PMID-sentid Pub_year Sent_text comp_official_name comp_offsetprotein_name organism prot_offset 21156812-0 2011 Comparison of in vitro metabolism of ticlopidine by human cytochrome P450 2B6 and rabbit cytochrome P450 2B4. Ticlopidine 37-48 cytochrome P450 2B4 Oryctolagus cuniculus 89-108 21156812-1 2011 A recent X-ray crystal structure of a rabbit cytochrome P450 2B4 (CYP2B4)-ticlopidine complex indicated that the compound could be modeled with either the thiophene or chlorophenyl group oriented toward the heme prosthetic group. Ticlopidine 74-85 cytochrome P450 2B4 Oryctolagus cuniculus 45-64 21156812-1 2011 A recent X-ray crystal structure of a rabbit cytochrome P450 2B4 (CYP2B4)-ticlopidine complex indicated that the compound could be modeled with either the thiophene or chlorophenyl group oriented toward the heme prosthetic group. Ticlopidine 74-85 cytochrome P450 2B4 Oryctolagus cuniculus 66-72 21156812-3 2011 To evaluate the predictive value of these findings, the oxidation of ticlopidine by reconstituted CYP2B4 was studied and compared with CYP2B6, in which the thiophene portion of the molecule likely orients toward the heme. Ticlopidine 69-80 cytochrome P450 2B4 Oryctolagus cuniculus 98-104 21156812-7 2011 However, the amplitude (R(max)) of M1 and M6 formation was 4 to 5 times higher for CYP2B6 than CYP2B4, indicating a greater residence time of ticlopidine with its thiophene ring closer to heme in CYP2B6. Ticlopidine 142-153 cytochrome P450 2B4 Oryctolagus cuniculus 95-101 21156812-9 2011 Overall, the results suggest that the preferential orientation of ticlopidine in the active site of CYP2B4 predicted by X-ray crystallography and NMR studies is unproductive and that ticlopidine likely reorients within CYP2B4 to a more productive mode. Ticlopidine 66-77 cytochrome P450 2B4 Oryctolagus cuniculus 100-106 21156812-9 2011 Overall, the results suggest that the preferential orientation of ticlopidine in the active site of CYP2B4 predicted by X-ray crystallography and NMR studies is unproductive and that ticlopidine likely reorients within CYP2B4 to a more productive mode. Ticlopidine 183-194 cytochrome P450 2B4 Oryctolagus cuniculus 219-225