PMID-sentid	Pub_year	Sent_text		comp_official_name	comp_offsetprotein_name	organism	prot_offset
20472512-5	2010	In addition, we performed a genetic screen for interactions with rad9Delta that confer sensitivity to 0.01% MMS.	Methyl Methanesulfonate	108-111	chromatin-binding protein RAD9	Saccharomyces cerevisiae S288C	65-69	
2664461-4	1989	Our studies with the rad9 delta mutation show that RAD9 plays a role in the cell cycle arrest of methyl methanesulfonate-treated cells and is absolutely required for the cell cycle arrest in the temperature-sensitive cdc9 mutant, which is defective in DNA ligase.	Methyl Methanesulfonate	97-120	chromatin-binding protein RAD9	Saccharomyces cerevisiae S288C	21-25	
2664461-4	1989	Our studies with the rad9 delta mutation show that RAD9 plays a role in the cell cycle arrest of methyl methanesulfonate-treated cells and is absolutely required for the cell cycle arrest in the temperature-sensitive cdc9 mutant, which is defective in DNA ligase.	Methyl Methanesulfonate	97-120	chromatin-binding protein RAD9	Saccharomyces cerevisiae S288C	51-55	
24278365-3	2013	In this study we investigate a possible genetic interaction between SGS1 and RAD9 in the cellular response to methyl methane sulphonate (MMS) induced damage and compare this with the genetic interaction between SGS1 and RAD24.	Methyl Methanesulfonate	110-135	chromatin-binding protein RAD9	Saccharomyces cerevisiae S288C	77-81	
24278365-3	2013	In this study we investigate a possible genetic interaction between SGS1 and RAD9 in the cellular response to methyl methane sulphonate (MMS) induced damage and compare this with the genetic interaction between SGS1 and RAD24.	Methyl Methanesulfonate	137-140	chromatin-binding protein RAD9	Saccharomyces cerevisiae S288C	77-81	
24278365-6	2013	Specifically, we show a strong synergistic functionality between SGS1 and RAD9 for recovery from MMS induced damage and for suppression of gross chromosomal rearrangements, which is not the case for SGS1 and RAD24.	Methyl Methanesulfonate	97-100	chromatin-binding protein RAD9	Saccharomyces cerevisiae S288C	74-78	
24278365-9	2013	Thus, whereas earlier studies have documented a Top3-independent role of Sgs1 for an HU-induced checkpoint response, we show here that upon MMS treatment, Sgs1 and Top3 together define a minor but parallel pathway to that of Rad9.	Methyl Methanesulfonate	140-143	chromatin-binding protein RAD9	Saccharomyces cerevisiae S288C	225-229	
11156979-3	2001	tof1 and rad9 conferred synergistic sensitivity to MMS, UV, and HU, and the double mutant was incapable of slowing S phase in response to MMS, inducing RNR3 transcription in response to UV, and phosphorylating Rad53p in response to HU.	Methyl Methanesulfonate	51-54	chromatin-binding protein RAD9	Saccharomyces cerevisiae S288C	9-13	
15466434-3	2005	Here we show that CCR4 and CAF1, which together encode the major cytoplasmic mRNA deadenylase complex, have complex genetic interactions with the checkpoint genes DUN1, MRC1, RAD9, and RAD17 in response to DNA-damaging agents hydroxyurea (HU) and methylmethane sulfonate (MMS).	Methyl Methanesulfonate	247-270	chromatin-binding protein RAD9	Saccharomyces cerevisiae S288C	175-179	
15466434-3	2005	Here we show that CCR4 and CAF1, which together encode the major cytoplasmic mRNA deadenylase complex, have complex genetic interactions with the checkpoint genes DUN1, MRC1, RAD9, and RAD17 in response to DNA-damaging agents hydroxyurea (HU) and methylmethane sulfonate (MMS).	Methyl Methanesulfonate	272-275	chromatin-binding protein RAD9	Saccharomyces cerevisiae S288C	175-179	
17057245-5	2006	Epistatic analysis showed that rad9 is synergistic to both mms2 and rev3 with respect to killing by methyl methanesulfonate (MMS), and the triple mutant is nearly as sensitive as the rad18 single mutant.	Methyl Methanesulfonate	100-123	chromatin-binding protein RAD9	Saccharomyces cerevisiae S288C	31-35	
17057245-5	2006	Epistatic analysis showed that rad9 is synergistic to both mms2 and rev3 with respect to killing by methyl methanesulfonate (MMS), and the triple mutant is nearly as sensitive as the rad18 single mutant.	Methyl Methanesulfonate	125-128	chromatin-binding protein RAD9	Saccharomyces cerevisiae S288C	31-35	
12172964-4	2002	RAD54 and RNR2 reporter activity in response to the DNA damaging agent, methyl methanesulphonate, was measured in ddc1-Delta, rad9-Delta, ddc1-Delta/rad9-Delta, dun1-Delta, crt1-Delta and mbp1-Delta mutants and was compared with that of the wild type.	Methyl Methanesulfonate	72-96	chromatin-binding protein RAD9	Saccharomyces cerevisiae S288C	126-130	
12172964-4	2002	RAD54 and RNR2 reporter activity in response to the DNA damaging agent, methyl methanesulphonate, was measured in ddc1-Delta, rad9-Delta, ddc1-Delta/rad9-Delta, dun1-Delta, crt1-Delta and mbp1-Delta mutants and was compared with that of the wild type.	Methyl Methanesulfonate	72-96	chromatin-binding protein RAD9	Saccharomyces cerevisiae S288C	149-153	
10675560-5	2000	Epistasis analysis also indicated that YKU80 and RAD9/RAD24 function in the same pathway for repair of lesions caused by MMS and gamma-irradiation.	Methyl Methanesulfonate	121-124	chromatin-binding protein RAD9	Saccharomyces cerevisiae S288C	49-53	
9367985-2	1997	We have shown that after a pulse of DNA damage in G1 with the alkylating agent MMS, there is also a MEC1-, RAD53-, and RAD9-dependent delay in G1.	Methyl Methanesulfonate	79-82	chromatin-binding protein RAD9	Saccharomyces cerevisiae S288C	119-123