PMID-sentid Pub_year Sent_text comp_official_name comp_offsetprotein_name organism prot_offset 30120952-8 2018 Hydrogen-deuterium exchange studies revealed the footprint of the light-activated rhodopsin on sArr. Deuterium 9-18 rhodopsin Homo sapiens 82-91 25697520-0 2015 Probing conformational changes in rhodopsin using hydrogen-deuterium exchange coupled to mass spectrometry. Deuterium 59-68 rhodopsin Homo sapiens 34-43 25697521-0 2015 Analysis of conformational changes in rhodopsin by histidine hydrogen-deuterium exchange. Deuterium 70-79 rhodopsin Homo sapiens 38-47 25697522-0 2015 Investigation of rhodopsin dynamics in its signaling state by solid-state deuterium NMR spectroscopy. Deuterium 74-83 rhodopsin Homo sapiens 17-26 21806918-2 2011 We used this technique for the site-specific detection of light-induced hydrogen-deuterium exchange in the lipid-embedded heptahelical transmembrane photosensor Anabaena sensory rhodopsin to pinpoint the location of its conformational changes upon activation. Deuterium 81-90 rhodopsin Homo sapiens 178-187 21527723-0 2011 Solid-state 2H NMR relaxation illuminates functional dynamics of retinal cofactor in membrane activation of rhodopsin. Deuterium 12-14 rhodopsin Homo sapiens 108-117 18021739-13 2007 For rhodopsin, the strain energy and dynamics of retinal as established by 2H NMR are implicated in substituent control of activation. Deuterium 75-77 rhodopsin Homo sapiens 4-13 20939497-0 2010 Conformational changes in the g protein-coupled receptor rhodopsin revealed by histidine hydrogen-deuterium exchange. Deuterium 98-107 rhodopsin Homo sapiens 57-66 20939497-2 2010 Utilizing His residues found spaced throughout the GPCR, rhodopsin, we used His hydrogen-deuterium exchange (His-HDX) to monitor long-time scale structural rearrangements previously inaccessible by other means. Deuterium 89-98 rhodopsin Homo sapiens 57-66 17640664-0 2007 Structural analysis and dynamics of retinal chromophore in dark and meta I states of rhodopsin from 2H NMR of aligned membranes. Deuterium 100-102 rhodopsin Homo sapiens 85-94 10614048-8 1999 FT-IR studies on [2H]tyrosine-labelled rhodopsin demonstrate participation of several tyrosin(at)e residues in receptor activation. Deuterium 18-20 rhodopsin Homo sapiens 39-48 15475355-5 2004 We find deuterium affects the hydrolysis process in wild-type rhodopsin, exhibiting a specific isotope effect of approximately 2.5, and proton inventory studies indicate that multiple proton transfer events occur during the process of Schiff base hydrolysis for both dark state and MII forms. Deuterium 8-17 rhodopsin Homo sapiens 62-71 8038384-2 1994 We have employed continuous-flow resonance Raman experiments on both pigments to determine that the exchange of a deuteron on the Schiff base with a proton is very fast, with half-times of 6.9 +/- 0.9 and 1.3 +/- 0.3 ms for rhodopsin and bacteriorhodopsin, respectively. Deuterium 114-122 rhodopsin Homo sapiens 224-233 9449322-0 1998 Photoactivation of rhodopsin causes an increased hydrogen-deuterium exchange of buried peptide groups. Deuterium 58-67 rhodopsin Homo sapiens 19-28 9449322-2 1998 In order to explore the nature of these conformational changes, time-resolved Fourier transform infrared spectroscopy was used to measure the kinetics of hydrogen/deuterium exchange in rhodopsin upon photoexcitation. Deuterium 163-172 rhodopsin Homo sapiens 185-194 598499-0 1977 The hydrophobic heart of rhodopsin revealed by an infrared 1H-2H exchange study. Deuterium 62-64 rhodopsin Homo sapiens 25-34 3607032-1 1987 13C- and 2H-labeled retinal derivatives have been used to assign normal modes in the 1100-1300-cm-1 fingerprint region of the resonance Raman spectra of rhodopsin, isorhodopsin, and bathorhodopsin. Deuterium 9-11 rhodopsin Homo sapiens 153-162 7306517-0 1981 Interaction of rhodopsin with two unsaturated phosphatidylcholines: a deuterium nuclear magnetic resonance study. Deuterium 70-79 rhodopsin Homo sapiens 15-24