PMID-sentid Pub_year Sent_text comp_official_name comp_offsetprotein_name organism prot_offset 26641274-3 2016 We propose that the electron-withdrawing properties of -CHO and -COOH in 5fC and 5caC increase N3 acidity, leading to weakened hydrogen bonding and reduced base pair stability relative to C, 5mC, and 5hmC, thereby facilitating the selective recognition of 5fC and 5caC by TDG. Hydrogen 127-135 thymine DNA glycosylase Homo sapiens 272-275 23337108-2 2013 In the previously solved structure of TDG in complex with DNA containing 5caC, the side chain of asparagine 157 (N157) contacts the 5-carboxyl moiety of 5caC via a weak hydrogen bond. Hydrogen 169-177 thymine DNA glycosylase Homo sapiens 38-41 22962365-8 2012 TDG allows hydrogen-bonding interactions to both T/U-based (5hmU) and C-based (5caC) modifications, thus enabling its activity on a wider range of substrates. Hydrogen 11-19 thymine DNA glycosylase Homo sapiens 0-3 20852254-8 2010 Molecular modeling and molecular dynamics simulations reveal distinct hydrogen-bonding patterns in the active site of E. coli MUG that account for the specificity differences between E. coli MUG and human thymine DNA glycosylase as well as that between the wild type MUG and the Asn-140 and Ser-23 mutants. Hydrogen 70-78 thymine DNA glycosylase Homo sapiens 205-228 17965616-6 2006 DNA hypermethylation of TDG in the MM cell lines leads to lower gene expression levels that results in less efficient DNA repair activity in response to hydrogen peroxideinduced DNA damage. Hydrogen 153-161 thymine DNA glycosylase Homo sapiens 24-27