PMID-sentid Pub_year Sent_text comp_official_name comp_offsetprotein_name organism prot_offset 15317462-8 2004 Hydropathic analysis of the energetic contributions using HINT indicates a significant improvement of the correlation between HINT scores and the experimentally determined binding constants when the appropriate bridging water molecules are taken into account. Water 220-225 histidine triad nucleotide binding protein 1 Homo sapiens 58-62 24076743-6 2013 In particular, a detailed analysis of water molecules at the interfaces of high-resolution (<=2.30 A) X-ray crystal structures of protein-protein complexes, where 140 are biological protein-protein complex structures and 112 include non-biological protein-protein interfaces, was carried out using modeling tools based on the HINT forcefield. Water 38-43 histidine triad nucleotide binding protein 1 Homo sapiens 329-333 15317462-8 2004 Hydropathic analysis of the energetic contributions using HINT indicates a significant improvement of the correlation between HINT scores and the experimentally determined binding constants when the appropriate bridging water molecules are taken into account. Water 220-225 histidine triad nucleotide binding protein 1 Homo sapiens 126-130 15317462-10 2004 HINT was shown to be able to map quantitatively the contribution of individual structural waters to binding energy. Water 90-96 histidine triad nucleotide binding protein 1 Homo sapiens 0-4 11349819-3 2001 Particular emphasis is placed on: (1) demonstrating the relationship between the total empirical HINT score and free energy of association, deltaGinteraction; (2) showing that the HINT hydrophobic-polar interaction sub-score represents the energy cost of desolvation upon binding for interacting biomolecules; and (3) a new methodology for treating constrained water molecules as discrete independent small ligands. Water 361-366 histidine triad nucleotide binding protein 1 Homo sapiens 97-101 11349819-3 2001 Particular emphasis is placed on: (1) demonstrating the relationship between the total empirical HINT score and free energy of association, deltaGinteraction; (2) showing that the HINT hydrophobic-polar interaction sub-score represents the energy cost of desolvation upon binding for interacting biomolecules; and (3) a new methodology for treating constrained water molecules as discrete independent small ligands. Water 361-366 histidine triad nucleotide binding protein 1 Homo sapiens 180-184 33276572-0 2020 Metal-Polymer Complexes of Gallium/Gallium-68 with Copolymers of N-Vinylpyrrolidonewith N-Vinylformamideand N-Vinyliminodiacetic Acid: A Hint for Radiolabeling of Water-Soluble Synthetic Flexible Chain Macromolecules. Water 163-168 histidine triad nucleotide binding protein 1 Homo sapiens 137-141 2343089-4 1990 However, a hint at the group of halogenated hydrocarbons is only possible, if additional information about miscibility with water is accessible. Water 124-129 histidine triad nucleotide binding protein 1 Homo sapiens 11-15 28452756-4 2017 The data hint at a decreased electrostatic interaction at higher pressure, presumably due to the increase of the dielectric constant of water by 3% and the decrease of the free volume at 300 bar. Water 136-141 histidine triad nucleotide binding protein 1 Homo sapiens 9-13 27092011-3 2015 The findings hint that the air-water interface is a locale for synthetic reactions. Water 31-36 histidine triad nucleotide binding protein 1 Homo sapiens 13-17