PMID-sentid Pub_year Sent_text comp_official_name comp_offsetprotein_name organism prot_offset 14768938-4 2003 Because AID is capable of deaminating deoxy-cytidine (dC) to deoxy-uracil (dU), it might directly induce nicks (single strand DNA breaks) and also DNA-DSBs via a U-DNA glycosylase mediated base excision repair pathway ("DNA-substrate model"). du 75-77 activation induced cytidine deaminase Homo sapiens 8-11 23181381-3 2013 AID displays a mutagenic activity by catalyzing targeted deamination of deoxycytidine (dC) residues in DNA resulting in dU:dG mismatches, which are processed into point-mutations in SHM or double-strand breaks (DSBs) in CSR. du 120-122 activation induced cytidine deaminase Homo sapiens 0-3 20082153-5 2010 Indeed, the sequence of the switch mu region is designed to maximize AID access to increase the abundance of clustered dU bases. du 119-121 activation induced cytidine deaminase Homo sapiens 69-72 18370922-4 2008 AID activity converts several dC bases to dU bases in each S region, and the dU bases are then excised by the uracil DNA glycosylase UNG; the resulting abasic sites are nicked by apurinic/apyrimidinic endonuclease (APE). du 42-44 activation induced cytidine deaminase Homo sapiens 0-3 22556412-7 2012 The inhibition of intrinsic AID enzymatic activity by Fe(2+) was specific, as shown by lack of inhibition of AID-mediated dC deamination by other bivalent metal ions, such as Zn(2+), Mn(2+), Mg(2+), or Ni(2+), and the inability of Fe(2+) to inhibit UNG-mediated dU excision. du 262-264 activation induced cytidine deaminase Homo sapiens 28-31 15710654-1 2005 Activation-induced cytidine deaminase deaminates cytosine to uracil (dU) in DNA, which leads to mutations at C:G basepairs in immunoglobulin genes during somatic hypermutation. du 69-71 activation induced cytidine deaminase Homo sapiens 0-37 12651944-6 2003 AID catalyzes dC --> dU deamination activity most avidly on double-stranded DNA substrates containing a small "transcription-like" single-stranded DNA bubble, suggesting a targeting mechanism for this enigmatic enzyme during somatic hypermutation. du 24-26 activation induced cytidine deaminase Homo sapiens 0-3 11994423-2 2002 As AID is capable of deaminating deoxy-cytidine (dC) to deoxy-uracil (dU), it might induce nicks (single strand DNA breaks) and also DNA DSBs via a U-DNA glycosylase-mediated base excision repair pathway ("DNA-substrate model"). du 70-72 activation induced cytidine deaminase Homo sapiens 3-6