PMID-sentid	Pub_year	Sent_text		comp_official_name	comp_offsetprotein_name	organism	prot_offset
23097434-7	2013	Given that N-myristoylation of the Nef protein occurs in the conserved motifs and is critical for viral pathogenesis, these observations predict that the lipopeptide-specific T cell response is difficult for viruses to avoid by simply introducing amino acid mutations.	Nitrogen	11-12	S100 calcium binding protein B	Homo sapiens	35-38	
23549797-8	2013	Using an arbitrary cut off value, S100B-positive CSF was detected in 2.5% of the CNS-N group and in 50% of the CNS+N group (p<0.05).	Nitrogen	82-83	S100 calcium binding protein B	Homo sapiens	34-39	
23549797-8	2013	Using an arbitrary cut off value, S100B-positive CSF was detected in 2.5% of the CNS-N group and in 50% of the CNS+N group (p<0.05).	Nitrogen	85-86	S100 calcium binding protein B	Homo sapiens	34-39	
21653836-6	2011	Furthermore, the population size of N-myristoylated Nef peptide-specific T cells was found to increase significantly in the circulation of SIV-infected monkeys.	Nitrogen	36-37	S100 calcium binding protein B	Homo sapiens	52-55	
21653836-3	2011	This biochemical reaction, referred to as N-myristoylation, assists its targeting to the plasma membrane, thereby supporting the immunosuppressive activity proposed for the Nef protein.	Nitrogen	42-43	S100 calcium binding protein B	Homo sapiens	173-176	
21653836-4	2011	In this study, we show that the host immunity is equipped with CTLs capable of sensing N-myristoylation of the Nef protein.	Nitrogen	87-88	S100 calcium binding protein B	Homo sapiens	111-114	
21653836-5	2011	A rhesus macaque CD8(+) T cell line was established that specifically recognized N-myristoylated, but not unmodified, peptides of the Nef protein.	Nitrogen	81-82	S100 calcium binding protein B	Homo sapiens	134-137	
7811531-14	1994	Taken together, these results suggest that N-myristoylation of Nef affects its association with both membranes and cytoskeleton.	Nitrogen	43-44	S100 calcium binding protein B	Homo sapiens	63-66	
8013286-10	1994	These N-dealkylated metabolites were also present in pooled human plasma samples along with nefazodone, OH-Nef, and an unknown metabolite that was present in plasma in large amounts relative to nefazodone and OH-Nef.	Nitrogen	6-7	S100 calcium binding protein B	Homo sapiens	107-110	
8013286-10	1994	These N-dealkylated metabolites were also present in pooled human plasma samples along with nefazodone, OH-Nef, and an unknown metabolite that was present in plasma in large amounts relative to nefazodone and OH-Nef.	Nitrogen	6-7	S100 calcium binding protein B	Homo sapiens	212-215	
32269076-4	2020	The primate classical MHC class I allomorphs, Mamu-B*098 and Mamu-B*05104, are capable of binding the N-myristoylated 5-mer (C14-Gly-Gly-Ala-Ile-Ser) or 4-mer (C14-Gly-Gly-Ala-Ile) lipopeptides derived from the N-myristoylated SIV Nef protein, respectively, and of activating lipopeptide antigen-specific cytotoxic T lymphocytes.	Nitrogen	102-103	S100 calcium binding protein B	Homo sapiens	231-234	
32269076-4	2020	The primate classical MHC class I allomorphs, Mamu-B*098 and Mamu-B*05104, are capable of binding the N-myristoylated 5-mer (C14-Gly-Gly-Ala-Ile-Ser) or 4-mer (C14-Gly-Gly-Ala-Ile) lipopeptides derived from the N-myristoylated SIV Nef protein, respectively, and of activating lipopeptide antigen-specific cytotoxic T lymphocytes.	Nitrogen	211-212	S100 calcium binding protein B	Homo sapiens	231-234	
31597760-9	2019	Residues 12-39 near the N-terminus of Nef have been described as interaction platform for the Nef-associated kinase complex (NAKC) and were recently identified as essential determinants for a broad range of Nef activities.	Nitrogen	24-25	S100 calcium binding protein B	Homo sapiens	38-41	
31597760-9	2019	Residues 12-39 near the N-terminus of Nef have been described as interaction platform for the Nef-associated kinase complex (NAKC) and were recently identified as essential determinants for a broad range of Nef activities.	Nitrogen	24-25	S100 calcium binding protein B	Homo sapiens	94-97	
31043477-5	2019	We, in this study, demonstrate that the MHC class I allele, Mamu-B*05104, binds the N-myristoylated 4-mer peptide (C14-Gly-Gly-Ala-Ile) derived from the viral Nef protein for its presentation to CTLs.	Nitrogen	84-85	S100 calcium binding protein B	Homo sapiens	159-162