PMID-sentid Pub_year Sent_text comp_official_name comp_offsetprotein_name organism prot_offset 1959444-2 1991 A hapten containing a benzyl ammonium group was used to elicit a specific base, a carboxylate, in the combining site of an antibody that catalysed a beta-elimination reaction. carboxylate 82-93 amyloid beta precursor protein Homo sapiens 147-153 15964569-1 2005 The strong pH dependence of A beta oligomerization could arise from favorable intermolecular charge-charge interactions between His and carboxylate groups, or, alternatively, by mutual electrostatic repulsion of peptide molecules. carboxylate 136-147 amyloid beta precursor protein Homo sapiens 28-34 12473188-11 2002 NMR analysis showed that deprotonation of the C-terminal carboxylate group in A beta(12-24) triggered the aggregate formation, and the transition from a random coil to a beta-conformation in the C-terminal region of V18-V24 was detected on analysis of the (3)Ja(N) coupling constant in the pH range of 2.2 to 3.0. carboxylate 57-68 amyloid beta precursor protein Homo sapiens 78-84 7823029-2 1994 For aspartate, the unbalanced position of its amino group between a pair of carboxylates allows its occasional biorecognition as a beta-rather than as an alpha-amino acid, whereas for proline and its homologs, their cyclic arrangement may allow the imino group, without its being replicated, to be sensed analogously as falling at either of two distances from the single carboxylate group. carboxylate 76-87 amyloid beta precursor protein Homo sapiens 129-135 33802596-0 2021 Swapping the Positions in a Cross-Strand Lateral Ion-Pairing Interaction between Ammonium- and Carboxylate-Containing Residues in a beta-Hairpin. carboxylate 95-106 amyloid beta precursor protein Homo sapiens 130-136 33802596-3 2021 Herein, we swapped the position of ammonium- and carboxylate-containing residues with different side-chain lengths in a cross-strand lateral ion-pairing interaction in a beta-hairpin. carboxylate 49-60 amyloid beta precursor protein Homo sapiens 168-174 2922053-5 1989 The antibody-catalysed reaction, a beta-elimination reaction, exhibits saturation kinetics, substrate specificity, competitive inhibition by hapten, and specific inactivation by a reagent that modifies carboxylate residues. carboxylate 202-213 amyloid beta precursor protein Homo sapiens 33-39 30637529-5 2019 We find a pronounced difference on the molecular level in the interaction behavior with free carboxylate groups of the Abeta oligomer: Li+ forms stable bridged interactions, whereas K+ interacts more transiently and lacks bridging. carboxylate 93-104 amyloid beta precursor protein Homo sapiens 119-124