PMID-sentid Pub_year Sent_text comp_official_name comp_offsetprotein_name organism prot_offset 16394133-11 2005 Both methods produced quantitatively close results; (125)I-TFO-GA with multiple nuclear targets produced on average 1.93 times more gamma-H2AX foci per cell and generated 1.96 times increase in gamma-H2AX antibody staining signal than (125)I-TFO-HPRT with a single target. tfo 59-62 hypoxanthine phosphoribosyltransferase 1 Homo sapiens 246-250 16394133-9 2005 Here we applied this method to evaluate the intracellular DNA damage produced by two (125)I-TFOs, the first targeted to the single-copy HPRT gene ((125)I-TFO-HPRT) and second to a multicopy repeated sequence (GA)(n) that occurs almost 7000 times in the human genome ((125)I-TFO-GA). tfo 92-95 hypoxanthine phosphoribosyltransferase 1 Homo sapiens 136-140 16394133-9 2005 Here we applied this method to evaluate the intracellular DNA damage produced by two (125)I-TFOs, the first targeted to the single-copy HPRT gene ((125)I-TFO-HPRT) and second to a multicopy repeated sequence (GA)(n) that occurs almost 7000 times in the human genome ((125)I-TFO-GA). tfo 92-95 hypoxanthine phosphoribosyltransferase 1 Homo sapiens 158-162 10481023-1 1999 We studied the stability of a DNA triplex resulting from the binding of a 38 nt long purine motif triplex-forming oligonucleotide (TFO) to a covalently closed plasmid containing a target sequence from the human HPRT gene. tfo 131-134 hypoxanthine phosphoribosyltransferase 1 Homo sapiens 211-215 9004758-3 1996 Decay of 125I in the bound TFO was shown to cause sequence-specific double strand breaks (DSB) in the target HPRT sequence cloned into plasmid DNA. tfo 27-30 hypoxanthine phosphoribosyltransferase 1 Homo sapiens 109-113 22914677-3 2012 We have engineered a TFO, TFO27, to target the genomic Hypoxanthine-guanine phosphoribosyltransferase (HPRT) locus to define the mutagenic potential of such structures at genomic DNA. tfo 21-24 hypoxanthine phosphoribosyltransferase 1 Homo sapiens 55-101 22914677-3 2012 We have engineered a TFO, TFO27, to target the genomic Hypoxanthine-guanine phosphoribosyltransferase (HPRT) locus to define the mutagenic potential of such structures at genomic DNA. tfo 21-24 hypoxanthine phosphoribosyltransferase 1 Homo sapiens 103-107 20725628-3 2010 We designed TFO sequences with DNA and 2"-O-methyl RNA backbones conjugated to psoralen by 2-carbon linkers and examined their ability to bind and target damage to model DNA duplexes corresponding to sequences within the human HPRT gene. tfo 12-15 hypoxanthine phosphoribosyltransferase 1 Homo sapiens 227-231 18435621-1 2008 A triplex-forming oligonucleotide (TFO), HPRT3, conjugated to a psoralen derivative, was designed to target a psoralen reaction site within the HPRT gene. tfo 35-38 hypoxanthine phosphoribosyltransferase 1 Homo sapiens 41-45