gal, Man and GlcUA in the proportion of 2.4:1.2:0.6:0.4:1.1 and 2.1:1.7:0.5:0.6:1.7, respectively. Arabinose 92-95 protein phosphatase 2 phosphatase activator Homo sapiens 62-66 22944432-2 2012 High-performance liquid chromatography (HPLC) identified that PTPa and PTPb was composed of Ara, Glc, Gal, Man and GlcUA in the proportion of 2.4:1.2:0.6:0.4:1.1 and 2.1:1.7:0.5:0.6:1.7, respectively. Arabinose 92-95 protein tyrosine phosphatase receptor type B Homo sapiens 71-75 22245359-2 2012 We found in this study that arabinose significantly inhibited tyrosinase, and this was accompanied by conformational changes in enzyme structure. Arabinose 28-37 tyrosinase Homo sapiens 62-72 22978376-6 2012 ARA also promoted glucose transport by increasing the glucose transporter 4 (GLUT-4), phosphatidylinositol 3-kinase (PI3K) and insulin receptor substrates-1 (IRS-1) levels. Arabinose 0-3 solute carrier family 2 (facilitated glucose transporter), member 4 Mus musculus 54-75 22978376-6 2012 ARA also promoted glucose transport by increasing the glucose transporter 4 (GLUT-4), phosphatidylinositol 3-kinase (PI3K) and insulin receptor substrates-1 (IRS-1) levels. Arabinose 0-3 solute carrier family 2 (facilitated glucose transporter), member 4 Mus musculus 77-83 22978376-6 2012 ARA also promoted glucose transport by increasing the glucose transporter 4 (GLUT-4), phosphatidylinositol 3-kinase (PI3K) and insulin receptor substrates-1 (IRS-1) levels. Arabinose 0-3 insulin receptor substrate 1 Mus musculus 127-156 22978376-6 2012 ARA also promoted glucose transport by increasing the glucose transporter 4 (GLUT-4), phosphatidylinositol 3-kinase (PI3K) and insulin receptor substrates-1 (IRS-1) levels. Arabinose 0-3 insulin receptor substrate 1 Mus musculus 158-163 22978376-7 2012 CONCLUSION: Our results suggest that ARA extract may be an attractive therapeutic agent for managing T2D via promoting the differentiation of adipocytes with the upregulation of PPARgamma levels and the activation of the insulin signaling pathway. Arabinose 37-40 peroxisome proliferator activated receptor gamma Mus musculus 178-187 24750884-4 2012 GP-C1 consisted of Gal, Ara, Man, Rha, Glc, and GlcA in the proportions of 2.1:1.0:0.3:0.5:0.4:0.9. Arabinose 24-27 glypican 1 Homo sapiens 0-5 22245359-5 2012 Measurements of intrinsic and ANS-binding fluorescence showed that arabinose induced tyrosinase to unfold and expose inner hydrophobic regions. Arabinose 67-76 tyrosinase Homo sapiens 85-95 22245359-6 2012 We simulated the docking between tyrosinase and arabinose (binding energies were -26.28 kcal/mol for Dock6.3 and -2.02 kcal/mol for AutoDock4.2) and results suggested that arabinose interacts mostly with His61, Asn260, and Met280. Arabinose 48-57 tyrosinase Homo sapiens 33-43 22245359-6 2012 We simulated the docking between tyrosinase and arabinose (binding energies were -26.28 kcal/mol for Dock6.3 and -2.02 kcal/mol for AutoDock4.2) and results suggested that arabinose interacts mostly with His61, Asn260, and Met280. Arabinose 48-57 dedicator of cytokinesis 6 Homo sapiens 101-106 22245359-6 2012 We simulated the docking between tyrosinase and arabinose (binding energies were -26.28 kcal/mol for Dock6.3 and -2.02 kcal/mol for AutoDock4.2) and results suggested that arabinose interacts mostly with His61, Asn260, and Met280. Arabinose 172-181 tyrosinase Homo sapiens 33-43 22245359-6 2012 We simulated the docking between tyrosinase and arabinose (binding energies were -26.28 kcal/mol for Dock6.3 and -2.02 kcal/mol for AutoDock4.2) and results suggested that arabinose interacts mostly with His61, Asn260, and Met280. Arabinose 172-181 dedicator of cytokinesis 6 Homo sapiens 101-106 22245359-7 2012 The present strategy of predicting tyrosinase inhibition by simulation of docking by hydroxyl groups may prove useful in screening for potential tyrosinase inhibitors, as shown here for arabinose. Arabinose 186-195 tyrosinase Homo sapiens 35-45 22245359-7 2012 The present strategy of predicting tyrosinase inhibition by simulation of docking by hydroxyl groups may prove useful in screening for potential tyrosinase inhibitors, as shown here for arabinose. Arabinose 186-195 tyrosinase Homo sapiens 145-155 21980057-7 2011 Omega-3 fatty acids decreased by nearly one half relative to omega-6 fatty acids in PTB knockdown cells compared with controls, with a particularly strong decrease in eicosapentaenoic acid (EPA) concentration and its ratio to arachidonic acid (ARA). Arabinose 244-247 polypyrimidine tract binding protein 1 Homo sapiens 84-87 22916179-6 2012 Instead, FRB1 affects the abundance of galactose- and arabinose-containing oligosaccharides in the Golgi. Arabinose 54-63 O-fucosyltransferase family protein Arabidopsis thaliana 9-13 21871930-4 2011 The growth of Salmonella MMP10 harboring pMMP55 was dependent on the presence of arabinose. Arabinose 81-90 matrix metallopeptidase 10 Mus musculus 25-30 21677059-10 2011 In the human studies, supplementation with 4% l-arabinose produced an 11% lower glucose peak, a 33% lower and delayed insulin peak, a 23% reduction in the incremental area under the curve (iAUC) for insulin, a 23% lower and delayed C-peptide peak, a 9% reduction in the iAUC for C-peptide, a 53% increase in the iAUC for glucagon-like peptide-1 (GLP-1), and a 28% reduction in the iAUC for glucose-dependent insulinotropic polypeptide. Arabinose 46-57 insulin Homo sapiens 118-125 21992610-7 2011 In contrast, the S. cerevisiae D-galactose transporter, Gal2, mediated uptake of both L-arabinose and D-glucose, especially at high concentrations. Arabinose 86-97 galactose permease GAL2 Saccharomyces cerevisiae S288C 56-60 21838223-2 2011 Robust levels of selectivity for the equatorial OH group of cis-1,2-diol motifs are demonstrated in reactions of seven acceptors derived from galactose, mannose, fucose, and arabinose using a variety of glycosyl halide donors. Arabinose 174-183 suppressor of cytokine signaling 1 Homo sapiens 60-65 21677059-12 2011 CONCLUSIONS: l-Arabinose inhibits sucrase activity from Caco-2 cells; 4% l-arabinose in sucrose beverages reduces postprandial glucose, insulin, and C-peptide responses and enhances the GLP-1 response in humans without gastrointestinal adverse effects. Arabinose 73-84 insulin Homo sapiens 136-143 21677059-10 2011 In the human studies, supplementation with 4% l-arabinose produced an 11% lower glucose peak, a 33% lower and delayed insulin peak, a 23% reduction in the incremental area under the curve (iAUC) for insulin, a 23% lower and delayed C-peptide peak, a 9% reduction in the iAUC for C-peptide, a 53% increase in the iAUC for glucagon-like peptide-1 (GLP-1), and a 28% reduction in the iAUC for glucose-dependent insulinotropic polypeptide. Arabinose 46-57 insulin Homo sapiens 199-206 21677059-12 2011 CONCLUSIONS: l-Arabinose inhibits sucrase activity from Caco-2 cells; 4% l-arabinose in sucrose beverages reduces postprandial glucose, insulin, and C-peptide responses and enhances the GLP-1 response in humans without gastrointestinal adverse effects. Arabinose 73-84 insulin Homo sapiens 149-158 21677059-10 2011 In the human studies, supplementation with 4% l-arabinose produced an 11% lower glucose peak, a 33% lower and delayed insulin peak, a 23% reduction in the incremental area under the curve (iAUC) for insulin, a 23% lower and delayed C-peptide peak, a 9% reduction in the iAUC for C-peptide, a 53% increase in the iAUC for glucagon-like peptide-1 (GLP-1), and a 28% reduction in the iAUC for glucose-dependent insulinotropic polypeptide. Arabinose 46-57 insulin Homo sapiens 232-241 21677059-10 2011 In the human studies, supplementation with 4% l-arabinose produced an 11% lower glucose peak, a 33% lower and delayed insulin peak, a 23% reduction in the incremental area under the curve (iAUC) for insulin, a 23% lower and delayed C-peptide peak, a 9% reduction in the iAUC for C-peptide, a 53% increase in the iAUC for glucagon-like peptide-1 (GLP-1), and a 28% reduction in the iAUC for glucose-dependent insulinotropic polypeptide. Arabinose 46-57 insulin Homo sapiens 279-288 21677059-12 2011 CONCLUSIONS: l-Arabinose inhibits sucrase activity from Caco-2 cells; 4% l-arabinose in sucrose beverages reduces postprandial glucose, insulin, and C-peptide responses and enhances the GLP-1 response in humans without gastrointestinal adverse effects. Arabinose 73-84 glucagon Homo sapiens 186-191 21677059-10 2011 In the human studies, supplementation with 4% l-arabinose produced an 11% lower glucose peak, a 33% lower and delayed insulin peak, a 23% reduction in the incremental area under the curve (iAUC) for insulin, a 23% lower and delayed C-peptide peak, a 9% reduction in the iAUC for C-peptide, a 53% increase in the iAUC for glucagon-like peptide-1 (GLP-1), and a 28% reduction in the iAUC for glucose-dependent insulinotropic polypeptide. Arabinose 46-57 glucagon Homo sapiens 321-344 21677059-10 2011 In the human studies, supplementation with 4% l-arabinose produced an 11% lower glucose peak, a 33% lower and delayed insulin peak, a 23% reduction in the incremental area under the curve (iAUC) for insulin, a 23% lower and delayed C-peptide peak, a 9% reduction in the iAUC for C-peptide, a 53% increase in the iAUC for glucagon-like peptide-1 (GLP-1), and a 28% reduction in the iAUC for glucose-dependent insulinotropic polypeptide. Arabinose 46-57 glucagon Homo sapiens 346-351 21677059-10 2011 In the human studies, supplementation with 4% l-arabinose produced an 11% lower glucose peak, a 33% lower and delayed insulin peak, a 23% reduction in the incremental area under the curve (iAUC) for insulin, a 23% lower and delayed C-peptide peak, a 9% reduction in the iAUC for C-peptide, a 53% increase in the iAUC for glucagon-like peptide-1 (GLP-1), and a 28% reduction in the iAUC for glucose-dependent insulinotropic polypeptide. Arabinose 46-57 gastric inhibitory polypeptide Homo sapiens 390-434 21904461-12 2011 L-arabinose mildly inhibited sucrase activity, but hardly inhibited the activity of maltase, palatinase, trehalase and lactase in humans and rats. Arabinose 0-11 trehalase Homo sapiens 105-114 25187138-9 2011 The optimal concentration of L-arabinose required for induction of the groES/groEL chaperone set was determined to be 1.0 mM and relative binding activity was 3.5 times higher compared with that of no induction with L-arabinose. Arabinose 29-40 chaperonin GroES Escherichia coli 71-76 25187138-9 2011 The optimal concentration of L-arabinose required for induction of the groES/groEL chaperone set was determined to be 1.0 mM and relative binding activity was 3.5 times higher compared with that of no induction with L-arabinose. Arabinose 29-40 GroEL Escherichia coli 77-82 25187138-9 2011 The optimal concentration of L-arabinose required for induction of the groES/groEL chaperone set was determined to be 1.0 mM and relative binding activity was 3.5 times higher compared with that of no induction with L-arabinose. Arabinose 216-227 chaperonin GroES Escherichia coli 71-76 21574785-8 2011 Compound C or Ara, administered along with thujone in palmitate-treated muscle, only partly blunted palmitate oxidation recovery despite inhibiting AMPK phosphorylation (-22%), although ACC2 phosphorylation remained upregulated (+33%). Arabinose 14-17 protein kinase AMP-activated catalytic subunit alpha 2 Homo sapiens 148-152 25187138-9 2011 The optimal concentration of L-arabinose required for induction of the groES/groEL chaperone set was determined to be 1.0 mM and relative binding activity was 3.5 times higher compared with that of no induction with L-arabinose. Arabinose 216-227 GroEL Escherichia coli 77-82 25187138-10 2011 In addition, soluble anti-BNP scFv was increased from 11.5 to 31.4 mug/ml with optimized inducer concentration (1.0 mM L-arabinose) for the coexpression of the groES/groEL chaperones. Arabinose 119-130 chaperonin GroES Escherichia coli 160-165 25187138-10 2011 In addition, soluble anti-BNP scFv was increased from 11.5 to 31.4 mug/ml with optimized inducer concentration (1.0 mM L-arabinose) for the coexpression of the groES/groEL chaperones. Arabinose 119-130 GroEL Escherichia coli 166-171 21478444-9 2011 Examination of cell wall polysaccharide preparations from RGP1 and RGP2 knockout mutants showed a significant reduction in total L-Ara content (12-31%) compared with wild-type plants. Arabinose 129-134 reversibly glycosylated polypeptide 1 Arabidopsis thaliana 58-62 21478444-9 2011 Examination of cell wall polysaccharide preparations from RGP1 and RGP2 knockout mutants showed a significant reduction in total L-Ara content (12-31%) compared with wild-type plants. Arabinose 129-134 reversibly glycosylated polypeptide 2 Arabidopsis thaliana 67-71 21478444-10 2011 Concomitant downregulation of RGP1 and RGP2 expression results in plants almost completely deficient in cell wall-derived L-Ara and exhibiting severe developmental defects. Arabinose 122-127 reversibly glycosylated polypeptide 1 Arabidopsis thaliana 30-34 21478444-10 2011 Concomitant downregulation of RGP1 and RGP2 expression results in plants almost completely deficient in cell wall-derived L-Ara and exhibiting severe developmental defects. Arabinose 122-127 reversibly glycosylated polypeptide 2 Arabidopsis thaliana 39-43 21134969-5 2011 We recently developed an alternative strategy, a regulated delayed antigen synthesis (RDAS) system, in which the LacI-repressible P(trc) promoter controls antigen gene expression by adding arabinose. Arabinose 189-198 tissue factor pathway inhibitor Mus musculus 113-117 21904461-12 2011 L-arabinose mildly inhibited sucrase activity, but hardly inhibited the activity of maltase, palatinase, trehalase and lactase in humans and rats. Arabinose 0-11 lactase Homo sapiens 119-126 20573988-8 2010 Inhibition of AMPK phosphorylation with adenine 9-beta-d-arabinofuranoside (Ara) (2.5 mM) or compound C (50 muM) inhibited the thujone-induced improvement in insulin-stimulated glucose transport, GLUT4 translocation, and AS160 phosphorylation. Arabinose 76-79 insulin Homo sapiens 158-165 20816840-5 2010 Elevated intracellular concentrations of pentose-phosphate-pathway intermediates and upregulation of TKL2 and YGR043c (encoding transketolase and transaldolase isoenzymes) suggested an involvement of these genes in flux-controlling reactions in arabinose fermentation. Arabinose 245-254 transketolase TKL2 Saccharomyces cerevisiae S288C 101-105 20573988-8 2010 Inhibition of AMPK phosphorylation with adenine 9-beta-d-arabinofuranoside (Ara) (2.5 mM) or compound C (50 muM) inhibited the thujone-induced improvement in insulin-stimulated glucose transport, GLUT4 translocation, and AS160 phosphorylation. Arabinose 76-79 solute carrier family 2 member 4 Homo sapiens 196-201 20573988-8 2010 Inhibition of AMPK phosphorylation with adenine 9-beta-d-arabinofuranoside (Ara) (2.5 mM) or compound C (50 muM) inhibited the thujone-induced improvement in insulin-stimulated glucose transport, GLUT4 translocation, and AS160 phosphorylation. Arabinose 76-79 TBC1 domain family member 4 Homo sapiens 221-226 20714287-4 2010 It was found that polysaccharide P32 consisted of rhamnose, arabinose, xylose, mannose, glucose and galactose in a molar ratio of 3.46:49.32:58.91:0.43:2.64: 3.11, respectively. Arabinose 60-69 tubulin polyglutamylase complex subunit 1 Mus musculus 33-36 20171913-1 2010 L-arabinitol 4-dehydrogenase (LAD1; EC 1.1.1.12) is an enzyme in the L-arabinose catabolic pathway of fungi that catalyzes the conversion of L-arabinitol into L-xylulose. Arabinose 69-80 ladinin 1 Homo sapiens 30-34 20828009-8 2010 Monosaccharide analysis by GC-MS revealed that TPS1 and TPS2 were composed of arabinose, galactose, glucose, rhamnose, xylose and mannose with molar ratios of 24.2 : 23.6 : 5.9 : 3.2 : 1.8 : 1.1 and 19.3 : 26.9 : 3.2 : 2.7 : 1.3 : 5.5, respectively. Arabinose 78-87 alpha,alpha-trehalose-phosphate synthase (UDP-forming) TPS1 Saccharomyces cerevisiae S288C 47-51 20828009-8 2010 Monosaccharide analysis by GC-MS revealed that TPS1 and TPS2 were composed of arabinose, galactose, glucose, rhamnose, xylose and mannose with molar ratios of 24.2 : 23.6 : 5.9 : 3.2 : 1.8 : 1.1 and 19.3 : 26.9 : 3.2 : 2.7 : 1.3 : 5.5, respectively. Arabinose 78-87 trehalose-phosphatase TPS2 Saccharomyces cerevisiae S288C 56-60 19727704-7 2010 Molecular dynamics simulation studies of the enzyme with the natural substrate, L-arabinose, and an analogue, D-galactose, shed light on the unique substrate specificity displayed by B. subtilis L-AI only towards L-arabinose. Arabinose 80-91 L-arabinose isomerase Bacillus subtilis subsp. subtilis str. 168 195-199 20363856-7 2010 The epitopes recognized by many of the mAbs in the toolkit, particularly those recognizing arabinose- and/or galactose-containing structures, are present on more than one glycan class, consistent with the known structural diversity and complexity of plant cell wall glycans. Arabinose 91-100 DEAD box helicase 41 Mus musculus 39-43 20226439-5 2010 Their counterparts present in the AXL and AXC fractions exhibited higher (0.60 and 0.75) arabinose-to-xylose ratios (Ara/Xyl) and represented 27% and 32% of the isolated AXs, respectively. Arabinose 89-98 AXL receptor tyrosine kinase Homo sapiens 34-37 19727704-7 2010 Molecular dynamics simulation studies of the enzyme with the natural substrate, L-arabinose, and an analogue, D-galactose, shed light on the unique substrate specificity displayed by B. subtilis L-AI only towards L-arabinose. Arabinose 213-224 L-arabinose isomerase Bacillus subtilis subsp. subtilis str. 168 195-199 19836729-4 2009 Low concentrations of enzyme failed to influence the sugar composition of intracellular arabinogalactan, whereas high concentrations were shown to decrease the amount of arabinose residues in AG1 and to cause galactan formation. Arabinose 170-179 NBPF member 10 Homo sapiens 192-195 20491645-3 2010 The sulfated monosaccharide units with the highest potential for anticoagulant activity should have two sulfate groups and a glycosidic linkage on the pyranose ring with C-2, C-3 and C-4 in 2S, 3R, 4R or 2R, 3S, 4S configurations for galactose, fucose and arabinose and 2S, 3S, 4R, for rhamnose. Arabinose 256-265 complement C4A (Rodgers blood group) Homo sapiens 183-186 19824891-4 2009 The glucose, ribose, arabinose, xylose, and fucose derivatives showed excellent CA VI inhibitory activity, with K(i)s in the range of 0.56-5.1 nm, whereas the least active derivatives, incorporating gallactose, mannose, and rhamnose scaffolds showed inhibition constants in the range of 10.1-34.1 nm. Arabinose 21-30 carbonic anhydrase 6 Homo sapiens 80-85 18423222-1 2008 Astrocytes respond to agents leading to progressively greater increases in the intracellular concentration of Ca(2+) ([Ca(2+)](i)) with a linear release of arachidonic acid (ARA), due to activation of cytosolic phospholipase A(2), and with a bell-shaped curve of nitric oxide (NO) release, due to Ca(2+)-dependent activation/inhibition of neuronal NO synthase (nNOS). Arabinose 174-177 nitric oxide synthase 1 Homo sapiens 361-365 19799786-11 2009 IL-6 was elevated in ATA-positive and ARA-positive patients, but not in ACA-positive patients. Arabinose 38-41 interleukin 6 Homo sapiens 0-4 20395685-1 2009 AIMS: The FADS1/FADS2 gene cluster encodes Delta-5 and Delta-6 desaturase, rate-limiting enzymes in metabolism of linoleic (LA) to arachidonic (ARA) and alpha-linolenic to eicosapentaenoic and docosahexaenoic acid (DHA). Arabinose 144-147 fatty acid desaturase 1 Homo sapiens 10-15 20395685-1 2009 AIMS: The FADS1/FADS2 gene cluster encodes Delta-5 and Delta-6 desaturase, rate-limiting enzymes in metabolism of linoleic (LA) to arachidonic (ARA) and alpha-linolenic to eicosapentaenoic and docosahexaenoic acid (DHA). Arabinose 144-147 fatty acid desaturase 2 Homo sapiens 16-21 20395685-1 2009 AIMS: The FADS1/FADS2 gene cluster encodes Delta-5 and Delta-6 desaturase, rate-limiting enzymes in metabolism of linoleic (LA) to arachidonic (ARA) and alpha-linolenic to eicosapentaenoic and docosahexaenoic acid (DHA). Arabinose 144-147 fatty acid desaturase 2 Homo sapiens 43-73 26783166-6 2009 The most significant increase in target gene expression was observed in the presence of arabinoxylan for the xynD gene, while xylose and arabinose had a weaker effect on xynD expression. Arabinose 137-146 family 43 glycosylhydrolase Bifidobacterium longum NCC2705 170-174 19540195-2 2009 Here we present an arabinose-derived bicyclic compound displaying selective cytotoxicity in human colorectal cancer cells expressing K-Ras(G13D), that shows high intrinsic nucleotide exchange rate. Arabinose 19-28 KRAS proto-oncogene, GTPase Homo sapiens 133-138 18572963-1 2008 Rye arabinoxylan, with an initial arabinose to xylose (Ara/Xyl) ratio of 0.50, was enzymatically modified with alpha-L-arabinofuranosidase. Arabinose 34-43 ATP binding cassette subfamily C member 6 Homo sapiens 55-58 17666049-1 2007 Addition of bacterial lipopolysaccharides (LPS) and interferon-gamma (IFN-gamma) to rat astrocytes in primary culture promotes an early release of arachidonic acid (ARA) associated with an immediate inhibition of neuronal nitric oxide synthase (nNOS). Arabinose 165-168 interferon gamma Rattus norvegicus 52-68 17641823-1 2007 Long-time equilibrium molecular dynamics simulations were performed to study the passage of a substrate, L: -arabinose, through nanopores of orthorhombic hen egg white lysozyme crystals. Arabinose 105-118 lysozyme Homo sapiens 168-176 17666049-1 2007 Addition of bacterial lipopolysaccharides (LPS) and interferon-gamma (IFN-gamma) to rat astrocytes in primary culture promotes an early release of arachidonic acid (ARA) associated with an immediate inhibition of neuronal nitric oxide synthase (nNOS). Arabinose 165-168 interferon gamma Rattus norvegicus 70-79 17666049-1 2007 Addition of bacterial lipopolysaccharides (LPS) and interferon-gamma (IFN-gamma) to rat astrocytes in primary culture promotes an early release of arachidonic acid (ARA) associated with an immediate inhibition of neuronal nitric oxide synthase (nNOS). Arabinose 165-168 nitric oxide synthase 1 Rattus norvegicus 213-243 17666049-1 2007 Addition of bacterial lipopolysaccharides (LPS) and interferon-gamma (IFN-gamma) to rat astrocytes in primary culture promotes an early release of arachidonic acid (ARA) associated with an immediate inhibition of neuronal nitric oxide synthase (nNOS). Arabinose 165-168 nitric oxide synthase 1 Rattus norvegicus 245-249 18074842-7 2007 Gel filtration chromatography showed that SHP composed of furanopolysaccharides, xylose, galactose, arabinose, glucose, rhamnose and fructose. Arabinose 100-109 nuclear receptor subfamily 0 group B member 2 Homo sapiens 42-45 17714480-6 2007 Bioassays of sonicated filtrates derived from the various arabinose-induced para-SEP constructs showed that only when sepA, sepB and sepC were coexpressed were amber disease symptoms observed in grass grub larvae. Arabinose 58-67 sepA Serratia entomophila 118-122 17714480-6 2007 Bioassays of sonicated filtrates derived from the various arabinose-induced para-SEP constructs showed that only when sepA, sepB and sepC were coexpressed were amber disease symptoms observed in grass grub larvae. Arabinose 58-67 sepB Serratia entomophila 124-128 17714480-6 2007 Bioassays of sonicated filtrates derived from the various arabinose-induced para-SEP constructs showed that only when sepA, sepB and sepC were coexpressed were amber disease symptoms observed in grass grub larvae. Arabinose 58-67 sepC Serratia entomophila 133-137 17609757-1 2007 The synthesis of a variety of arabinose derivatives that have been modified at C-5 was achieved from d-arabinose. Arabinose 30-39 complement C5 Homo sapiens 79-82 17401635-0 2007 Molecular characterization of two Arabidopsis thaliana glycosyltransferase mutants, rra1 and rra2, which have a reduced residual arabinose content in a polymer tightly associated with the cellulosic wall residue. Arabinose 129-138 Nucleotide-diphospho-sugar transferase family protein Arabidopsis thaliana 84-88 17401635-0 2007 Molecular characterization of two Arabidopsis thaliana glycosyltransferase mutants, rra1 and rra2, which have a reduced residual arabinose content in a polymer tightly associated with the cellulosic wall residue. Arabinose 129-138 Nucleotide-diphospho-sugar transferase family protein Arabidopsis thaliana 93-97 17587672-2 2007 CPE, crude polysaccharide extract isolated from the rhizome of C. xanthorrhiza using 0.1 N NaOH, consisted of arabinose (18.69%), galactose (14.0%), glucose (50.67%), mannose (12.97%), rhamnose (2.73%), and xylose (0.94%), with an average molecular weight of 33,000 Da. Arabinose 110-119 carboxypeptidase E Mus musculus 0-3 16129482-5 2005 The neutral polysaccharide (ASP1) was rich in glucose, galactose, and arabinose suggesting a mixture of glucan and arabinogalactan. Arabinose 70-79 audiogenic seizure prone 1 Mus musculus 28-32 16831850-8 2006 It was found that alpha-L-arabinofuranosidase activity in a cell-wall protein fraction prepared from transgenic Arabidopsis plants with enhanced expression of RsAraf1 was significantly higher than that in a wild-type protein fraction; the crude enzyme preparation released L-arabinose from radish AGPs as well as alpha-(1-->5)-arabinan and arabinoxylan. Arabinose 273-284 alpha-L-arabinofuranosidase 1 Arabidopsis thaliana 18-45 16263905-5 2005 Compared with the wt, qua1-1 calli cell walls contained more arabinose (23.6 versus 21.6 mol%), rhamnose (3.1 versus 2.7 mol%), and fucose (1.4 versus 1.2 mol%) and less uronic acid (24.2 versus 27.6 mol%), and they were less methyl-esterified (DM: 22.9% versus 30.3%). Arabinose 61-70 Nucleotide-diphospho-sugar transferases superfamily protein Arabidopsis thaliana 22-26 16263905-6 2005 When sequential pectin extraction of calli cell walls was performed, qua1-1 water-soluble and chelator-soluble extracts contained more arabinose and less uronic acid than wt. Arabinose 135-144 Nucleotide-diphospho-sugar transferases superfamily protein Arabidopsis thaliana 69-75 16336567-5 2005 Because angiotensin II is also generated from angiotensin I by enzymes other than ACE, ARA would provide a more effective blockade of angiotensin II; however, ACE inhibition increases plasma levels of substances such as bradykinin and N-acetyl-seryl-aspartyl-lysyl-proline, which have strong antifibrotic properties. Arabinose 87-90 angiotensinogen Homo sapiens 8-22 16336567-5 2005 Because angiotensin II is also generated from angiotensin I by enzymes other than ACE, ARA would provide a more effective blockade of angiotensin II; however, ACE inhibition increases plasma levels of substances such as bradykinin and N-acetyl-seryl-aspartyl-lysyl-proline, which have strong antifibrotic properties. Arabinose 87-90 angiotensinogen Homo sapiens 8-21 16336567-5 2005 Because angiotensin II is also generated from angiotensin I by enzymes other than ACE, ARA would provide a more effective blockade of angiotensin II; however, ACE inhibition increases plasma levels of substances such as bradykinin and N-acetyl-seryl-aspartyl-lysyl-proline, which have strong antifibrotic properties. Arabinose 87-90 angiotensinogen Homo sapiens 134-148 16209607-5 2005 The C-2 epimer of aceric acid was also synthesized using thiazole addition chemistry, starting from L-arabinose. Arabinose 100-111 complement C2 Homo sapiens 4-7 17409097-4 2007 Furthermore, A23187/arachidonic acid (ArA)-induced caspase-dependent death was significantly suppressed by the treatment of several serine protease inhibitors including 4-(2-aminoethyl)benzenesulfonylfluoride and l-1-chloro-3-(4-tosylamido)-4-phenyl-2-butanone but not the overexpression of anti-apoptotic Bcl-2 family of proteins or the inhibition of mitochondrial membrane permeability transition. Arabinose 38-41 complement component 1, s subcomponent 1 Mus musculus 132-147 17409097-4 2007 Furthermore, A23187/arachidonic acid (ArA)-induced caspase-dependent death was significantly suppressed by the treatment of several serine protease inhibitors including 4-(2-aminoethyl)benzenesulfonylfluoride and l-1-chloro-3-(4-tosylamido)-4-phenyl-2-butanone but not the overexpression of anti-apoptotic Bcl-2 family of proteins or the inhibition of mitochondrial membrane permeability transition. Arabinose 38-41 B cell leukemia/lymphoma 2 Mus musculus 306-311 17341835-4 2007 Recombinant AtUSP expressed in Escherichia coli exhibited broad specificity toward monosaccharide 1-phosphates, resulting in the formation of various UDP-sugars such as UDP-glucose, -galactose, -glucuronic acid, -xylose and -L-arabinose. Arabinose 225-236 UDP-sugar pyrophosphorylase Arabidopsis thaliana 12-17 16798843-4 2006 XYL3 released L-arabinose from (1-->5)-alpha-L-arabinofuranobiose, arabinoxylan, sugar beet arabinan, and debranched arabinan. Arabinose 14-25 beta-xylosidase 3 Arabidopsis thaliana 0-4 16221096-14 2005 Continuous treatment with either ARA or ACEI could abrogate ANG II-stimulated circulating lymphocyte apoptosis. Arabinose 33-36 angiotensinogen Rattus norvegicus 60-66 16129482-6 2005 The acidic polysaccharide (ASP2, ASP3) consisted mainly of galacturonic acid along with rhamnose, arabinose, and galactose indicating a pectic polysaccharide. Arabinose 98-107 audiogenic seizure prone 2 Mus musculus 27-31 16129482-6 2005 The acidic polysaccharide (ASP2, ASP3) consisted mainly of galacturonic acid along with rhamnose, arabinose, and galactose indicating a pectic polysaccharide. Arabinose 98-107 audiogenic seizure prone 3 Mus musculus 33-37 12862206-6 2003 ARA improved insulin resistance, and reduced plasma leptin and leptin mRNA in adipose tissue. Arabinose 0-3 insulin Homo sapiens 13-20 15468113-5 2004 For arabinose-containing feruloylated compounds, results obtained with both analyzers show that it is possible to assign the location of the feruloyl group to the O-2 or O-5 of arabinosyl residues. Arabinose 4-13 immunoglobulin kappa variable 1D-39 Homo sapiens 163-166 15468113-5 2004 For arabinose-containing feruloylated compounds, results obtained with both analyzers show that it is possible to assign the location of the feruloyl group to the O-2 or O-5 of arabinosyl residues. Arabinose 4-13 immunoglobulin kappa variable 2D-36 (pseudogene) Homo sapiens 170-173 15326589-3 2004 Arabinose, which regulates the position of the arm in AraC protein now regulates the availability of the alpha-peptide to alpha-acceptor beta-galactosidase, thereby modulating its activity in response to arabinose. Arabinose 0-9 galactosidase beta 1 Homo sapiens 137-155 15326589-3 2004 Arabinose, which regulates the position of the arm in AraC protein now regulates the availability of the alpha-peptide to alpha-acceptor beta-galactosidase, thereby modulating its activity in response to arabinose. Arabinose 204-213 galactosidase beta 1 Homo sapiens 137-155 15381006-1 2004 The polysaccharide isolated from the gum exudate of palm Scheelea phalerata (SPN) was water-insoluble and composed of Fuc, Ara, Xyl, and uronic acid moieties in a 5:34:54:7 molar ratio: 12% of phenolics were also present. Arabinose 123-126 DEAF1 transcription factor Homo sapiens 77-80 15145932-5 2004 Pentoses, such as arabinose, ribose, and deoxyribose, inhibit the interaction between SP-D and mannan, one of the well-studied hexose ligands for SP-D, and biologically relevant d-forms of the pentoses are better competitors than the l-forms. Arabinose 18-27 surfactant associated protein D Mus musculus 86-90 15145932-5 2004 Pentoses, such as arabinose, ribose, and deoxyribose, inhibit the interaction between SP-D and mannan, one of the well-studied hexose ligands for SP-D, and biologically relevant d-forms of the pentoses are better competitors than the l-forms. Arabinose 18-27 surfactant associated protein D Mus musculus 146-150 15840645-7 2005 Glycosyl composition and linkage analyses of purified GFP-AtAGP17 showed that carbohydrate accounted for approximately 86% of the molecule, with arabinose and galactose as major, and rhamnose and glucuronic acid as minor glycosyl residues and with 1,3,6-galactose, 1,4-glucuronic acid, 1,3-galactose and terminal arabinose as major linkages. Arabinose 145-154 arabinogalactan protein 17 Arabidopsis thaliana 58-65 15840645-7 2005 Glycosyl composition and linkage analyses of purified GFP-AtAGP17 showed that carbohydrate accounted for approximately 86% of the molecule, with arabinose and galactose as major, and rhamnose and glucuronic acid as minor glycosyl residues and with 1,3,6-galactose, 1,4-glucuronic acid, 1,3-galactose and terminal arabinose as major linkages. Arabinose 313-322 arabinogalactan protein 17 Arabidopsis thaliana 58-65 15556290-2 2004 Regulation of gamma ori plasmid copy number is achieved through arabinose-inducible expression of the necessary Rep protein, pi, whose gene was integrated into the chromosome of the host strain under control of the P(BAD) promoter. Arabinose 64-73 replication protein Escherichia coli 112-115 15274676-9 2004 Mean bradykinin plasma levels peaked in the efferent line post-adsorber at 1000 mL of treated blood volume; 467 fmol/mL (N = 6 sessions) in the ARA-treated patients and 671 fmol/mL (N = 9 sessions) in a control group of three DALI patients without ARA medication (P = 0.69, n.s.). Arabinose 248-251 kininogen 1 Homo sapiens 5-15 15113665-0 2004 Synthesis of L-arabinose-containing fragments of the oat root saponin Avenacin A-1. Arabinose 13-24 immunoglobulin kappa variable 2D-30 Homo sapiens 79-82 12862206-6 2003 ARA improved insulin resistance, and reduced plasma leptin and leptin mRNA in adipose tissue. Arabinose 0-3 leptin Rattus norvegicus 52-58 12862206-6 2003 ARA improved insulin resistance, and reduced plasma leptin and leptin mRNA in adipose tissue. Arabinose 0-3 leptin Rattus norvegicus 63-69 12862206-7 2003 These results suggest that the improvement of insulin resistance by ARA may be attributed, at least in part, to the reduction of adipose tissue weight. Arabinose 68-71 insulin Homo sapiens 46-53 12566589-1 2003 The mur4 mutant of Arabidopsis shows a 50% reduction in the monosaccharide L-Ara in leaf-derived cell wall material because of a partial defect in the 4-epimerization of UDP-D-Xyl to UDP-L-Ara. Arabinose 75-80 NAD(P)-binding Rossmann-fold superfamily protein Arabidopsis thaliana 4-8 12271459-4 2002 Decreased arabitol formation from L-arabinose indicates that Gre3p, Ypr1p and the protein encoded by YJR096w are the major arabinose reducers in S. cerevisiae. Arabinose 34-45 trifunctional aldehyde reductase/xylose reductase/glucose 1-dehydrogenase (NADP(+)) Saccharomyces cerevisiae S288C 61-66 12566589-0 2003 The biosynthesis of L-arabinose in plants: molecular cloning and characterization of a Golgi-localized UDP-D-xylose 4-epimerase encoded by the MUR4 gene of Arabidopsis. Arabinose 20-31 NAD(P)-binding Rossmann-fold superfamily protein Arabidopsis thaliana 143-147 12239236-3 2002 Olmesartan, an angiotensin II type 1 receptor (AIIR) antagonist, as well as temocaprilat, an angiotensin-converting enzyme (ACE) inhibitor, unlike nifedipine, a calcium blocker, inhibit in vitro the formation of two AGE, pentosidine and N(epsilon)-carboxymethyllysine (CML), during incubation of nonuremic diabetic, nondiabetic uremic, or diabetic uremic plasma or of BSA fortified with arabinose. Arabinose 387-396 angiotensin I converting enzyme Homo sapiens 124-127 12271459-4 2002 Decreased arabitol formation from L-arabinose indicates that Gre3p, Ypr1p and the protein encoded by YJR096w are the major arabinose reducers in S. cerevisiae. Arabinose 36-45 trifunctional aldehyde reductase/xylose reductase/glucose 1-dehydrogenase (NADP(+)) Saccharomyces cerevisiae S288C 61-66 12271459-8 2002 These results, in combination with those obtained with the deletion mutants, suggest that Gre3p, Ypr1p and the protein encoded by YJR096w are capable of xylose and arabinose reduction in S. cerevisiae. Arabinose 164-173 trifunctional aldehyde reductase/xylose reductase/glucose 1-dehydrogenase (NADP(+)) Saccharomyces cerevisiae S288C 90-95 12271459-8 2002 These results, in combination with those obtained with the deletion mutants, suggest that Gre3p, Ypr1p and the protein encoded by YJR096w are capable of xylose and arabinose reduction in S. cerevisiae. Arabinose 164-173 trifunctional aldehyde reductase/carbonyl reductase (NADPH)/glucose 1-dehydrogenase (NADP(+)) YPR1 Saccharomyces cerevisiae S288C 97-102 12198576-2 2002 By the induction with 0.02% L-(+)-arabinose, the recombinant metalloproteinase was expressed in insoluble inclusion body in E. coli TOP10 and reached up to 5%--10% of total bacterial proteins. Arabinose 28-43 metalloproteinase Escherichia coli 61-78 12222658-5 2002 Significant TNF-stimulating activity was found in the extractable polysaccharide fraction, which was hydrolyzed and found to contain glucose, galactose, arabinose, rhamnose, and mannose. Arabinose 153-162 tumor necrosis factor Rattus norvegicus 12-15 11743104-8 2001 Stems of plants overexpressing AtFUT4 or AtFUT5 contained more xylose, less arabinose, and less galactose than wild-type plants. Arabinose 76-85 fucosyltransferase 4 Arabidopsis thaliana 31-37 11871902-2 2002 The same process, consisting of reaction with a O-silyl-protected hydroxylamine followed by mesylation in pyridine, furnished ent-3 in 55% yield when applied to L-arabinose. Arabinose 161-172 solute carrier family 29 member 3 Homo sapiens 126-131 11994903-6 2002 Under combined hyperglycemia and ARA infusion, lean subjects displayed a 32% augmentation in insulin levels [AUC 33,565+/-3556 (placebo) to 44,562+/-1379 (ARA) pmol/l/min, p<0.01]. Arabinose 33-36 insulin Homo sapiens 93-100 12010000-0 2002 Oxidation of ferulic acid or arabinose-esterified ferulic acid by wheat germ peroxidase. Arabinose 29-38 peroxidase-like Triticum aestivum 77-87 11743104-8 2001 Stems of plants overexpressing AtFUT4 or AtFUT5 contained more xylose, less arabinose, and less galactose than wild-type plants. Arabinose 76-85 fucosyltransferase 5 Arabidopsis thaliana 41-47 10438792-0 1999 Escherichia coli gene ydeA encodes a major facilitator pump which exports L-arabinose and isopropyl-beta-D-thiogalactopyranoside. Arabinose 74-85 YdeA Escherichia coli 22-26 10684604-5 2000 The PDF gene, def, was placed under control of P(BAD) in E. coli tolC, permitting regulation of PDF expression levels in the cell by varying the external arabinose concentration. Arabinose 154-163 peptide deformylase, mitochondrial Homo sapiens 4-7 10684604-5 2000 The PDF gene, def, was placed under control of P(BAD) in E. coli tolC, permitting regulation of PDF expression levels in the cell by varying the external arabinose concentration. Arabinose 154-163 peptide deformylase Escherichia coli 14-17 10684604-5 2000 The PDF gene, def, was placed under control of P(BAD) in E. coli tolC, permitting regulation of PDF expression levels in the cell by varying the external arabinose concentration. Arabinose 154-163 peptide deformylase, mitochondrial Homo sapiens 96-99 10517829-3 1999 Feeding L-arabinose to mur4 plants restores the cell wall composition to wild-type levels, suggesting a partial defect in the de novo synthesis of UDP-L-arabinose, the activated sugar used by arabinosyltransferases. Arabinose 8-19 NAD(P)-binding Rossmann-fold superfamily protein Arabidopsis thaliana 23-27 10438792-1 1999 Inactivation of the Escherichia coli gene ydeA, which encodes a member of the major facilitator superfamily, decreased the efflux of L-arabinose, thereby affecting the expression of AraC-regulated genes. Arabinose 133-144 YdeA Escherichia coli 42-46 10094697-0 1999 Transcriptional activation of ydeA, which encodes a member of the major facilitator superfamily, interferes with arabinose accumulation and induction of the Escherichia coli arabinose PBAD promoter. Arabinose 113-122 YdeA Escherichia coli 30-34 10094697-10 1999 Intracellular accumulation of arabinose is strongly decreased in mutant strains overexpressing YdeA, suggesting that YdeA facilitates arabinose export. Arabinose 30-39 YdeA Escherichia coli 95-99 10367260-7 1999 In addition, the relationship between ARA and severity of incontinence was assessed by the eta coefficient. Arabinose 38-41 endothelin receptor type A Homo sapiens 91-94 10094697-10 1999 Intracellular accumulation of arabinose is strongly decreased in mutant strains overexpressing YdeA, suggesting that YdeA facilitates arabinose export. Arabinose 30-39 YdeA Escherichia coli 117-121 10094697-10 1999 Intracellular accumulation of arabinose is strongly decreased in mutant strains overexpressing YdeA, suggesting that YdeA facilitates arabinose export. Arabinose 134-143 YdeA Escherichia coli 95-99 10094697-10 1999 Intracellular accumulation of arabinose is strongly decreased in mutant strains overexpressing YdeA, suggesting that YdeA facilitates arabinose export. Arabinose 134-143 YdeA Escherichia coli 117-121 10094697-11 1999 Consistent with this interpretation, very high arabinose concentrations can compensate for the negative effect of ydeA transcriptional activation. Arabinose 47-56 YdeA Escherichia coli 114-118 10217709-3 1999 The saccharide moieties linked to the C-3, C-6, and C-24 or C-25 positions of the aglycons in 1-6 contained either xylopyranose, glucopyranose, rhamnopyranose, or arabinopyranose units. Arabinose 163-178 complement C3 Homo sapiens 38-41 10094697-12 1999 Our studies (i) indicate that YdeA, when transcriptionally activated, contributes to the control of the arabinose regulon and (ii) demonstrate a new way to modulate the kinetics of induction of cloned genes. Arabinose 104-113 YdeA Escherichia coli 30-34 9791112-10 1998 4-Hydroxyacetophenone and other related phenolic compounds function as inducing phenolic compounds with the virA gene of A6 if arabinose replaces glucose as the inducing sugar. Arabinose 127-136 two-component VirA-like sensor kinase Agrobacterium tumefaciens 108-112 8722088-3 1996 Of the three fractions, the amount of TPS-1 accounted for over 60% of total yield of ECP, which was a predominant polysaccharide consisting of arabinose (Ara), mannose (Man) and galactose (Gal) as major neutral monosaccharides. Arabinose 143-152 tryptase alpha/beta 1 Homo sapiens 38-43 9512767-1 1998 The plant cell wall hydroxyproline-rich glycoprotein (HRGP), also called extensin, contains arabinose and oligoarabinoside side chains O-glycosidically linked to hydroxyproline (Hyp). Arabinose 92-101 histidine rich glycoprotein Homo sapiens 20-52 9512767-1 1998 The plant cell wall hydroxyproline-rich glycoprotein (HRGP), also called extensin, contains arabinose and oligoarabinoside side chains O-glycosidically linked to hydroxyproline (Hyp). Arabinose 92-101 histidine rich glycoprotein Homo sapiens 54-58 9572938-2 1998 A typical pACYC184-based plasmid which was obtained could express the major DnaK-DnaJ-GrpE and GroEL-GroES chaperone teams from separate promoters when L-arabinose and tetracycline, respectively, were added in a dose-dependent fashion. Arabinose 152-163 GroEL Escherichia coli 95-100 9572938-2 1998 A typical pACYC184-based plasmid which was obtained could express the major DnaK-DnaJ-GrpE and GroEL-GroES chaperone teams from separate promoters when L-arabinose and tetracycline, respectively, were added in a dose-dependent fashion. Arabinose 152-163 chaperonin GroES Escherichia coli 101-106 9438984-1 1997 Human Cu,Zn-superoxide dismutase (SOD) was incubated with various intermediates of the Maillard reaction and glycolytic pathway (arabinose, glyoxal, glycolaldehyde, glyceraldehyde, glyceraldehyde 3-phosphate, and dihydroxyacetone) and some reducing sugars (sorbose, xylose, and ribose). Arabinose 129-138 superoxide dismutase 1 Homo sapiens 6-32 9438984-1 1997 Human Cu,Zn-superoxide dismutase (SOD) was incubated with various intermediates of the Maillard reaction and glycolytic pathway (arabinose, glyoxal, glycolaldehyde, glyceraldehyde, glyceraldehyde 3-phosphate, and dihydroxyacetone) and some reducing sugars (sorbose, xylose, and ribose). Arabinose 129-138 superoxide dismutase 1 Homo sapiens 34-37 9283030-1 1997 The hot acid extract of pea hull, HSP, was rich in galacturonic acid, arabinose and xylose. Arabinose 70-79 heat shock protein 90 beta family member 2, pseudogene Homo sapiens 34-37 12572434-3 1997 By gas chromatography analysis, LOK composes of rhamnose, arabinose, xylose, mannose, glucose and galactose. Arabinose 58-67 serine/threonine kinase 10 Homo sapiens 32-35 8722088-3 1996 Of the three fractions, the amount of TPS-1 accounted for over 60% of total yield of ECP, which was a predominant polysaccharide consisting of arabinose (Ara), mannose (Man) and galactose (Gal) as major neutral monosaccharides. Arabinose 154-157 tryptase alpha/beta 1 Homo sapiens 38-43 8522519-6 1995 The positions of the labeled atoms in the arabinose made from [1-14C]glucose and [6-3H]glucose were shown to be C-1 and H-5, respectively. Arabinose 42-51 heterogeneous nuclear ribonucleoprotein C Homo sapiens 112-123 8649192-2 1996 We show here that enzymatically active recombinant CLC binds to a lactose-conjugated agarose resin, and that binding is inhibited in a dose dependent fashion by both lactose (IC50 = 41 mM) and fucose (IC50 = 380 mM), but not by arabinose. Arabinose 228-237 Charcot-Leyden crystal galectin Homo sapiens 51-54 8596460-4 1995 In the presence of 0.2% arabinose, the cells formed long filaments, suggesting that activation of the inverted Ter sites by Tus arrested DNA replication and delayed the onset of cell division. Arabinose 24-33 Ter DNA replication terminus site binding protein Escherichia coli 111-114 16349415-1 1994 A color variant strain of Aureobasidium pullulans (NRRL Y-12974) produced beta-glucosidase activity when grown in liquid culture on a variety of carbon sources, such as cellobiose, xylose, arabinose, lactose, sucrose, maltose, glucose, xylitol, xylan, cellulose, starch, and pullulan. Arabinose 189-198 beta-glucosidase Zea mays 74-90 8051137-10 1994 The sugar specificity of STP1 was D-mannose > or = 2-deoxyglucose > D-galactose > or = 3OMG > D-xylose > D-glucose > D-fucose > D-fructose > L-glucose > L-arabinose > D-arabinose, demonstrating that STP1 has a low substrate specificity. Arabinose 180-191 sugar transporter 1 Arabidopsis thaliana 25-29 7764377-5 1994 IA-1 consisted mainly of arabinose (Ara), galactose (Gal) and glucose (Glc) in molar ratios of 1.8:1.0:0.9, whereas IB-1 and IC-1 were composed mainly of Ara, mannose (Man), Gal and Glc in molar ratios of 3.5:0.8:1.0:0.8 and 2.3:3.5:1.0:3.2, respectively. Arabinose 25-34 INSM transcriptional repressor 1 Homo sapiens 0-4 7932108-7 1994 Arabinose, xylose and galactose induced the A. caviae beta-galactosidase activity by several folds and lactose moderately enhanced its activity. Arabinose 0-9 galactosidase beta 1 Homo sapiens 54-72 7699416-10 1994 The concentration in the LOX tumor reached therapeutic levels and was approximately 100 x higher than in normal brain tissue, both with and without intraarterial pretreatment with arabinose. Arabinose 180-189 lysyl oxidase Homo sapiens 25-28 7764377-5 1994 IA-1 consisted mainly of arabinose (Ara), galactose (Gal) and glucose (Glc) in molar ratios of 1.8:1.0:0.9, whereas IB-1 and IC-1 were composed mainly of Ara, mannose (Man), Gal and Glc in molar ratios of 3.5:0.8:1.0:0.8 and 2.3:3.5:1.0:3.2, respectively. Arabinose 36-39 INSM transcriptional repressor 1 Homo sapiens 0-4 8490003-5 1993 Bean non-cellulosic polysaccharides were highly digestible with values of 0.98, 0.88 and 0.99 for arabinose, xylose and uronic acids components respectively. Arabinose 98-107 brain expressed, associated with NEDD4, 1 Rattus norvegicus 0-4 8393658-7 1993 Arabinose, xylose, mannose, ribose, fructose and glucose 6-phosphate (but not mannitol) were also able to inactive the ATPase. Arabinose 0-9 dynein axonemal heavy chain 8 Homo sapiens 119-125 8516313-3 1993 In vivo and in vitro experiments showed that a fusion protein consisting of the N-terminal half of the AraC protein and the DNA-binding domain of the LexA repressor dimerizes, binds well to a LexA operator, and represses expression of a LexA operator-beta-galactosidase fusion gene in an arabinose-responsive manner. Arabinose 288-297 DNA repair system Escherichia coli 150-154 8516313-3 1993 In vivo and in vitro experiments showed that a fusion protein consisting of the N-terminal half of the AraC protein and the DNA-binding domain of the LexA repressor dimerizes, binds well to a LexA operator, and represses expression of a LexA operator-beta-galactosidase fusion gene in an arabinose-responsive manner. Arabinose 288-297 DNA repair system Escherichia coli 192-196 8516313-3 1993 In vivo and in vitro experiments showed that a fusion protein consisting of the N-terminal half of the AraC protein and the DNA-binding domain of the LexA repressor dimerizes, binds well to a LexA operator, and represses expression of a LexA operator-beta-galactosidase fusion gene in an arabinose-responsive manner. Arabinose 288-297 DNA repair system Escherichia coli 192-196 7764229-11 1993 Treatment of extensin with trifluoroacetic acid demonstrated that arabinose was the principal carbohydrate. Arabinose 66-75 extensin-3-like Solanum lycopersicum 13-21 8424675-8 1993 Reduction of ARa with dithiothreitol released 0.7 mol of 2-mercaptoethanol per mole of enzyme and converted it to a form that resembled the native aldose reductase. Arabinose 13-16 aldose reductase Bos taurus 147-163 1310062-12 1992 Taken together, these findings indicate that: (1) enhancement of JUN/AP-1 activity in ara-C-treated cells involves a posttranslational modification of JUN/AP-1; and (2) binding of activated JUN/AP-1 to the AP-1 site in the c-jun promoter confers ara-C inducibility of this gene. Arabinose 86-89 Jun proto-oncogene, AP-1 transcription factor subunit Homo sapiens 69-73 1644312-1 1992 The araC gene encodes a regulatory protein, AraC, that acts as both an activator and a repressor of transcription of the genes involved in the transport and catabolism of L-arabinose in Salmonella typhimurium LT2. Arabinose 171-182 DNA-binding transcriptional regulator AraC Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 4-8 1644312-1 1992 The araC gene encodes a regulatory protein, AraC, that acts as both an activator and a repressor of transcription of the genes involved in the transport and catabolism of L-arabinose in Salmonella typhimurium LT2. Arabinose 171-182 DNA-binding transcriptional regulator AraC Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 44-48 16668921-6 1992 The smaller extensin monomer reported here (Superose-6 peak 2 [SP2]) was compositionally similar to typical dicot extensins such as tomato P1, mainly consisting of Hyp, Thr, Ser, Pro, Val, Tyr, Lys, His, abundant arabinose, and a small but significant galactose content. Arabinose 213-222 extensin-3-like Solanum lycopersicum 12-20 1572104-5 1992 In contrast to previous reports the 21 amino acid long C3a analogue peptide did not exhibit full C3a activity but only 7% (ARA) or 12% (ICA). Arabinose 123-126 complement C3 Homo sapiens 55-58 1310062-12 1992 Taken together, these findings indicate that: (1) enhancement of JUN/AP-1 activity in ara-C-treated cells involves a posttranslational modification of JUN/AP-1; and (2) binding of activated JUN/AP-1 to the AP-1 site in the c-jun promoter confers ara-C inducibility of this gene. Arabinose 86-89 Jun proto-oncogene, AP-1 transcription factor subunit Homo sapiens 155-159 1310062-12 1992 Taken together, these findings indicate that: (1) enhancement of JUN/AP-1 activity in ara-C-treated cells involves a posttranslational modification of JUN/AP-1; and (2) binding of activated JUN/AP-1 to the AP-1 site in the c-jun promoter confers ara-C inducibility of this gene. Arabinose 86-89 Jun proto-oncogene, AP-1 transcription factor subunit Homo sapiens 155-159 1310062-12 1992 Taken together, these findings indicate that: (1) enhancement of JUN/AP-1 activity in ara-C-treated cells involves a posttranslational modification of JUN/AP-1; and (2) binding of activated JUN/AP-1 to the AP-1 site in the c-jun promoter confers ara-C inducibility of this gene. Arabinose 86-89 Jun proto-oncogene, AP-1 transcription factor subunit Homo sapiens 155-159 1310062-12 1992 Taken together, these findings indicate that: (1) enhancement of JUN/AP-1 activity in ara-C-treated cells involves a posttranslational modification of JUN/AP-1; and (2) binding of activated JUN/AP-1 to the AP-1 site in the c-jun promoter confers ara-C inducibility of this gene. Arabinose 86-89 Jun proto-oncogene, AP-1 transcription factor subunit Homo sapiens 223-228 1797398-4 1991 Desulphation and analysis of the polymeric product showed that sulphate groups were located at C-2 of some of the interior arabinose residues, C-4 of some of the non-reducing-end arabisoyl groups, and C-3 of the non-reducing-end galactosyl groups. Arabinose 123-132 complement C2 Homo sapiens 95-98 18475453-1 1992 Regulatory mechanisms in bradykinin (BK) activated release of arachidonate (ARA) and synthesis of prostaglandin (PG) and platelet activating factor (PAF) were studied in bovine pulmonary artery endothelial cells (BPAEC). Arabinose 76-79 kininogen 1 Bos taurus 25-35 18475453-1 1992 Regulatory mechanisms in bradykinin (BK) activated release of arachidonate (ARA) and synthesis of prostaglandin (PG) and platelet activating factor (PAF) were studied in bovine pulmonary artery endothelial cells (BPAEC). Arabinose 76-79 kininogen 1 Bos taurus 37-39 18475453-15 1992 These results taken together point to the participation of G-protein in the binding of BK to BPAEC and its activation of ARA release. Arabinose 121-124 kininogen 1 Bos taurus 87-89 2078020-7 1990 The presence of a fluorine atom in the arabinose configuration on C-2 confers resistance to solvolysis and renders the analogue less susceptible to enzymatic deamination and resistant to phosphorylytic cleavage by PNP. Arabinose 39-48 purine nucleoside phosphorylase Homo sapiens 214-217 1367384-10 1991 Sulphate groups are present on some of the arabinose units at C-2 and on some of the galactose units at C-2 and C-3. Arabinose 43-52 complement C2 Homo sapiens 62-65 2249984-8 1990 The purified r epsilon BP exhibits binding activity to various saccharides, with affinity for N-acetyllactosamine greater than thiodigalactoside greater than lactose much greater than D-galactose greater than L-arabinose, an order identical to that exhibited by native epsilon BP isolated from RBL cells. Arabinose 209-220 galectin 3 Rattus norvegicus 15-25 34873736-2 2022 They were composed of different monosaccharides and the content of monosaccharides varied significantly while DLP-1 (Mw 1.38 x 106 Da) was mainly composed of mannose (71.69%) and glucose (22.89%), and DLP-2 (Mw 1.93 x 106 Da) was constituted by rhamnose (35.05%), arabinose (24.12%), and galactose (25.65%). Arabinose 266-275 prenyl (solanesyl) diphosphate synthase, subunit 2 Mus musculus 110-115 34823411-5 2021 The monosaccharide composition of GLP was glucose, glucuronic acid, galactose and arabinose with molar ratios of 0.91:0.04:0.03:0.02, respectively. Arabinose 82-91 euchromatic histone methyltransferase 1 Mus musculus 34-37 34726315-6 2022 Monosaccharide composition analysis revealed significant reductions in all sugars in glcat14a/b and glcat14a/b/c mutants except for arabinose and galactose, while immunolabeling showed decreased amounts of AGP sugar epitopes recognized by glcat14a/b and glcat14a/b/c mutants compared to wild type. Arabinose 132-141 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein Arabidopsis thaliana 85-95 34726315-6 2022 Monosaccharide composition analysis revealed significant reductions in all sugars in glcat14a/b and glcat14a/b/c mutants except for arabinose and galactose, while immunolabeling showed decreased amounts of AGP sugar epitopes recognized by glcat14a/b and glcat14a/b/c mutants compared to wild type. Arabinose 132-141 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein Arabidopsis thaliana 100-112 34166692-2 2021 The results showed that COP1 were 18.843 kDa, and consisted of arabinose (56.6 mol%), galactose (24.9 mol%), xylose (11.1 mol%), and glucose (7.4 mol%). Arabinose 63-72 COP1, E3 ubiquitin ligase Mus musculus 24-28 34127216-3 2021 SHPS-1 consisted of arabinose, mannose, glucose, and galactose at a molar ratio of 2.2:15.7:49.3:32.8. Arabinose 20-29 signal-regulatory protein alpha Mus musculus 0-6 34585194-5 2021 The results showed that CYP is a mixture with an average Mw of 75.57 kDa and is mainly composed of rhamnose, glucuronic acid, glucose, galactose, and arabinose with a molar ratio of 0.01 : 0.06 : 1.00 : 0.17 : 0.01. Arabinose 150-159 peptidyl-prolyl isomerase G (cyclophilin G) Mus musculus 24-27 34393698-0 2021 L-arabinose and D-xylose: sweet pentoses that may reduce postprandial glucose and insulin responses. Arabinose 0-11 insulin Homo sapiens 82-89 34236855-3 2021 All of the prepared compounds, derived from either d-galactose or l-arabinose, have shown high affinity and NK1R antagonistic activity with a broad-spectrum anticancer activity and an important selectivity, comparable to Cisplatin. Arabinose 66-77 tachykinin receptor 1 Homo sapiens 108-112 34356378-2 2021 The results showed that GLP-1 and GLP-2 were mainly composed of mannose, glucose, galactose, xylose, and arabinose, with weight-average molecular weights of 6.31 and 14.07 kDa, respectively. Arabinose 105-114 glucagon Mus musculus 24-29 35337516-3 2022 The heteropolysaccharide ARP-1 was composed of fucose, arabinose, galactose, glucose and mannose with a molar ratio of 0.40:14.25:10.22:1.06:0.41. Arabinose 55-64 nuclear receptor subfamily 2, group F, member 2 Rattus norvegicus 25-30 34393698-10 2021 Results: Glucose and insulin peaks were lower after the L-arabinose and D-xylose drink than the control drink (P < 0.01). Arabinose 56-67 insulin Homo sapiens 21-28 35533849-4 2022 RRP consisted of glucose, galacturonic acid, mannose, rhamnose, galactose, arabinose, xylose, and glucuronic acid (molar ratio: 7.78:7.59:4.23:3.22:3.15:1.65:1.00), with Mw of 327.92 kDa. Arabinose 75-84 ribosome binding protein 1 Homo sapiens 0-3 34316219-9 2021 The optimum concentrations of arabinose and induction time for the recombinant full-length and the recombinant 35 kDa fragment VP2 proteins were 0.2% for 6 h and 0.02% for 6 h, respectively. Arabinose 30-39 VP2 Canine parvovirus 127-130 35526489-0 2022 MPK4 negatively regulates the l-arabinose synthesis of cell wall in Arabidopsis. Arabinose 30-41 MAP kinase 4 Arabidopsis thaliana 0-4 35526489-3 2022 In this study, we found that the l-arabinose content in mpk4 mutant was much higher compared to those in wild type, mpk3 and mpk6 mutants, whereas overexpressing MPK4 in Arabidopsis obviously decreased the l-arabinose content of cell wall. Arabinose 33-44 MAP kinase 4 Arabidopsis thaliana 56-60 35526489-3 2022 In this study, we found that the l-arabinose content in mpk4 mutant was much higher compared to those in wild type, mpk3 and mpk6 mutants, whereas overexpressing MPK4 in Arabidopsis obviously decreased the l-arabinose content of cell wall. Arabinose 33-44 mitogen-activated protein kinase 3 Arabidopsis thaliana 116-120 35526489-3 2022 In this study, we found that the l-arabinose content in mpk4 mutant was much higher compared to those in wild type, mpk3 and mpk6 mutants, whereas overexpressing MPK4 in Arabidopsis obviously decreased the l-arabinose content of cell wall. Arabinose 33-44 MAP kinase 4 Arabidopsis thaliana 162-166 35526489-3 2022 In this study, we found that the l-arabinose content in mpk4 mutant was much higher compared to those in wild type, mpk3 and mpk6 mutants, whereas overexpressing MPK4 in Arabidopsis obviously decreased the l-arabinose content of cell wall. Arabinose 206-217 MAP kinase 4 Arabidopsis thaliana 56-60 35526489-3 2022 In this study, we found that the l-arabinose content in mpk4 mutant was much higher compared to those in wild type, mpk3 and mpk6 mutants, whereas overexpressing MPK4 in Arabidopsis obviously decreased the l-arabinose content of cell wall. Arabinose 206-217 MAP kinase 4 Arabidopsis thaliana 162-166 35526489-4 2022 Furthermore, loss of function in MPK4 significantly decreased the expression of l-arabinose synthesis/metabolism-related gene MUR10, but did not affect the expressions of the other genes (MUR4, MUR5, UXT1 and ARAD1). Arabinose 80-91 MAP kinase 4 Arabidopsis thaliana 33-37 35526489-4 2022 Furthermore, loss of function in MPK4 significantly decreased the expression of l-arabinose synthesis/metabolism-related gene MUR10, but did not affect the expressions of the other genes (MUR4, MUR5, UXT1 and ARAD1). Arabinose 80-91 Cellulose synthase family protein Arabidopsis thaliana 126-131 35526489-6 2022 These results suggest that MPK4 negatively regulates the l-arabinose synthesis of cell wall by likely modulating the expression of MUR10. Arabinose 57-68 MAP kinase 4 Arabidopsis thaliana 27-31 35526489-6 2022 These results suggest that MPK4 negatively regulates the l-arabinose synthesis of cell wall by likely modulating the expression of MUR10. Arabinose 57-68 Cellulose synthase family protein Arabidopsis thaliana 131-136 35346678-1 2022 One galactose- and arabinose-rich polysaccharide isolated from Sambucus adnata was named SPS-1, which had an average molecular weight 138.52 kDa, and was composed of L-rhamnose, D-glucuronic acid, D-galacturonic acid, D-galactose, and L-arabinose in a molar ratio of 0.6:0.4:0.1:4.9:4.0. Arabinose 19-28 selenophosphate synthetase 1 Mus musculus 89-94 35627036-6 2022 ACP contains mannitol 32.41%, glucuronic acid 6.96%, rhamnose 0.32%, glucose 42.35%, galactose 0.77%, xylose 16.83%, and fucose 0.36%, without galacturonic acid and arabinose. Arabinose 165-174 vitamin A enhanced cleft palate Mus musculus 0-3 35346678-1 2022 One galactose- and arabinose-rich polysaccharide isolated from Sambucus adnata was named SPS-1, which had an average molecular weight 138.52 kDa, and was composed of L-rhamnose, D-glucuronic acid, D-galacturonic acid, D-galactose, and L-arabinose in a molar ratio of 0.6:0.4:0.1:4.9:4.0. Arabinose 235-246 selenophosphate synthetase 1 Mus musculus 89-94 35428331-6 2022 RESULTS: L-Arabinose supplementation significantly reduced body weight gain, lowered circulating low-density lipoprotein cholesterol (LDL-C) while increasing high-density lipoprotein cholesterol (HDL-C) levels, and efficiently alleviated hepatic inflammation and lipid accumulations in HFHSD-fed mice. Arabinose 9-20 component of oligomeric golgi complex 2 Mus musculus 134-139 35428331-7 2022 L-Arabinose inhibited cholesterol synthesis via downregulation of 3-hydroxy-3-methylglutaryl-CoA reductase (HMGCR). Arabinose 0-11 3-hydroxy-3-methylglutaryl-Coenzyme A reductase Mus musculus 66-106 35428331-7 2022 L-Arabinose inhibited cholesterol synthesis via downregulation of 3-hydroxy-3-methylglutaryl-CoA reductase (HMGCR). Arabinose 0-11 3-hydroxy-3-methylglutaryl-Coenzyme A reductase Mus musculus 108-113 35428331-8 2022 Additionally, L-arabinose might facilitate reverse cholesterol transport, evidenced by the increased mRNA expressions of low-density lipoprotein receptor (LDL-R) and scavenger receptor class B type 1 (SR-B1). Arabinose 14-25 low density lipoprotein receptor Mus musculus 121-153 35428331-8 2022 Additionally, L-arabinose might facilitate reverse cholesterol transport, evidenced by the increased mRNA expressions of low-density lipoprotein receptor (LDL-R) and scavenger receptor class B type 1 (SR-B1). Arabinose 14-25 low density lipoprotein receptor Mus musculus 155-160 35428331-8 2022 Additionally, L-arabinose might facilitate reverse cholesterol transport, evidenced by the increased mRNA expressions of low-density lipoprotein receptor (LDL-R) and scavenger receptor class B type 1 (SR-B1). Arabinose 14-25 scavenger receptor class B, member 1 Mus musculus 166-199 35428331-8 2022 Additionally, L-arabinose might facilitate reverse cholesterol transport, evidenced by the increased mRNA expressions of low-density lipoprotein receptor (LDL-R) and scavenger receptor class B type 1 (SR-B1). Arabinose 14-25 scavenger receptor class B, member 1 Mus musculus 201-206 35428331-9 2022 Furthermore, L-arabinose modulated ileal reabsorption of bile acids mainly through downregulation of ileal bile acid-binding protein (I-BABP) and apical sodium-dependent bile acid transporter (ASBT), resulting in the promotion of hepatic synthesis of bile acids via upregulation of cholesterol-7alpha-hydroxylase (CYP7A1). Arabinose 13-24 fatty acid binding protein 6 Mus musculus 101-132 35428331-9 2022 Furthermore, L-arabinose modulated ileal reabsorption of bile acids mainly through downregulation of ileal bile acid-binding protein (I-BABP) and apical sodium-dependent bile acid transporter (ASBT), resulting in the promotion of hepatic synthesis of bile acids via upregulation of cholesterol-7alpha-hydroxylase (CYP7A1). Arabinose 13-24 fatty acid binding protein 6 Mus musculus 134-140 35428331-9 2022 Furthermore, L-arabinose modulated ileal reabsorption of bile acids mainly through downregulation of ileal bile acid-binding protein (I-BABP) and apical sodium-dependent bile acid transporter (ASBT), resulting in the promotion of hepatic synthesis of bile acids via upregulation of cholesterol-7alpha-hydroxylase (CYP7A1). Arabinose 13-24 solute carrier family 10, member 2 Mus musculus 146-191 35428331-9 2022 Furthermore, L-arabinose modulated ileal reabsorption of bile acids mainly through downregulation of ileal bile acid-binding protein (I-BABP) and apical sodium-dependent bile acid transporter (ASBT), resulting in the promotion of hepatic synthesis of bile acids via upregulation of cholesterol-7alpha-hydroxylase (CYP7A1). Arabinose 13-24 solute carrier family 10, member 2 Mus musculus 193-197 35428331-9 2022 Furthermore, L-arabinose modulated ileal reabsorption of bile acids mainly through downregulation of ileal bile acid-binding protein (I-BABP) and apical sodium-dependent bile acid transporter (ASBT), resulting in the promotion of hepatic synthesis of bile acids via upregulation of cholesterol-7alpha-hydroxylase (CYP7A1). Arabinose 13-24 cytochrome P450, family 7, subfamily a, polypeptide 1 Mus musculus 282-312 35428331-9 2022 Furthermore, L-arabinose modulated ileal reabsorption of bile acids mainly through downregulation of ileal bile acid-binding protein (I-BABP) and apical sodium-dependent bile acid transporter (ASBT), resulting in the promotion of hepatic synthesis of bile acids via upregulation of cholesterol-7alpha-hydroxylase (CYP7A1). Arabinose 13-24 cytochrome P450, family 7, subfamily a, polypeptide 1 Mus musculus 314-320 35053889-0 2022 Efficacy of L-Arabinose in Lowering Glycemic and Insulinemic Responses: The Modifying Effect of Starch and Fat. Arabinose 12-23 FAT atypical cadherin 1 Homo sapiens 107-110 35053889-6 2022 The addition of L-arabinose to the control drink lowered glucose and insulin peaks by 15% and 52%; for the fat drink by 8% and 45%; and for the starch drink by 7% and 29%. Arabinose 16-27 insulin Homo sapiens 69-76 35053889-7 2022 For all three drinks, adding L-arabinose increased glucagon-like peptide 1 (GLP-1) responses and lowered Glucose-dependent insulinotropic polypeptide (GIP) responses. Arabinose 29-40 glucagon Homo sapiens 51-74 35053889-7 2022 For all three drinks, adding L-arabinose increased glucagon-like peptide 1 (GLP-1) responses and lowered Glucose-dependent insulinotropic polypeptide (GIP) responses. Arabinose 29-40 glucagon Homo sapiens 76-81 35053889-7 2022 For all three drinks, adding L-arabinose increased glucagon-like peptide 1 (GLP-1) responses and lowered Glucose-dependent insulinotropic polypeptide (GIP) responses. Arabinose 29-40 gastric inhibitory polypeptide Homo sapiens 105-149 35053889-7 2022 For all three drinks, adding L-arabinose increased glucagon-like peptide 1 (GLP-1) responses and lowered Glucose-dependent insulinotropic polypeptide (GIP) responses. Arabinose 29-40 gastric inhibitory polypeptide Homo sapiens 151-154 35170609-4 2022 The determination of the monosaccharide composition of CYPB with ion chromatography showed that CYPB was composed of rhamnose, glucose, arabinose, galactose, glucose, xylose and glucuronic acid with the ratio of 6 : 3.73 : 7.31 : 10.95 : 4.56 : 1. Arabinose 136-145 cytochrome P450, family 4, subfamily a, polypeptide 28, pseudogene Mus musculus 55-59 35170609-4 2022 The determination of the monosaccharide composition of CYPB with ion chromatography showed that CYPB was composed of rhamnose, glucose, arabinose, galactose, glucose, xylose and glucuronic acid with the ratio of 6 : 3.73 : 7.31 : 10.95 : 4.56 : 1. Arabinose 136-145 cytochrome P450, family 4, subfamily a, polypeptide 28, pseudogene Mus musculus 96-100 34989221-6 2022 Using the system and the strategy of fusion expression of target genes (rmlA and AsCas12a) plus mCherry, the recombinant AGS-1 strain achieved the effective induction of rmlA and AsCas12a-mCherry gene expression in the range of 0.0005 to 0.1% l-arabinose. Arabinose 243-254 jagged canonical Notch ligand 1 Homo sapiens 121-126 34989221-7 2022 These results demonstrate that the new arabinose-inducible vector could be used as an important molecular tool in the gene function and genome-editing research of strain AGS-1. Arabinose 39-48 jagged canonical Notch ligand 1 Homo sapiens 170-175