PMID-sentid	Pub_year	Sent_text		comp_official_name	comp_offsetprotein_name	organism	prot_offset
23716696-5	2013	We also show that activated Ypt1 recruits the putative membrane curvature sensor Atg1 to the PAS, bringing it into proximity to its binding partner Atg17.	Aminosalicylic Acid	93-96	RAB1A, member RAS oncogene family	Homo sapiens	28-32	
25800837-4	2015	At the pre-autophagosomal structure (PAS), the localization of the serine/threonine kinase Atg1 was affected in the ypt1-2 mutant.	Aminosalicylic Acid	37-40	RAB1A, member RAS oncogene family	Homo sapiens	116-120	
23716696-7	2013	We propose that Ypt1 regulates Atg9 vesicle tethering by modulating the delivery of Atg1 to the PAS.	Aminosalicylic Acid	96-99	RAB1A, member RAS oncogene family	Homo sapiens	16-20	
22509044-4	2012	Here, we identify Atg11, the preautophagosomal structure (PAS) organizer, as a downstream effector of Ypt1 and show that the Ypt1-Atg11 interaction is required for PAS assembly under normal growth conditions.	Aminosalicylic Acid	58-61	RAB1A, member RAS oncogene family	Homo sapiens	102-106	
22717525-6	2012	Now, a recent report shows that Atg11 is a Trs85-specific effector of the Rab Ypt1, and may act as a classic coiled-coil membrane tether that targets Atg9-containing membranes to the PAS.	Aminosalicylic Acid	183-186	RAB1A, member RAS oncogene family	Homo sapiens	74-77	
22717525-6	2012	Now, a recent report shows that Atg11 is a Trs85-specific effector of the Rab Ypt1, and may act as a classic coiled-coil membrane tether that targets Atg9-containing membranes to the PAS.	Aminosalicylic Acid	183-186	RAB1A, member RAS oncogene family	Homo sapiens	78-82	
22669536-6	2012	In our recent paper, we identify Atg11, a bona fide phagophore assembly site (PAS) component, as a downstream effector of Ypt1.	Aminosalicylic Acid	78-81	RAB1A, member RAS oncogene family	Homo sapiens	122-126	
22669536-7	2012	Moreover, we show that three components of a GTPase module--the Ypt1 activator, Trs85-containing TRAPP complex, Ypt1, and the Atg11 effector--interact on the PAS and are required for PAS formation during selective autophagy.	Aminosalicylic Acid	158-161	RAB1A, member RAS oncogene family	Homo sapiens	64-68	
22669536-7	2012	Moreover, we show that three components of a GTPase module--the Ypt1 activator, Trs85-containing TRAPP complex, Ypt1, and the Atg11 effector--interact on the PAS and are required for PAS formation during selective autophagy.	Aminosalicylic Acid	158-161	RAB1A, member RAS oncogene family	Homo sapiens	112-116	
22669536-7	2012	Moreover, we show that three components of a GTPase module--the Ypt1 activator, Trs85-containing TRAPP complex, Ypt1, and the Atg11 effector--interact on the PAS and are required for PAS formation during selective autophagy.	Aminosalicylic Acid	183-186	RAB1A, member RAS oncogene family	Homo sapiens	64-68	
22669536-7	2012	Moreover, we show that three components of a GTPase module--the Ypt1 activator, Trs85-containing TRAPP complex, Ypt1, and the Atg11 effector--interact on the PAS and are required for PAS formation during selective autophagy.	Aminosalicylic Acid	183-186	RAB1A, member RAS oncogene family	Homo sapiens	112-116	
22509044-4	2012	Here, we identify Atg11, the preautophagosomal structure (PAS) organizer, as a downstream effector of Ypt1 and show that the Ypt1-Atg11 interaction is required for PAS assembly under normal growth conditions.	Aminosalicylic Acid	58-61	RAB1A, member RAS oncogene family	Homo sapiens	125-129	
22509044-6	2012	Finally, we show that Ypt1 and Trs85 interact on Atg9-containing membranes, which serve as a source for the membrane component of the PAS.	Aminosalicylic Acid	134-137	RAB1A, member RAS oncogene family	Homo sapiens	22-26	
20375281-6	2010	The Trs85 subunit of the TRAPPIII complex directs this Ypt1 GEF to the phagophore assembly site (PAS) that is involved in autophagosome formation.	Aminosalicylic Acid	97-100	RAB1A, member RAS oncogene family	Homo sapiens	55-59	
20375281-7	2010	Consistent with the observation that a Ypt1 GEF is directed to the PAS, we find that Ypt1 is essential for autophagy.	Aminosalicylic Acid	67-70	RAB1A, member RAS oncogene family	Homo sapiens	39-43