PMID-sentid Pub_year Sent_text comp_official_name comp_offsetprotein_name organism prot_offset 30156415-3 2018 First, the DMPC/PSM/cholesterol bilayer features favorable interactions of cholesterol with DMPC and, particularly, PSM lipids, which are supported by hydrogen bonds. Hydrogen 151-159 folate hydrolase 1 Homo sapiens 16-19 34926886-6 2021 The computational results suggest that the chemical nature of inhibitors affects the binding mode and their association with PSMA is primarily dominated by hydrogen bonding, salt bridge, electrostatic, and pi-pi interactions. Hydrogen 156-164 folate hydrolase 1 Homo sapiens 125-129 34667573-1 2021 Polymerization-induced self-assembly (PISA) is exploited to design hydrogen-bonded poly(stearyl methacrylate)-poly(benzyl methacrylate) (PSMA-PBzMA) worm gels in n-dodecane. Hydrogen 67-75 folate hydrolase 1 Homo sapiens 137-141 34667573-4 2021 This is achieved via two complementary routes: (i) an in situ approach using binary mixtures of acid- and ester-capped PSMA stabilizer chains during PISA or (ii) a post-polymerization processing strategy using a thermally-induced worm-to-sphere transition to mix acid- and ester-functionalized spheres at 110 C that fuse to form worms on cooling to 20 C. SAXS and rheology studies of these hydrogen-bonded worm gels provide detailed insights into their inter-worm interactions and physical behavior, respectively. Hydrogen 392-400 folate hydrolase 1 Homo sapiens 119-123 35467350-6 2022 The docking calculations and molecular dynamics simulations showed how 1 enters the PSMA funnel region and how pharmacophore Glu-urea-Lys interacts with the arginine patch, the S1", and S1 subpockets by forming hydrogen and van der Waals bonds. Hydrogen 211-219 folate hydrolase 1 Homo sapiens 84-88 30156415-3 2018 First, the DMPC/PSM/cholesterol bilayer features favorable interactions of cholesterol with DMPC and, particularly, PSM lipids, which are supported by hydrogen bonds. Hydrogen 151-159 folate hydrolase 1 Homo sapiens 116-119 30156415-5 2018 Further analysis shows that about 60% of PSM molecules form hydrogen bonds with other PSM or cholesterol molecules and, to a lesser degree, with DMPC lipids. Hydrogen 60-68 folate hydrolase 1 Homo sapiens 41-44 30156415-5 2018 Further analysis shows that about 60% of PSM molecules form hydrogen bonds with other PSM or cholesterol molecules and, to a lesser degree, with DMPC lipids. Hydrogen 60-68 folate hydrolase 1 Homo sapiens 86-89 27984827-3 2017 The zwitterionic fluorescent polymer bound to bacteria through ionic complexes between anionic groups on the bacterial surface and cationic BOD/BE-PSM groups after 1h incubation. Hydrogen 164-166 folate hydrolase 1 Homo sapiens 147-150 28496522-2 2016 This PSMA macro-CTA was then utilised as a stabiliser block for the RAFT dispersion polymerisation of a highly polar monomer, N-2-(methacryloyloxy)ethyl pyrrolidone (NMEP), in n-dodecane at 90 C. 1H NMR studies confirmed that the rate of NMEP polymerisation was significantly faster than that of a non-polar monomer (benzyl methacrylate, BzMA) under the same conditions. Hydrogen 197-199 folate hydrolase 1 Homo sapiens 5-9 26460595-6 2016 This variability stems in part from the fact that the effector/GCPII interfaces generally encompass isolated areas of nonpolar residues within the entrance funnel and resulting van der Waals contacts lack the directionality typical for hydrogen bonding interactions. Hydrogen 236-244 folate hydrolase 1 Homo sapiens 63-68